Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 SNORA16.2-201ENST00000390991 127 ntBASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 RPS4XP7-201ENST00000406274 780 ntBASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 RN7SKP158-201ENST00000410453 326 ntBASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 AC002486.1-201ENST00000435098 391 ntBASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 PRPS1P1-201ENST00000445305 876 ntBASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 SNRPFP3-201ENST00000457792 225 ntBASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 snoU13.14-201ENST00000459372 104 ntBASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 AC108078.1-201ENST00000508073 725 ntBASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 MTCO3P7-201ENST00000510008 774 ntBASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 HMGB3P3-201ENST00000510526 400 ntBASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 RNA5SP82-201ENST00000516707 92 ntBASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 AC093249.1-201ENST00000567049 203 ntBASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 AGGF1P4-201ENST00000568249 801 ntBASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 MTATP6P3-201ENST00000581686 676 ntBASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 AC009314.1-201ENST00000603871 304 ntBASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 NDUFA8P1-201ENST00000605525 367 ntBASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 AC245008.1-201ENST00000608123 476 ntBASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 U4.7-201ENST00000638126 106 ntBASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
CCL28Q9NRJ3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 Y_RNA.40-201ENST00000362645 93 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 RNU6-655P-201ENST00000362858 107 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 RNU6-529P-201ENST00000363383 104 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 RNU6-1210P-201ENST00000363775 107 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 RNU1-91P-201ENST00000364746 163 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 RNU6-903P-201ENST00000391270 109 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 AC068050.1-201ENST00000394891 380 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 BTF3L4P1-201ENST00000413813 468 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 MTND1P23-201ENST00000416931 372 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 AL451074.3-201ENST00000437709 472 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 AC007969.2-201ENST00000441891 191 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 USP9YP8-201ENST00000441913 500 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 Z83846.1-201ENST00000446798 265 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 SCARNA18-201ENST00000459004 134 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 AL121594.1-201ENST00000475906 575 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 AC079140.5-201ENST00000507882 310 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 AL137161.1-201ENST00000532231 390 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 AC023050.3-201ENST00000541142 333 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 IMMP1LP2-201ENST00000552954 492 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 HIF1AP1-201ENST00000553642 175 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 MTCO3P23-201ENST00000561363 289 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 AL138976.2-201ENST00000563989 694 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 MYL12BP1-201ENST00000569826 507 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 AC009127.3-201ENST00000570531 403 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 SNORD53-201ENST00000579969 78 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 NBR2-204ENST00000587322 63 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 AC243829.7-201ENST00000633081 225 ntBASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.72□□□□□ -2.13
CCL28Q9NRJ3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
CCL28Q9NRJ3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CCL28Q9NRJ3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CCL28Q9NRJ3 Y_RNA.1-201ENST00000352915 104 ntBASIC1.71□□□□□ -2.14
CCL28Q9NRJ3 RNU6-212P-201ENST00000362642 104 ntBASIC1.71□□□□□ -2.14
CCL28Q9NRJ3 Y_RNA.51-201ENST00000362725 102 ntBASIC1.71□□□□□ -2.14
CCL28Q9NRJ3 RNU6-996P-201ENST00000365438 107 ntBASIC1.71□□□□□ -2.14
CCL28Q9NRJ3 RNU6-1032P-201ENST00000384100 107 ntBASIC1.71□□□□□ -2.14
CCL28Q9NRJ3 AL591034.2-201ENST00000402839 359 ntBASIC1.71□□□□□ -2.14
CCL28Q9NRJ3 Z92545.1-201ENST00000411782 234 ntBASIC1.71□□□□□ -2.14
CCL28Q9NRJ3 AL591043.1-201ENST00000432461 424 ntBASIC1.71□□□□□ -2.14
CCL28Q9NRJ3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.71□□□□□ -2.14
CCL28Q9NRJ3 AC009238.1-201ENST00000442165 424 ntBASIC1.71□□□□□ -2.14
CCL28Q9NRJ3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.71□□□□□ -2.14
CCL28Q9NRJ3 AC009237.6-201ENST00000446969 424 ntBASIC1.71□□□□□ -2.14
CCL28Q9NRJ3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.71□□□□□ -2.14
CCL28Q9NRJ3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.71□□□□□ -2.14
CCL28Q9NRJ3 RNU6-586P-201ENST00000517265 104 ntBASIC1.71□□□□□ -2.14
CCL28Q9NRJ3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.71□□□□□ -2.14
CCL28Q9NRJ3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.71□□□□□ -2.14
CCL28Q9NRJ3 AL136363.2-201ENST00000604173 851 ntBASIC1.71□□□□□ -2.14
CCL28Q9NRJ3 AC007684.1-201ENST00000609671 477 ntBASIC1.71□□□□□ -2.14
CCL28Q9NRJ3 AC007792.1-201ENST00000623023 402 ntBASIC1.71□□□□□ -2.14
CCL28Q9NRJ3 MTND4P14-201ENST00000435799 1354 ntBASIC1.71□□□□□ -2.14
CCL28Q9NRJ3 MTND5P6-201ENST00000422338 1798 ntBASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.7□□□□□ -2.14
CCL28Q9NRJ3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms