Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 Y_RNA.191-201ENST00000363972 113 ntBASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 SNORD114-6-201ENST00000364393 72 ntBASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 Y_RNA.332-201ENST00000365271 113 ntBASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 RNU6-53P-201ENST00000365367 106 ntBASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 FCF1P10-201ENST00000407590 479 ntBASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 MIR320C1-201ENST00000408566 88 ntBASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 MIR1267-201ENST00000408723 78 ntBASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 CST2P1-201ENST00000425770 87 ntBASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 LARP1BP3-201ENST00000437229 869 ntBASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 DUXAP8-207ENST00000456786 622 ntBASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 AF131216.2-201ENST00000512316 564 ntBASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 MTND3P13-201ENST00000574391 343 ntBASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 MIR3146-201ENST00000580367 79 ntBASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 AP000860.1-201ENST00000605250 559 ntBASIC0.77□□□□□ -2.29
TRAV3A0A0B4J244 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 MIR412-201ENST00000362142 91 ntBASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 RNU6-414P-201ENST00000363705 104 ntBASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 Y_RNA.255-201ENST00000364581 97 ntBASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 Y_RNA.623-201ENST00000411128 95 ntBASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 USP9YP33-201ENST00000412220 421 ntBASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 AC009518.2-201ENST00000418056 731 ntBASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 MTND4P20-201ENST00000424125 869 ntBASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 AL627311.1-201ENST00000431514 115 ntBASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 AL365400.1-201ENST00000431854 640 ntBASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 AL591212.2-201ENST00000433923 257 ntBASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 TIMM9P1-201ENST00000436122 256 ntBASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 AL135790.2-201ENST00000437701 267 ntBASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 MTND1P30-201ENST00000441241 901 ntBASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 AC244505.5-201ENST00000443639 207 ntBASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 OR2AQ1P-201ENST00000451972 200 ntBASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 AL583843.1-201ENST00000456070 346 ntBASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 AL138889.2-201ENST00000603883 242 ntBASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 BCRP9-201ENST00000605312 388 ntBASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 AL078604.3-201ENST00000615580 211 ntBASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 AL512427.1-201ENST00000618593 349 ntBASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
TRAV3A0A0B4J244 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 RNU6-511P-201ENST00000363496 107 ntBASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 Y_RNA.224-201ENST00000364308 111 ntBASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 RNU6-298P-201ENST00000390888 96 ntBASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 Y_RNA.597-201ENST00000410463 100 ntBASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 EIF1P1-201ENST00000421436 341 ntBASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 MTCYBP5-201ENST00000423752 1135 ntBASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 AL589872.1-201ENST00000426602 288 ntBASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 TXNL1P1-201ENST00000429528 554 ntBASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 DYNLT3P2-201ENST00000442517 295 ntBASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 AC130509.1-201ENST00000464158 433 ntBASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 COX6CP14-201ENST00000469580 174 ntBASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 SUMO2P5-201ENST00000506790 245 ntBASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 RNA5SP102-201ENST00000516865 106 ntBASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 RNU6-677P-201ENST00000516914 101 ntBASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 AC091163.3-201ENST00000518269 1144 ntBASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 VN1R82P-201ENST00000601481 356 ntBASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 AC078795.2-201ENST00000602835 1252 ntBASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 AC112220.2-201ENST00000605513 533 ntBASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 AL590240.4-201ENST00000616908 390 ntBASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 AC007792.1-201ENST00000623023 402 ntBASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 AL359740.1-201ENST00000624340 592 ntBASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 AC091948.2-201ENST00000636510 279 ntBASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
TRAV3A0A0B4J244 RNU1-124P-201ENST00000363861 145 ntBASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 Y_RNA.192-201ENST00000363977 102 ntBASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 MIR1276-201ENST00000408707 83 ntBASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 PIGPP2-201ENST00000411569 458 ntBASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 RPL37P10-201ENST00000412884 288 ntBASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 FTH1P12-201ENST00000432137 551 ntBASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 CALM1P1-201ENST00000442082 433 ntBASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 USP9YP17-201ENST00000444617 696 ntBASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 AL139824.2-201ENST00000458731 1095 ntBASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 MTND1P16-201ENST00000465177 898 ntBASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 AC119751.4-201ENST00000507498 357 ntBASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 AC009646.1-201ENST00000510455 318 ntBASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms