Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AP005435.4-201ENST00000529514 284 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 AC023050.3-201ENST00000541142 333 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 TRAV32-201ENST00000553993 340 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 MIR3915-201ENST00000578518 97 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 Z99289.3-201ENST00000605586 594 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SMKR1H3BMG3 RMST_6.1-201ENST00000611980 203 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 uc_338.11-201ENST00000619132 160 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 AC004777.1-201ENST00000624317 287 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 AC006386.2-201ENST00000624491 75 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 AC012005.1-201ENST00000624575 75 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 AC007494.3-201ENST00000624660 743 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SMKR1H3BMG3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SMKR1H3BMG3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
SMKR1H3BMG3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
SMKR1H3BMG3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.43□□□□□ -2.18
SMKR1H3BMG3 RNU4-15P-201ENST00000362613 141 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 RNU4-21P-201ENST00000362802 126 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 SNORD32B-201ENST00000364460 84 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SMKR1H3BMG3 RNU6-1029P-201ENST00000384109 107 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 RNU6-160P-201ENST00000384591 107 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 MIR1-2-201ENST00000384961 85 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 SNORA48.1-201ENST00000390879 135 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 SNORA48.2-201ENST00000390926 124 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 AL357139.1-201ENST00000407792 426 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 RNU2-20P-201ENST00000410425 191 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 RNU4-46P-201ENST00000410818 138 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 RNU6-293P-201ENST00000411259 106 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.43□□□□□ -2.18
SMKR1H3BMG3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.43□□□□□ -2.18
SMKR1H3BMG3 AL035666.1-201ENST00000446195 348 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 SNORD42A-201ENST00000459584 64 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 AC087884.1-201ENST00000469738 328 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 AC132942.1-201ENST00000486753 483 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 MTCO3P7-201ENST00000510008 774 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.43□□□□□ -2.18
SMKR1H3BMG3 LRRC34P2-201ENST00000514850 553 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SMKR1H3BMG3 MIR5089-201ENST00000580047 84 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 MIR3136-201ENST00000583498 78 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 AC008752.3-201ENST00000588113 712 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 BNIP3P16-201ENST00000589779 534 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.43□□□□□ -2.18
SMKR1H3BMG3 AC245014.2-201ENST00000603689 287 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 AC010900.2-201ENST00000604508 210 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 AL034555.1-201ENST00000604816 211 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 AC246785.4-201ENST00000605374 287 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 AC008945.2-201ENST00000606056 604 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 AC006566.1-201ENST00000608943 513 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 AC104073.3-201ENST00000610942 955 ntBASIC1.43□□□□□ -2.18
SMKR1H3BMG3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.43□□□□□ -2.18
SMKR1H3BMG3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
SMKR1H3BMG3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
SMKR1H3BMG3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
SMKR1H3BMG3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
SMKR1H3BMG3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SMKR1H3BMG3 AL356292.1-201ENST00000283110 373 ntBASIC1.42□□□□□ -2.18
SMKR1H3BMG3 CBX3P1-201ENST00000325243 554 ntBASIC1.42□□□□□ -2.18
SMKR1H3BMG3 RNU6-23P-201ENST00000363283 107 ntBASIC1.42□□□□□ -2.18
SMKR1H3BMG3 RNU6-1303P-201ENST00000364841 107 ntBASIC1.42□□□□□ -2.18
SMKR1H3BMG3 AL030996.1-201ENST00000411430 235 ntBASIC1.42□□□□□ -2.18
SMKR1H3BMG3 SNORD56-201ENST00000413522 71 ntBASIC1.42□□□□□ -2.18
SMKR1H3BMG3 VN1R36P-201ENST00000414936 291 ntBASIC1.42□□□□□ -2.18
SMKR1H3BMG3 EIF1AXP1-201ENST00000419267 435 ntBASIC1.42□□□□□ -2.18
SMKR1H3BMG3 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.42□□□□□ -2.18
SMKR1H3BMG3 AL022238.1-201ENST00000442557 355 ntBASIC1.42□□□□□ -2.18
SMKR1H3BMG3 AL360221.1-201ENST00000445989 335 ntBASIC1.42□□□□□ -2.18
SMKR1H3BMG3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.42□□□□□ -2.18
SMKR1H3BMG3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.42□□□□□ -2.18
SMKR1H3BMG3 AL133217.1-201ENST00000450980 425 ntBASIC1.42□□□□□ -2.18
SMKR1H3BMG3 AC145146.1-201ENST00000496370 254 ntBASIC1.42□□□□□ -2.18
SMKR1H3BMG3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.42□□□□□ -2.18
SMKR1H3BMG3 AC008834.1-201ENST00000511612 175 ntBASIC1.42□□□□□ -2.18
SMKR1H3BMG3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.42□□□□□ -2.18
SMKR1H3BMG3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.42□□□□□ -2.18
SMKR1H3BMG3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.42□□□□□ -2.18
SMKR1H3BMG3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.42□□□□□ -2.18
SMKR1H3BMG3 HSBP1P1-201ENST00000555205 166 ntBASIC1.42□□□□□ -2.18
SMKR1H3BMG3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.42□□□□□ -2.18
SMKR1H3BMG3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.42□□□□□ -2.18
SMKR1H3BMG3 AL590229.1-201ENST00000603497 542 ntBASIC1.42□□□□□ -2.18
SMKR1H3BMG3 Z84480.1-201ENST00000605131 311 ntBASIC1.42□□□□□ -2.18
SMKR1H3BMG3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.42□□□□□ -2.18
SMKR1H3BMG3 BX323046.1-201ENST00000610145 535 ntBASIC1.42□□□□□ -2.18
SMKR1H3BMG3 MIR7106-201ENST00000612419 65 ntBASIC1.42□□□□□ -2.18
SMKR1H3BMG3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.42□□□□□ -2.18
SMKR1H3BMG3 AC130454.1-201ENST00000622948 401 ntBASIC1.42□□□□□ -2.18
SMKR1H3BMG3 CTSLP2-204ENST00000629029 392 ntBASIC1.42□□□□□ -2.18
SMKR1H3BMG3 SNORD98-201ENST00000636377 67 ntBASIC1.42□□□□□ -2.18
SMKR1H3BMG3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SMKR1H3BMG3 MTND5P6-201ENST00000422338 1798 ntBASIC1.42□□□□□ -2.18
SMKR1H3BMG3 AC233981.2-201ENST00000611524 1614 ntBASIC1.41□□□□□ -2.18
SMKR1H3BMG3 AP000560.1-201ENST00000624150 1937 ntBASIC1.41□□□□□ -2.18
SMKR1H3BMG3 RNA5SP493-201ENST00000364115 91 ntBASIC1.41□□□□□ -2.18
SMKR1H3BMG3 RNU4-48P-201ENST00000365559 182 ntBASIC1.41□□□□□ -2.18
SMKR1H3BMG3 RNU6-142P-201ENST00000384019 107 ntBASIC1.41□□□□□ -2.18
SMKR1H3BMG3 RNU6-297P-201ENST00000384636 107 ntBASIC1.41□□□□□ -2.18
SMKR1H3BMG3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms