Protein–RNA interactions for Protein: Q9P031

CCDC59, Thyroid transcription factor 1-associated protein 26, humanhuman

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59Q9P031 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC59Q9P031 Z99497.1-201ENST00000421282 135 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 EIF4EP2-201ENST00000422816 654 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.53□□□□□ -2.16
CCDC59Q9P031 AC010099.3-201ENST00000423896 409 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 UBE2V1P4-201ENST00000425374 344 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC59Q9P031 AL445646.1-201ENST00000431784 216 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 AL591043.1-201ENST00000432461 424 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.53□□□□□ -2.16
CCDC59Q9P031 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.53□□□□□ -2.16
CCDC59Q9P031 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC59Q9P031 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.53□□□□□ -2.16
CCDC59Q9P031 MTND2P33-201ENST00000506452 1031 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.53□□□□□ -2.16
CCDC59Q9P031 AC104806.1-201ENST00000508720 308 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 AC093259.1-201ENST00000509755 300 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 Vault.3-201ENST00000516676 95 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 AP001372.4-201ENST00000524889 472 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 GNAI2P1-201ENST00000541815 315 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC59Q9P031 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC59Q9P031 AC090616.2-202ENST00000584248 222 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.53□□□□□ -2.16
CCDC59Q9P031 WISP1-OT1-201ENST00000602893 642 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 AL022345.1-201ENST00000607292 135 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 U2.15-201ENST00000611544 191 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 U2.16-201ENST00000613119 191 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 U2.12-201ENST00000613778 191 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 U2.20-201ENST00000613956 192 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.53□□□□□ -2.16
CCDC59Q9P031 U2.9-201ENST00000615427 191 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 U2.11-201ENST00000616345 191 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 U2.2-201ENST00000616535 191 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 U2.3-201ENST00000617785 191 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 U2.19-201ENST00000618602 191 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 RNU2-1-201ENST00000618664 191 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 U2.6-201ENST00000619225 191 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 U2.5-201ENST00000619465 191 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 U2.10-201ENST00000620268 191 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 AC097372.5-201ENST00000623665 376 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 MIR1248-201ENST00000629190 106 ntBASIC1.53□□□□□ -2.16
CCDC59Q9P031 MTND4P4-201ENST00000439033 1366 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CCDC59Q9P031 MIR126-201ENST00000362291 85 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 SNORA72.3-201ENST00000365074 132 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 SNORA70.4-201ENST00000365509 134 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 Y_RNA.560-201ENST00000384689 102 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 MIR544A-201ENST00000384855 91 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 AC068050.1-201ENST00000394891 380 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 CYCSP33-201ENST00000414485 327 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 OR6C66P-201ENST00000414917 930 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 CBX3P6-201ENST00000430257 527 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 MTND5P25-201ENST00000430499 799 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.52□□□□□ -2.17
CCDC59Q9P031 AC073614.1-201ENST00000438690 650 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC59Q9P031 AP001486.1-201ENST00000463339 476 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC59Q9P031 AC009646.1-201ENST00000510455 318 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC59Q9P031 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.52□□□□□ -2.17
CCDC59Q9P031 RNU6-991P-201ENST00000516168 107 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 RNU6-415P-201ENST00000516252 97 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 RNU6-970P-201ENST00000516312 107 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 AC090572.1-201ENST00000519251 160 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 AC009094.1-201ENST00000564443 426 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 BNIP3P8-201ENST00000597863 560 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 AC022022.2-201ENST00000602989 360 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 AC090578.1-201ENST00000604955 591 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 U1.36-201ENST00000620684 176 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 AC243829.7-201ENST00000633081 225 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 AL136360.1-201ENST00000503377 1900 ntBASIC1.52□□□□□ -2.17
CCDC59Q9P031 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
CCDC59Q9P031 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CCDC59Q9P031 Y_RNA.99-201ENST00000363138 105 ntBASIC1.51□□□□□ -2.17
CCDC59Q9P031 RNY4P34-201ENST00000364779 95 ntBASIC1.51□□□□□ -2.17
CCDC59Q9P031 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
CCDC59Q9P031 AL590556.1-201ENST00000423231 483 ntBASIC1.51□□□□□ -2.17
CCDC59Q9P031 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.51□□□□□ -2.17
CCDC59Q9P031 KATNBL1P3-201ENST00000443475 909 ntBASIC1.51□□□□□ -2.17
CCDC59Q9P031 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC59Q9P031 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC59Q9P031 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC59Q9P031 ANXA2P1-201ENST00000505539 926 ntBASIC1.51□□□□□ -2.17
CCDC59Q9P031 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC59Q9P031 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC59Q9P031 AC137800.2-201ENST00000574375 120 ntBASIC1.51□□□□□ -2.17
CCDC59Q9P031 CYP2C61P-201ENST00000604072 290 ntBASIC1.51□□□□□ -2.17
CCDC59Q9P031 AC092354.1-201ENST00000606057 376 ntBASIC1.51□□□□□ -2.17
CCDC59Q9P031 AC103810.8-201ENST00000607347 118 ntBASIC1.51□□□□□ -2.17
CCDC59Q9P031 AL392048.1-201ENST00000613946 534 ntBASIC1.51□□□□□ -2.17
CCDC59Q9P031 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CCDC59Q9P031 Y_RNA.367-201ENST00000365544 101 ntBASIC1.5□□□□□ -2.17
CCDC59Q9P031 RNU6-45P-201ENST00000384471 107 ntBASIC1.5□□□□□ -2.17
CCDC59Q9P031 RNU6-955P-201ENST00000410497 104 ntBASIC1.5□□□□□ -2.17
CCDC59Q9P031 RPS3AP3-201ENST00000411933 242 ntBASIC1.5□□□□□ -2.17
CCDC59Q9P031 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.5□□□□□ -2.17
CCDC59Q9P031 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms