Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AL139156.1-201ENST00000412785 841 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 OR6C66P-201ENST00000414917 930 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 HMGB1P9-201ENST00000429856 646 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 RPS29P15-201ENST00000458329 171 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU7-182P-201ENST00000459009 62 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC026801.1-201ENST00000497178 464 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC104806.1-201ENST00000508720 308 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC107393.1-201ENST00000512403 346 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 Y_RNA.655-201ENST00000515919 96 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU1-86P-201ENST00000516108 154 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU1-107P-201ENST00000516617 154 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-572P-201ENST00000516724 80 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 SNORA31.19-201ENST00000517079 126 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 GLYCAM1-201ENST00000546596 285 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 EIF1P4-201ENST00000572664 335 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 MIR4703-201ENST00000577728 79 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC078899.2-201ENST00000595282 212 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 BNIP3P30-201ENST00000601184 574 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC012493.3-201ENST00000604494 112 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL158032.1-201ENST00000605401 106 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 AP001330.5-201ENST00000607176 411 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC007684.1-201ENST00000609671 477 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC024940.5-201ENST00000622889 474 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC124864.2-201ENST00000624736 186 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC080128.1-201ENST00000474389 1917 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 CDC27P3-201ENST00000635418 1910 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 OR4G2P-201ENST00000328113 903 ntBASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 Y_RNA.140-201ENST00000363474 103 ntBASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 Y_RNA.338-201ENST00000365320 114 ntBASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 Y_RNA.409-201ENST00000383990 98 ntBASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-658P-201ENST00000384606 106 ntBASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-780P-201ENST00000391030 104 ntBASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-387P-201ENST00000411331 105 ntBASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 CYCSP33-201ENST00000414485 327 ntBASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC073464.1-201ENST00000429823 534 ntBASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL596276.1-201ENST00000434465 418 ntBASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC002486.1-201ENST00000435098 391 ntBASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 NDUFB1P2-201ENST00000449477 176 ntBASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC019235.1-201ENST00000503847 207 ntBASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-720P-201ENST00000516363 108 ntBASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC104383.1-201ENST00000530297 370 ntBASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC006199.1-201ENST00000548728 219 ntBASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC025678.1-201ENST00000567861 338 ntBASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC091152.3-201ENST00000604227 325 ntBASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 OR5AK4P-201ENST00000635912 903 ntBASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.86□□□□□ -2.11
TMX2-CTNND1H3BSU7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 Y_RNA.296-201ENST00000364930 108 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-395P-201ENST00000365662 106 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 MIR17-201ENST00000385012 84 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 SNORA46.1-201ENST00000391069 153 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-903P-201ENST00000391270 109 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 CIR1P3-201ENST00000405137 479 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU4-55P-201ENST00000410731 137 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL353621.1-201ENST00000418219 243 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 CYCSP49-201ENST00000420810 319 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 C8orf59P1-201ENST00000429930 303 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL606489.2-201ENST00000433886 234 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC073415.1-201ENST00000449240 153 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 PPP1R2P5-201ENST00000457256 603 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 GMFBP1-201ENST00000467831 427 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 EIF4EP3-201ENST00000498782 656 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 SCARNA17.1-201ENST00000516211 143 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 SNORA40.12-201ENST00000516329 111 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 SCARNA17.2-201ENST00000516334 143 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-143P-201ENST00000516942 93 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 AK6P1-201ENST00000540219 478 ntBASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.85□□□□□ -2.11
TMX2-CTNND1H3BSU7 MTCO3P23-201ENST00000561363 289 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms