Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 AC091895.1-201ENST00000624494 256 ntBASIC0.5□□□□□ -2.33
TRBV27A0A0K0K1C4 PCMTD1P7-201ENST00000634506 357 ntBASIC0.5□□□□□ -2.33
TRBV27A0A0K0K1C4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.5□□□□□ -2.33
TRBV27A0A0K0K1C4 Y_RNA.33-201ENST00000362591 102 ntBASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 RNU6-53P-201ENST00000365367 106 ntBASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 Y_RNA.534-201ENST00000384599 112 ntBASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 RNU6-331P-201ENST00000384724 107 ntBASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 MIR194-1-201ENST00000384892 85 ntBASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 MIR764-201ENST00000390811 85 ntBASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 CYCSP33-201ENST00000414485 327 ntBASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 AC004941.2-201ENST00000427009 228 ntBASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 AL591704.1-201ENST00000432574 275 ntBASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 MTCO2P25-201ENST00000447065 681 ntBASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 FTH1P25-201ENST00000447665 469 ntBASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 PDCD5P2-201ENST00000507570 312 ntBASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 RNU6-322P-201ENST00000516010 103 ntBASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 SNORA70.22-201ENST00000517160 124 ntBASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 AC004817.2-201ENST00000561794 651 ntBASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 VN1R80P-201ENST00000597126 338 ntBASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 VN1R107P-201ENST00000601784 209 ntBASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 AC107304.1-201ENST00000604229 296 ntBASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 AC130324.3-201ENST00000614165 542 ntBASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 AL353997.5-201ENST00000618886 171 ntBASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 AC097460.3-201ENST00000623099 442 ntBASIC0.49□□□□□ -2.33
TRBV27A0A0K0K1C4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 RNU6-354P-201ENST00000383862 107 ntBASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 RNU6-1080P-201ENST00000383982 107 ntBASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 RNU6-610P-201ENST00000384264 107 ntBASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 SNORD116-20-201ENST00000384529 92 ntBASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 MRPS36P1-201ENST00000421291 307 ntBASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 SNRPEP7-201ENST00000438350 220 ntBASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 MTCO3P43-201ENST00000440974 771 ntBASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 AL583843.1-201ENST00000456070 346 ntBASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 SNRPFP4-201ENST00000456366 242 ntBASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 RN7SL429P-201ENST00000479090 223 ntBASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 RN7SL489P-201ENST00000486185 223 ntBASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 RN7SL327P-201ENST00000488659 223 ntBASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 AC108210.2-201ENST00000503681 201 ntBASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 AC079140.3-201ENST00000511111 550 ntBASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 RNY4P37-201ENST00000516225 96 ntBASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 DEFB131D-201ENST00000526803 184 ntBASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 AC098848.2-201ENST00000588023 330 ntBASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 AC008751.2-201ENST00000597885 980 ntBASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 AC040896.1-201ENST00000613819 479 ntBASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 RN7SL853P-201ENST00000617250 223 ntBASIC0.48□□□□□ -2.33
TRBV27A0A0K0K1C4 SNORD3E-201ENST00000362899 217 ntBASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 SNORD114-24-201ENST00000365029 72 ntBASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 SNORA4.3-201ENST00000365564 137 ntBASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 AL356776.1-201ENST00000406574 447 ntBASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 RAP1BP3-201ENST00000407180 549 ntBASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 AC114482.1-201ENST00000418010 247 ntBASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 AC123900.1-201ENST00000420390 96 ntBASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 LARP1BP3-201ENST00000437229 869 ntBASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 snoU13.30-201ENST00000458951 104 ntBASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 RAP1BP2-201ENST00000478270 544 ntBASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 TRBVA-201ENST00000498804 316 ntBASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 AC005741.1-201ENST00000511094 432 ntBASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 AC104072.1-201ENST00000568817 668 ntBASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 MIR1273C-201ENST00000578669 77 ntBASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 MIR3973-201ENST00000579824 107 ntBASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 RPL21P136-201ENST00000605378 396 ntBASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 RNU6-87P-201ENST00000607561 108 ntBASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 AC023158.2-201ENST00000614876 543 ntBASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.47□□□□□ -2.33
TRBV27A0A0K0K1C4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 Y_RNA.327-201ENST00000365201 102 ntBASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 RNU6-395P-201ENST00000365662 106 ntBASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 RNU6-207P-201ENST00000384137 107 ntBASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 RNU6-72P-201ENST00000384285 79 ntBASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 FCF1P10-201ENST00000407590 479 ntBASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 RNU6-733P-201ENST00000410759 104 ntBASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 AL365338.1-201ENST00000422282 858 ntBASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 FO393414.1-201ENST00000428697 1184 ntBASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 snoU109.2-201ENST00000459316 135 ntBASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 SNORD124-201ENST00000459577 104 ntBASIC0.46□□□□□ -2.34
TRBV27A0A0K0K1C4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms