Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 Y_RNA.279-201ENST00000364763 95 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 RNU1-100P-201ENST00000365255 165 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 Y_RNA.373-201ENST00000365600 103 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 RNU6-510P-201ENST00000391239 108 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 RAP1BP3-201ENST00000407180 549 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 RNU2-3P-201ENST00000410144 191 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 RPL7P37-201ENST00000425095 738 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.93□□□□□ -1.94
DDX4Q9NQI0 NDUFA5P4-201ENST00000436704 385 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.93□□□□□ -1.94
DDX4Q9NQI0 AL714022.1-201ENST00000439897 151 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 AC098831.1-201ENST00000440661 216 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.93□□□□□ -1.94
DDX4Q9NQI0 RPL23AP45-201ENST00000476406 468 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 RPS27AP10-201ENST00000496103 208 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 AIG1P1-201ENST00000503376 148 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 MTCO2P30-201ENST00000503662 364 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 AC234781.5-201ENST00000508429 271 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 FAM206BP-201ENST00000510179 541 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 RNU6-1183P-201ENST00000517054 60 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 HSPE1P20-201ENST00000538133 289 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.93□□□□□ -1.94
DDX4Q9NQI0 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.93□□□□□ -1.94
DDX4Q9NQI0 RPL23AP88-201ENST00000605759 454 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 AC046143.2-201ENST00000609789 160 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.93□□□□□ -1.94
DDX4Q9NQI0 ZNF519P1-201ENST00000449011 1626 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
DDX4Q9NQI0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.93□□□□□ -1.94
DDX4Q9NQI0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.92□□□□□ -1.94
DDX4Q9NQI0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
DDX4Q9NQI0 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
DDX4Q9NQI0 SNORD3E-201ENST00000362899 217 ntBASIC2.92□□□□□ -1.94
DDX4Q9NQI0 Y_RNA.167-201ENST00000363735 109 ntBASIC2.92□□□□□ -1.94
DDX4Q9NQI0 RNU6-266P-201ENST00000364225 107 ntBASIC2.92□□□□□ -1.94
DDX4Q9NQI0 MIR627-201ENST00000384979 97 ntBASIC2.92□□□□□ -1.94
DDX4Q9NQI0 AL356057.2-201ENST00000403318 432 ntBASIC2.92□□□□□ -1.94
DDX4Q9NQI0 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.92□□□□□ -1.94
DDX4Q9NQI0 AC098614.3-201ENST00000438957 440 ntBASIC2.92□□□□□ -1.94
DDX4Q9NQI0 RPL7P12-201ENST00000446719 750 ntBASIC2.92□□□□□ -1.94
DDX4Q9NQI0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.92□□□□□ -1.94
DDX4Q9NQI0 RN7SL297P-201ENST00000483161 293 ntBASIC2.92□□□□□ -1.94
DDX4Q9NQI0 RPS27P26-201ENST00000494583 239 ntBASIC2.92□□□□□ -1.94
DDX4Q9NQI0 RNU1-86P-201ENST00000516108 154 ntBASIC2.92□□□□□ -1.94
DDX4Q9NQI0 RNU1-107P-201ENST00000516617 154 ntBASIC2.92□□□□□ -1.94
DDX4Q9NQI0 AC087241.2-201ENST00000535801 324 ntBASIC2.92□□□□□ -1.94
DDX4Q9NQI0 AP000763.2-201ENST00000540641 163 ntBASIC2.92□□□□□ -1.94
DDX4Q9NQI0 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.92□□□□□ -1.94
DDX4Q9NQI0 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.92□□□□□ -1.94
DDX4Q9NQI0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
DDX4Q9NQI0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.92□□□□□ -1.94
DDX4Q9NQI0 AC087045.1-201ENST00000605856 382 ntBASIC2.92□□□□□ -1.94
DDX4Q9NQI0 AC103810.6-201ENST00000606708 136 ntBASIC2.92□□□□□ -1.94
DDX4Q9NQI0 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
DDX4Q9NQI0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.92□□□□□ -1.94
DDX4Q9NQI0 AL136221.1-201ENST00000621449 509 ntBASIC2.92□□□□□ -1.94
DDX4Q9NQI0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.91□□□□□ -1.94
DDX4Q9NQI0 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.91□□□□□ -1.94
DDX4Q9NQI0 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.91□□□□□ -1.94
DDX4Q9NQI0 SNORA72.1-201ENST00000363485 129 ntBASIC2.91□□□□□ -1.94
DDX4Q9NQI0 RNA5SP456-201ENST00000364002 114 ntBASIC2.91□□□□□ -1.94
DDX4Q9NQI0 Y_RNA.324-201ENST00000365165 102 ntBASIC2.91□□□□□ -1.94
DDX4Q9NQI0 RNY3P14-201ENST00000384309 102 ntBASIC2.91□□□□□ -1.94
DDX4Q9NQI0 MIR10A-201ENST00000385043 110 ntBASIC2.91□□□□□ -1.94
DDX4Q9NQI0 CYCSP33-201ENST00000414485 327 ntBASIC2.91□□□□□ -1.94
DDX4Q9NQI0 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.91□□□□□ -1.94
DDX4Q9NQI0 BPY2DP-201ENST00000422208 265 ntBASIC2.91□□□□□ -1.94
DDX4Q9NQI0 MTCO3P46-201ENST00000425787 232 ntBASIC2.91□□□□□ -1.94
DDX4Q9NQI0 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.91□□□□□ -1.94
DDX4Q9NQI0 AC010095.1-201ENST00000443543 144 ntBASIC2.91□□□□□ -1.94
DDX4Q9NQI0 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.91□□□□□ -1.94
DDX4Q9NQI0 AL513124.1-201ENST00000450410 614 ntBASIC2.91□□□□□ -1.94
DDX4Q9NQI0 BTF3P15-201ENST00000455606 336 ntBASIC2.91□□□□□ -1.94
DDX4Q9NQI0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.91□□□□□ -1.94
DDX4Q9NQI0 AC133134.1-201ENST00000466800 359 ntBASIC2.91□□□□□ -1.94
DDX4Q9NQI0 RPL23AP70-201ENST00000483361 460 ntBASIC2.91□□□□□ -1.94
DDX4Q9NQI0 AC083904.1-201ENST00000487828 231 ntBASIC2.91□□□□□ -1.94
DDX4Q9NQI0 YWHAEP4-201ENST00000505390 198 ntBASIC2.91□□□□□ -1.94
DDX4Q9NQI0 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.91□□□□□ -1.94
DDX4Q9NQI0 AC046134.1-201ENST00000514454 666 ntBASIC2.91□□□□□ -1.94
DDX4Q9NQI0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.91□□□□□ -1.94
DDX4Q9NQI0 RNU6-1069P-201ENST00000516612 133 ntBASIC2.91□□□□□ -1.94
DDX4Q9NQI0 SNORA25.17-201ENST00000517184 124 ntBASIC2.91□□□□□ -1.94
DDX4Q9NQI0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.91□□□□□ -1.94
DDX4Q9NQI0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.91□□□□□ -1.94
DDX4Q9NQI0 LINC00933-203ENST00000559812 219 ntBASIC2.91□□□□□ -1.94
DDX4Q9NQI0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.91□□□□□ -1.94
DDX4Q9NQI0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
DDX4Q9NQI0 SCARNA4-202ENST00000625402 129 ntBASIC2.91□□□□□ -1.94
DDX4Q9NQI0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.91□□□□□ -1.94
DDX4Q9NQI0 AC008669.1-201ENST00000565823 2178 ntBASIC2.91□□□□□ -1.94
DDX4Q9NQI0 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.9□□□□□ -1.94
DDX4Q9NQI0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
DDX4Q9NQI0 U8.2-201ENST00000363156 134 ntBASIC2.9□□□□□ -1.95
DDX4Q9NQI0 RNU6-1303P-201ENST00000364841 107 ntBASIC2.9□□□□□ -1.95
DDX4Q9NQI0 RNU6-384P-201ENST00000364900 104 ntBASIC2.9□□□□□ -1.95
DDX4Q9NQI0 RNU1-109P-201ENST00000383960 147 ntBASIC2.9□□□□□ -1.95
DDX4Q9NQI0 Y_RNA.414-201ENST00000384011 101 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms