Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 RNA5SP374-201ENST00000362939 125 ntBASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 RNU6-702P-201ENST00000364982 107 ntBASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 MIR634-201ENST00000385208 97 ntBASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 MIR1290-201ENST00000408735 78 ntBASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 RNU6-101P-201ENST00000410323 104 ntBASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 RNU2-23P-201ENST00000410545 195 ntBASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 MRPS18CP6-201ENST00000423587 223 ntBASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 AL158071.1-201ENST00000430315 461 ntBASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 DAP3P1-201ENST00000441522 278 ntBASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 RPS24P13-201ENST00000442520 397 ntBASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 Z75741.1-201ENST00000446793 314 ntBASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 AC091179.1-201ENST00000461606 579 ntBASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 AL359273.1-201ENST00000510918 627 ntBASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 ACA59.1-201ENST00000515966 143 ntBASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 SCARNA15.2-201ENST00000516409 127 ntBASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 AP006245.1-201ENST00000522549 120 ntBASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 SUB1P3-201ENST00000564581 315 ntBASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 MIR3921-201ENST00000577308 85 ntBASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 PRR13P7-201ENST00000605538 430 ntBASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 AC090425.1-201ENST00000610007 140 ntBASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 RMST_4.1-201ENST00000616886 107 ntBASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CTDP1Q9Y5B0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 SRP72P2-201ENST00000344851 1979 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 AC091812.1-201ENST00000432235 1948 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 RNU6-238P-201ENST00000363313 106 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 RNU6-799P-201ENST00000363567 107 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 Y_RNA.153-201ENST00000363615 91 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 Y_RNA.485-201ENST00000384395 102 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 RNU6-933P-201ENST00000384424 107 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 Y_RNA.574-201ENST00000384766 95 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 RNU6-1025P-201ENST00000410629 104 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 Y_RNA.618-201ENST00000410949 107 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 AL356968.1-201ENST00000416622 474 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 BX276092.3-201ENST00000424182 230 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 AC109925.1-201ENST00000478069 331 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 AC011005.2-201ENST00000487324 359 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 RNU6-475P-201ENST00000516073 104 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 RNU6-1256P-201ENST00000516539 103 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 RNU4-77P-201ENST00000516692 156 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 HSBP1P1-201ENST00000555205 166 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 MIR5004-201ENST00000579078 107 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 MIR4273-201ENST00000582824 84 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 AC011471.1-201ENST00000585766 187 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 AL355598.1-201ENST00000604169 202 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 AC124312.5-201ENST00000604451 268 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 AC123912.5-201ENST00000605470 343 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 RMST_8.1-201ENST00000610287 165 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 AC007792.1-201ENST00000623023 402 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 AL606534.2-204ENST00000635008 178 ntBASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CTDP1Q9Y5B0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CTDP1Q9Y5B0 GABRG2-229ENST00000641017 3628 ntBASIC3.79□□□□□ -1.8
CTDP1Q9Y5B0 RNU6-450P-201ENST00000364654 107 ntBASIC3.79□□□□□ -1.8
CTDP1Q9Y5B0 Y_RNA.314-201ENST00000365114 102 ntBASIC3.79□□□□□ -1.8
CTDP1Q9Y5B0 RNU6-596P-201ENST00000365395 98 ntBASIC3.79□□□□□ -1.8
CTDP1Q9Y5B0 RNU6-26P-201ENST00000383985 107 ntBASIC3.79□□□□□ -1.8
CTDP1Q9Y5B0 Y_RNA.424-201ENST00000384063 103 ntBASIC3.79□□□□□ -1.8
CTDP1Q9Y5B0 RNU6-325P-201ENST00000411132 105 ntBASIC3.79□□□□□ -1.8
CTDP1Q9Y5B0 AC114482.1-201ENST00000418010 247 ntBASIC3.79□□□□□ -1.8
CTDP1Q9Y5B0 AL353997.1-201ENST00000432936 108 ntBASIC3.79□□□□□ -1.8
CTDP1Q9Y5B0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.79□□□□□ -1.8
CTDP1Q9Y5B0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.79□□□□□ -1.8
CTDP1Q9Y5B0 AL031274.1-201ENST00000450334 232 ntBASIC3.79□□□□□ -1.8
CTDP1Q9Y5B0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.79□□□□□ -1.8
CTDP1Q9Y5B0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms