Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 AP001781.1-201ENST00000530977 207 ntBASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 MIR5692C2-201ENST00000577959 77 ntBASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 RPS15AP11-201ENST00000594193 385 ntBASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 AC091932.3-201ENST00000624223 323 ntBASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 AC021753.1-201ENST00000635724 168 ntBASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
FOXD3Q9UJU5 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
FOXD3Q9UJU5 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
FOXD3Q9UJU5 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
FOXD3Q9UJU5 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 Y_RNA.101-201ENST00000363154 102 ntBASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 SNORD113-1-201ENST00000365321 69 ntBASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 CBX3P9-201ENST00000402326 552 ntBASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 MIR548I2-201ENST00000408348 149 ntBASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 RNU2-54P-201ENST00000410299 190 ntBASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 RNA5SP146-201ENST00000410743 123 ntBASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 AC096649.2-201ENST00000416186 393 ntBASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 RNU6-191P-201ENST00000516295 94 ntBASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 AC012493.2-201ENST00000595083 291 ntBASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 AL020997.2-201ENST00000602607 184 ntBASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 AC005828.6-201ENST00000606610 232 ntBASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 AC091979.2-201ENST00000607514 214 ntBASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 MIR3674-201ENST00000636576 68 ntBASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.08□□□□□ -1.76
FOXD3Q9UJU5 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
FOXD3Q9UJU5 RAD17P1-201ENST00000418130 2042 ntBASIC4.07□□□□□ -1.76
FOXD3Q9UJU5 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXD3Q9UJU5 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
FOXD3Q9UJU5 RNU4-80P-201ENST00000363200 141 ntBASIC4.07□□□□□ -1.76
FOXD3Q9UJU5 Y_RNA.308-201ENST00000365043 101 ntBASIC4.07□□□□□ -1.76
FOXD3Q9UJU5 MTCO2P33-201ENST00000402100 465 ntBASIC4.07□□□□□ -1.76
FOXD3Q9UJU5 OOSP1P1-201ENST00000423265 274 ntBASIC4.07□□□□□ -1.76
FOXD3Q9UJU5 RPEP3-201ENST00000425462 676 ntBASIC4.07□□□□□ -1.76
FOXD3Q9UJU5 AC109327.1-201ENST00000471666 403 ntBASIC4.07□□□□□ -1.76
FOXD3Q9UJU5 RN7SL810P-201ENST00000493031 276 ntBASIC4.07□□□□□ -1.76
FOXD3Q9UJU5 RNU6-155P-201ENST00000516347 100 ntBASIC4.07□□□□□ -1.76
FOXD3Q9UJU5 MRPS18CP4-201ENST00000535821 231 ntBASIC4.07□□□□□ -1.76
FOXD3Q9UJU5 AC027176.1-201ENST00000560204 514 ntBASIC4.07□□□□□ -1.76
FOXD3Q9UJU5 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXD3Q9UJU5 AC023043.4-201ENST00000612081 449 ntBASIC4.07□□□□□ -1.76
FOXD3Q9UJU5 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.07□□□□□ -1.76
FOXD3Q9UJU5 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.07□□□□□ -1.76
FOXD3Q9UJU5 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.07□□□□□ -1.76
FOXD3Q9UJU5 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
FOXD3Q9UJU5 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.07□□□□□ -1.76
FOXD3Q9UJU5 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 AC021146.4-201ENST00000309229 279 ntBASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 RNU6-923P-201ENST00000364753 107 ntBASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 SNORD50.2-201ENST00000365465 70 ntBASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 MIR613-201ENST00000385248 95 ntBASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 RNA5SP201-201ENST00000410316 124 ntBASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 RNA5SP475-201ENST00000410568 110 ntBASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 AC009237.7-201ENST00000447357 229 ntBASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 RN7SL303P-201ENST00000469773 251 ntBASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 UQCRHP4-201ENST00000471686 272 ntBASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 AC108022.1-201ENST00000493466 478 ntBASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 AC092628.2-201ENST00000622492 339 ntBASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 UBE3AP2-201ENST00000429033 2259 ntBASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 AC087190.4-201ENST00000574616 8334 ntBASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 AC010680.1-201ENST00000590024 3590 ntBASIC4.06□□□□□ -1.76
FOXD3Q9UJU5 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.05□□□□□ -1.76
FOXD3Q9UJU5 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms