Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 AC073415.1-201ENST00000449240 153 ntBASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 AC092001.1-201ENST00000453012 261 ntBASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 snoU109.2-201ENST00000459316 135 ntBASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 SRRM1P2-201ENST00000464531 1192 ntBASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 MTND3P25-201ENST00000509243 135 ntBASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 AC009646.1-201ENST00000510455 318 ntBASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 RNU1-86P-201ENST00000516108 154 ntBASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 RNU6-506P-201ENST00000516553 94 ntBASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 RNU6-314P-201ENST00000516574 104 ntBASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 RNU1-107P-201ENST00000516617 154 ntBASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 MIR514B-201ENST00000516774 80 ntBASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 Y_RNA.704-201ENST00000516851 102 ntBASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 NACAP3-201ENST00000552100 481 ntBASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 PRELID2P1-201ENST00000552837 301 ntBASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 EIF1P4-201ENST00000572664 335 ntBASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 AC010378.1-201ENST00000619270 362 ntBASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 AC010889.1-201ENST00000566193 2666 ntBASIC2.12□□□□□ -2.07
APOBEC3BQ9UH17 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 MIR412-201ENST00000362142 91 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 SNORD14B-201ENST00000364533 90 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 RNU6-1303P-201ENST00000364841 107 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 RNU6-384P-201ENST00000364900 104 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 MIR518D-201ENST00000385014 87 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 MIR10A-201ENST00000385043 110 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 RNU6-750P-201ENST00000390946 107 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 AL023284.1-201ENST00000403956 276 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 SNORD23.1-201ENST00000408212 104 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 U3.40-201ENST00000408706 208 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 RNU4-46P-201ENST00000410818 138 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 PGBD4P6-201ENST00000421501 610 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 AL669831.1-202ENST00000428504 417 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 GTF2IP13-201ENST00000438487 386 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 AC016691.1-201ENST00000441321 413 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 GMFBP1-201ENST00000467831 427 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 TRBV1-201ENST00000476502 284 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 RPL21P99-201ENST00000480369 423 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 AC105417.1-201ENST00000514691 285 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 SCARNA17.1-201ENST00000516211 143 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 SNORA40.12-201ENST00000516329 111 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 SCARNA17.2-201ENST00000516334 143 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 AC104383.1-201ENST00000530297 370 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 CYCSP26-201ENST00000534107 320 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 AK6P1-201ENST00000540219 478 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 BNIP3P6-201ENST00000549284 499 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 HIF1AP1-201ENST00000553642 175 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 LRRC37A5P-203ENST00000580181 585 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 BNIP3P30-201ENST00000601184 574 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 AP001330.5-201ENST00000607176 411 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 SCARNA17.4-201ENST00000614296 143 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 AC073534.2-201ENST00000620377 381 ntBASIC2.11□□□□□ -2.07
APOBEC3BQ9UH17 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 RNU6-1085P-201ENST00000363576 107 ntBASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 RNU6-517P-201ENST00000384362 110 ntBASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 RNU6-1215P-201ENST00000384441 102 ntBASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 RNU6-45P-201ENST00000384471 107 ntBASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 RNU6-1127P-201ENST00000384580 107 ntBASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 SNORA48.3-201ENST00000391081 134 ntBASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 RNU2-29P-201ENST00000410423 189 ntBASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 AL161651.1-201ENST00000440882 223 ntBASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 GPM6BP3-201ENST00000442797 145 ntBASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 AC003071.1-201ENST00000451219 789 ntBASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 BTF3P15-201ENST00000455606 336 ntBASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 AC107626.1-201ENST00000471084 183 ntBASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 AL163973.1-201ENST00000484753 577 ntBASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 RPS27P21-201ENST00000486977 252 ntBASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 AC019235.1-201ENST00000503847 207 ntBASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 AP003034.1-201ENST00000534621 422 ntBASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 AC087241.2-201ENST00000535801 324 ntBASIC2.1□□□□□ -2.07
APOBEC3BQ9UH17 AL512360.1-201ENST00000555346 234 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms