Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RNU2-49P-201ENST00000410666 184 ntBASIC2.39□□□□□ -2.03
NDE1Q9NXR1 RPL26P27-201ENST00000414397 437 ntBASIC2.39□□□□□ -2.03
NDE1Q9NXR1 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.39□□□□□ -2.03
NDE1Q9NXR1 BPY2DP-201ENST00000422208 265 ntBASIC2.39□□□□□ -2.03
NDE1Q9NXR1 COTL1P1-201ENST00000422309 375 ntBASIC2.39□□□□□ -2.03
NDE1Q9NXR1 AL513185.2-201ENST00000425543 193 ntBASIC2.39□□□□□ -2.03
NDE1Q9NXR1 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.39□□□□□ -2.03
NDE1Q9NXR1 RNU7-66P-201ENST00000459469 62 ntBASIC2.39□□□□□ -2.03
NDE1Q9NXR1 HMGB1P30-201ENST00000492455 606 ntBASIC2.39□□□□□ -2.03
NDE1Q9NXR1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.39□□□□□ -2.03
NDE1Q9NXR1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.39□□□□□ -2.03
NDE1Q9NXR1 SNORA19.2-201ENST00000516013 114 ntBASIC2.39□□□□□ -2.03
NDE1Q9NXR1 SNORA14.1-201ENST00000516113 141 ntBASIC2.39□□□□□ -2.03
NDE1Q9NXR1 SNORA25.17-201ENST00000517184 124 ntBASIC2.39□□□□□ -2.03
NDE1Q9NXR1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.39□□□□□ -2.03
NDE1Q9NXR1 AC243972.3-201ENST00000539655 198 ntBASIC2.39□□□□□ -2.03
NDE1Q9NXR1 AL121579.1-201ENST00000555129 305 ntBASIC2.39□□□□□ -2.03
NDE1Q9NXR1 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.39□□□□□ -2.03
NDE1Q9NXR1 AL355598.1-201ENST00000604169 202 ntBASIC2.39□□□□□ -2.03
NDE1Q9NXR1 AL357078.3-201ENST00000607528 618 ntBASIC2.39□□□□□ -2.03
NDE1Q9NXR1 RMST_4.1-201ENST00000616886 107 ntBASIC2.39□□□□□ -2.03
NDE1Q9NXR1 AC009248.2-201ENST00000619826 254 ntBASIC2.39□□□□□ -2.03
NDE1Q9NXR1 AC007336.1-201ENST00000576365 3828 ntBASIC2.39□□□□□ -2.03
NDE1Q9NXR1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
NDE1Q9NXR1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.38□□□□□ -2.03
NDE1Q9NXR1 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NDE1Q9NXR1 Z82209.1-201ENST00000422141 2135 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.38□□□□□ -2.03
NDE1Q9NXR1 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.38□□□□□ -2.03
NDE1Q9NXR1 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
NDE1Q9NXR1 RNU6-82P-201ENST00000363970 107 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 RNU1-112P-201ENST00000364401 164 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 Y_RNA.324-201ENST00000365165 102 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 RNU6-831P-201ENST00000384548 107 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 RNU6-443P-201ENST00000384780 107 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 UBA52P6-201ENST00000399822 382 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 AC023141.4-201ENST00000412031 328 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 RPL21P111-201ENST00000418453 477 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 HMGB1P9-201ENST00000429856 646 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 AL627311.1-201ENST00000431514 115 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 AL139132.1-201ENST00000431587 344 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.38□□□□□ -2.03
NDE1Q9NXR1 AC098831.1-201ENST00000440661 216 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.38□□□□□ -2.03
NDE1Q9NXR1 MTATP6P7-201ENST00000453315 681 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 AC233279.1-201ENST00000455300 423 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.38□□□□□ -2.03
NDE1Q9NXR1 FAM206BP-201ENST00000510179 541 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.38□□□□□ -2.03
NDE1Q9NXR1 AC010486.1-201ENST00000511793 424 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 RNU6-507P-201ENST00000516045 100 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 RNU4-49P-201ENST00000516080 140 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 AC118273.2-201ENST00000532092 465 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.38□□□□□ -2.03
NDE1Q9NXR1 SCOCP1-201ENST00000554676 349 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.38□□□□□ -2.03
NDE1Q9NXR1 LARP7P3-201ENST00000579888 337 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 MIR5692C1-201ENST00000585309 91 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 AL451007.1-201ENST00000595491 289 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 AC093913.1-201ENST00000614178 329 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 AL161629.2-201ENST00000615347 275 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.38□□□□□ -2.03
NDE1Q9NXR1 AC006386.2-201ENST00000624491 75 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 AC012005.1-201ENST00000624575 75 ntBASIC2.38□□□□□ -2.03
NDE1Q9NXR1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
NDE1Q9NXR1 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
NDE1Q9NXR1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
NDE1Q9NXR1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NDE1Q9NXR1 ZNF720P1-201ENST00000562403 1939 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 CBX3P1-201ENST00000325243 554 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 SNORD62.1-201ENST00000362541 86 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 RNU6-37P-201ENST00000362692 107 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 RNU6-11P-201ENST00000364234 107 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 U3.12-201ENST00000364498 214 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 RNU6-7-201ENST00000364784 107 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 RNU6-8-201ENST00000365467 107 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 RNU6-25P-201ENST00000383873 107 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 RNU6-1-201ENST00000383898 107 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 RNU6-48P-201ENST00000384161 107 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 RNU6-36P-201ENST00000384172 107 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 RNU6-4P-201ENST00000384205 107 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 RNU6-5P-201ENST00000384238 107 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 RNU6-3P-201ENST00000384314 107 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 RNU6-16P-201ENST00000384385 107 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 RNU6-15P-201ENST00000384534 107 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 RNU6-2-201ENST00000384627 107 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 RNU6-29P-201ENST00000384637 107 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 RNU6-9-201ENST00000384776 107 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 RNU6-33P-201ENST00000384793 107 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 MIR518D-201ENST00000385014 87 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 NDUFS5P4-201ENST00000412983 318 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 AC009161.1-201ENST00000417306 376 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 ARL5AP1-201ENST00000418991 388 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 RPS15AP5-201ENST00000436276 388 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 MTCO3P18-201ENST00000440206 761 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 FTH1P25-201ENST00000447665 469 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 AC092001.1-201ENST00000453012 261 ntBASIC2.37□□□□□ -2.03
NDE1Q9NXR1 PMCHL2-203ENST00000457791 237 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms