Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AL355816.2-201ENST00000610049 647 ntBASIC1.11□□□□□ -2.23
HDGFL3Q9Y3E1 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.11□□□□□ -2.23
HDGFL3Q9Y3E1 AL157834.3-201ENST00000615543 103 ntBASIC1.11□□□□□ -2.23
HDGFL3Q9Y3E1 AL356596.1-201ENST00000624230 379 ntBASIC1.11□□□□□ -2.23
HDGFL3Q9Y3E1 AC092104.1-201ENST00000497346 1441 ntBASIC1.11□□□□□ -2.23
HDGFL3Q9Y3E1 AC091812.1-201ENST00000432235 1948 ntBASIC1.11□□□□□ -2.23
HDGFL3Q9Y3E1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
HDGFL3Q9Y3E1 SNORD3E-201ENST00000362899 217 ntBASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 RNU6-23P-201ENST00000363283 107 ntBASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 RNA5SP493-201ENST00000364115 91 ntBASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 RNU6-743P-201ENST00000364151 106 ntBASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 SNORD116-20-201ENST00000384529 92 ntBASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 NCOR1P3-201ENST00000420479 303 ntBASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 EEF1A1P39-201ENST00000440791 250 ntBASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 AC245517.4-201ENST00000448601 281 ntBASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 RPL36AP21-201ENST00000490372 323 ntBASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 AC013828.2-201ENST00000532487 235 ntBASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 AL356057.1-201ENST00000533798 831 ntBASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 AC023050.2-201ENST00000544968 387 ntBASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 TRAV32-201ENST00000553993 340 ntBASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 MTND3P19-201ENST00000603825 345 ntBASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 AL592221.1-201ENST00000605266 382 ntBASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 AC144521.1-201ENST00000607148 956 ntBASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 AL050343.2-201ENST00000607338 280 ntBASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 AC024940.5-201ENST00000622889 474 ntBASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.1□□□□□ -2.23
HDGFL3Q9Y3E1 AL391987.6-201ENST00000305671 199 ntBASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 RNU6-212P-201ENST00000362642 104 ntBASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 RNY4P24-201ENST00000362735 96 ntBASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 SNORA4.1-201ENST00000364263 144 ntBASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 SNORD14B-201ENST00000364533 90 ntBASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 RPS3AP37-201ENST00000419176 745 ntBASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 RPS15AP10-201ENST00000432472 382 ntBASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 AL008629.1-201ENST00000438615 184 ntBASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 snoU13.9-201ENST00000458927 103 ntBASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 AL163540.1-201ENST00000485382 386 ntBASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 RPL30P1-201ENST00000488676 339 ntBASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 Y_RNA.689-201ENST00000516589 107 ntBASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 AC137800.2-201ENST00000574375 120 ntBASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 snoU13.31-201ENST00000607291 104 ntBASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 AC108747.1-201ENST00000609508 535 ntBASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 SCARNA4-202ENST00000625402 129 ntBASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 AC008993.2-201ENST00000631744 806 ntBASIC1.09□□□□□ -2.23
HDGFL3Q9Y3E1 MIR26B-201ENST00000362251 77 ntBASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 snoU2_19.1-201ENST00000362361 80 ntBASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 Y_RNA.46-201ENST00000362695 102 ntBASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 RNU4-91P-201ENST00000364778 135 ntBASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 RNU6-160P-201ENST00000384591 107 ntBASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 Y_RNA.597-201ENST00000410463 100 ntBASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 RNU2-41P-201ENST00000410991 178 ntBASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 MTCYBP5-201ENST00000423752 1135 ntBASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 RPS6P15-201ENST00000431996 751 ntBASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 RPS29P29-201ENST00000456396 171 ntBASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 AC087477.1-201ENST00000465747 340 ntBASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 AC112206.3-201ENST00000514578 389 ntBASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 RNA5SP445-201ENST00000515889 115 ntBASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 RNU6-902P-201ENST00000517212 91 ntBASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 AP003122.4-201ENST00000530980 758 ntBASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 SNORA77B-201ENST00000578179 125 ntBASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 AL391001.1-201ENST00000602747 715 ntBASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 AC022022.2-201ENST00000602989 360 ntBASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 AP001485.1-201ENST00000604799 199 ntBASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 AC123912.5-201ENST00000605470 343 ntBASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 AC007792.1-201ENST00000623023 402 ntBASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 AC106858.1-201ENST00000637497 429 ntBASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
HDGFL3Q9Y3E1 OR4G2P-201ENST00000328113 903 ntBASIC1.07□□□□□ -2.24
HDGFL3Q9Y3E1 RNU6-271P-201ENST00000363858 105 ntBASIC1.07□□□□□ -2.24
HDGFL3Q9Y3E1 MIR10A-201ENST00000385043 110 ntBASIC1.07□□□□□ -2.24
HDGFL3Q9Y3E1 FGF7P8-201ENST00000402994 292 ntBASIC1.07□□□□□ -2.24
HDGFL3Q9Y3E1 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.07□□□□□ -2.24
HDGFL3Q9Y3E1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.07□□□□□ -2.24
HDGFL3Q9Y3E1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.07□□□□□ -2.24
HDGFL3Q9Y3E1 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.07□□□□□ -2.24
HDGFL3Q9Y3E1 AC092473.1-201ENST00000441098 221 ntBASIC1.07□□□□□ -2.24
HDGFL3Q9Y3E1 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms