Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 LRRC34P1-201ENST00000542742 915 ntBASIC-0.12□□□□□ -2.43
COL6A5A8TX70 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC-0.12□□□□□ -2.43
COL6A5A8TX70 AC010738.1-201ENST00000604970 987 ntBASIC-0.12□□□□□ -2.43
COL6A5A8TX70 AL031667.3-201ENST00000620124 655 ntBASIC-0.12□□□□□ -2.43
COL6A5A8TX70 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC-0.12□□□□□ -2.43
COL6A5A8TX70 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
COL6A5A8TX70 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.12□□□□□ -2.43
COL6A5A8TX70 RNU11-3P-201ENST00000391111 133 ntBASIC-0.12□□□□□ -2.43
COL6A5A8TX70 RPS15AP38-201ENST00000413110 372 ntBASIC-0.12□□□□□ -2.43
COL6A5A8TX70 AL714022.1-201ENST00000439897 151 ntBASIC-0.12□□□□□ -2.43
COL6A5A8TX70 AC116337.2-201ENST00000477662 156 ntBASIC-0.12□□□□□ -2.43
COL6A5A8TX70 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
COL6A5A8TX70 AC022493.2-201ENST00000506122 481 ntBASIC-0.12□□□□□ -2.43
COL6A5A8TX70 SNORA4.4-201ENST00000515921 135 ntBASIC-0.12□□□□□ -2.43
COL6A5A8TX70 AC012507.3-201ENST00000603556 477 ntBASIC-0.12□□□□□ -2.43
COL6A5A8TX70 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC-0.12□□□□□ -2.43
COL6A5A8TX70 MIR4315-1-201ENST00000636800 73 ntBASIC-0.12□□□□□ -2.43
COL6A5A8TX70 MIR4315-2-201ENST00000640925 73 ntBASIC-0.12□□□□□ -2.43
COL6A5A8TX70 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC-0.12□□□□□ -2.43
COL6A5A8TX70 ANKRD26P2-201ENST00000445530 1710 ntBASIC-0.13□□□□□ -2.43
COL6A5A8TX70 MIR103A1-201ENST00000362165 78 ntBASIC-0.13□□□□□ -2.43
COL6A5A8TX70 MT-TP-201ENST00000387461 68 ntBASIC-0.13□□□□□ -2.43
COL6A5A8TX70 MIR1283-2-201ENST00000408621 87 ntBASIC-0.13□□□□□ -2.43
COL6A5A8TX70 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC-0.13□□□□□ -2.43
COL6A5A8TX70 RPL17P35-201ENST00000432217 549 ntBASIC-0.13□□□□□ -2.43
COL6A5A8TX70 AC092685.1-201ENST00000447960 1243 ntBASIC-0.13□□□□□ -2.43
COL6A5A8TX70 AC074344.1-201ENST00000512823 224 ntBASIC-0.13□□□□□ -2.43
COL6A5A8TX70 RNA5SP255-201ENST00000516370 107 ntBASIC-0.13□□□□□ -2.43
COL6A5A8TX70 AC109810.1-201ENST00000534066 224 ntBASIC-0.13□□□□□ -2.43
COL6A5A8TX70 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC-0.13□□□□□ -2.43
COL6A5A8TX70 AC087481.2-201ENST00000565492 330 ntBASIC-0.13□□□□□ -2.43
COL6A5A8TX70 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC-0.13□□□□□ -2.43
COL6A5A8TX70 AC015726.3-201ENST00000624501 418 ntBASIC-0.13□□□□□ -2.43
COL6A5A8TX70 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
COL6A5A8TX70 MTCO3P2-201ENST00000457365 171 ntBASIC-0.13□□□□□ -2.43
COL6A5A8TX70 AC116347.2-201ENST00000514912 523 ntBASIC-0.13□□□□□ -2.43
COL6A5A8TX70 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC-0.13□□□□□ -2.43
COL6A5A8TX70 AC105129.3-201ENST00000605455 485 ntBASIC-0.13□□□□□ -2.43
COL6A5A8TX70 U1.36-201ENST00000620684 176 ntBASIC-0.13□□□□□ -2.43
COL6A5A8TX70 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
COL6A5A8TX70 RNU6-858P-201ENST00000362436 107 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 RNU6-25P-201ENST00000383873 107 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 RNU6-29P-201ENST00000384637 107 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 CALM2P3-201ENST00000400429 449 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 AL449283.1-202ENST00000418249 604 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC-0.14□□□□□ -2.43
COL6A5A8TX70 MTCO3P18-201ENST00000440206 761 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 AC132479.1-201ENST00000449160 144 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 OR2AQ1P-201ENST00000451972 200 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 AC092757.1-201ENST00000467293 467 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 RNU6-27P-201ENST00000516146 107 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 MTND2P26-201ENST00000528255 1029 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 MIR4431-201ENST00000579990 94 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC-0.14□□□□□ -2.43
COL6A5A8TX70 AC068790.6-201ENST00000602558 258 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 MTND5P33-201ENST00000571250 1450 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 RNA5SP264-201ENST00000363115 107 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 RNA5SP275-201ENST00000363936 118 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 MIR200A-201ENST00000384875 90 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 RAP1BP3-201ENST00000407180 549 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 RN7SKP266-201ENST00000410232 287 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 NDUFA5P10-201ENST00000432147 357 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 AC027119.1-201ENST00000440877 241 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 MTCO1P44-201ENST00000441935 243 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.14□□□□□ -2.43
COL6A5A8TX70 SNORA68.3-201ENST00000515906 83 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 AC067904.2-201ENST00000517322 1283 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.14□□□□□ -2.43
COL6A5A8TX70 AC103705.1-201ENST00000619013 241 ntBASIC-0.14□□□□□ -2.43
COL6A5A8TX70 ENSAP3-201ENST00000312710 333 ntBASIC-0.15□□□□□ -2.43
COL6A5A8TX70 RNU4-45P-201ENST00000365469 141 ntBASIC-0.15□□□□□ -2.43
COL6A5A8TX70 MIR29C-201ENST00000385231 88 ntBASIC-0.15□□□□□ -2.43
COL6A5A8TX70 UBE2V1P4-201ENST00000425374 344 ntBASIC-0.15□□□□□ -2.43
COL6A5A8TX70 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC-0.15□□□□□ -2.43
COL6A5A8TX70 AC093303.1-201ENST00000514549 295 ntBASIC-0.15□□□□□ -2.43
COL6A5A8TX70 SNORA70.16-201ENST00000516390 95 ntBASIC-0.15□□□□□ -2.43
COL6A5A8TX70 uc_338.36-201ENST00000622331 158 ntBASIC-0.15□□□□□ -2.43
COL6A5A8TX70 RNU6-414P-201ENST00000363705 104 ntBASIC-0.15□□□□□ -2.43
COL6A5A8TX70 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.15□□□□□ -2.43
COL6A5A8TX70 MIR320B1-201ENST00000390209 79 ntBASIC-0.15□□□□□ -2.43
COL6A5A8TX70 MTND4LP21-201ENST00000415303 295 ntBASIC-0.15□□□□□ -2.43
COL6A5A8TX70 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.15□□□□□ -2.43
COL6A5A8TX70 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.15□□□□□ -2.43
COL6A5A8TX70 KATNBL1P6-201ENST00000453433 915 ntBASIC-0.15□□□□□ -2.43
COL6A5A8TX70 PNPLA4P1-201ENST00000458328 305 ntBASIC-0.15□□□□□ -2.43
COL6A5A8TX70 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.15□□□□□ -2.43
COL6A5A8TX70 SNORA31.6-201ENST00000516241 130 ntBASIC-0.15□□□□□ -2.43
COL6A5A8TX70 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC-0.15□□□□□ -2.43
COL6A5A8TX70 AC125611.1-201ENST00000549563 229 ntBASIC-0.15□□□□□ -2.43
COL6A5A8TX70 MIR4436A-201ENST00000585278 85 ntBASIC-0.15□□□□□ -2.43
COL6A5A8TX70 AC090330.1-201ENST00000588646 764 ntBASIC-0.15□□□□□ -2.43
COL6A5A8TX70 AC091965.5-201ENST00000624785 342 ntBASIC-0.15□□□□□ -2.43
COL6A5A8TX70 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.15□□□□□ -2.43
COL6A5A8TX70 SNORD71-201ENST00000411292 86 ntBASIC-0.16□□□□□ -2.43
COL6A5A8TX70 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC-0.16□□□□□ -2.43
COL6A5A8TX70 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.16□□□□□ -2.43
COL6A5A8TX70 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.16□□□□□ -2.43
COL6A5A8TX70 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC-0.16□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms