Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
VPS11Q9H270 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS11Q9H270 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS11Q9H270 FTLP6-201ENST00000355274 422 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 Y_RNA.81-201ENST00000362997 102 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 RNU6-704P-201ENST00000364162 103 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 RNU6-371P-201ENST00000364283 108 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 Y_RNA.458-201ENST00000384240 102 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 SNORD115-46-201ENST00000390982 71 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 MRPL35P1-201ENST00000404272 572 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 RNU6-325P-201ENST00000411132 105 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 COX6CP10-201ENST00000416832 224 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 AL160275.3-201ENST00000423876 471 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 AC096920.1-201ENST00000423991 241 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 AL592045.1-201ENST00000429867 352 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 SNRPEP9-201ENST00000436794 238 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 AC067942.3-201ENST00000512025 362 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 RN7SKP122-201ENST00000515923 296 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 RNU6-911P-201ENST00000516523 104 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 RNU6-861P-201ENST00000516745 106 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 RNU6-928P-201ENST00000516876 104 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.7□□□□□ -1.82
VPS11Q9H270 AC144568.1-201ENST00000520139 137 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 AC008011.1-201ENST00000545989 227 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VPS11Q9H270 MZT1P2-201ENST00000604387 248 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS11Q9H270 AL591516.1-201ENST00000611326 274 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS11Q9H270 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.7□□□□□ -1.82
VPS11Q9H270 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS11Q9H270 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS11Q9H270 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
VPS11Q9H270 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS11Q9H270 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS11Q9H270 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS11Q9H270 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS11Q9H270 RNU1-76P-201ENST00000362903 159 ntBASIC3.69□□□□□ -1.82
VPS11Q9H270 RNU6-270P-201ENST00000364131 105 ntBASIC3.69□□□□□ -1.82
VPS11Q9H270 RNA5SP42-201ENST00000364278 115 ntBASIC3.69□□□□□ -1.82
VPS11Q9H270 SNORA70.2-201ENST00000364506 135 ntBASIC3.69□□□□□ -1.82
VPS11Q9H270 AC068538.1-201ENST00000376856 336 ntBASIC3.69□□□□□ -1.82
VPS11Q9H270 RNY1P5-201ENST00000383890 115 ntBASIC3.69□□□□□ -1.82
VPS11Q9H270 MIR301A-201ENST00000385261 86 ntBASIC3.69□□□□□ -1.82
VPS11Q9H270 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
VPS11Q9H270 Y_RNA.592-201ENST00000410274 109 ntBASIC3.69□□□□□ -1.82
VPS11Q9H270 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS11Q9H270 RPL23AP82-202ENST00000427528 469 ntBASIC3.69□□□□□ -1.82
VPS11Q9H270 AC092423.1-201ENST00000430165 186 ntBASIC3.69□□□□□ -1.82
VPS11Q9H270 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS11Q9H270 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS11Q9H270 AC008264.1-201ENST00000447612 367 ntBASIC3.69□□□□□ -1.82
VPS11Q9H270 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS11Q9H270 RPL23AP14-201ENST00000468281 468 ntBASIC3.69□□□□□ -1.82
VPS11Q9H270 RPS29P26-201ENST00000477483 171 ntBASIC3.69□□□□□ -1.82
VPS11Q9H270 RPS15AP34-201ENST00000487776 387 ntBASIC3.69□□□□□ -1.82
VPS11Q9H270 RPS23P5-201ENST00000495419 428 ntBASIC3.69□□□□□ -1.82
VPS11Q9H270 AC010469.2-201ENST00000496412 480 ntBASIC3.69□□□□□ -1.82
VPS11Q9H270 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS11Q9H270 SNORA25.14-201ENST00000516481 132 ntBASIC3.69□□□□□ -1.82
VPS11Q9H270 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS11Q9H270 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS11Q9H270 MIR4300-201ENST00000581016 96 ntBASIC3.69□□□□□ -1.82
VPS11Q9H270 MIR3976-201ENST00000606807 139 ntBASIC3.69□□□□□ -1.82
VPS11Q9H270 MIR15A-201ENST00000607334 83 ntBASIC3.69□□□□□ -1.82
VPS11Q9H270 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VPS11Q9H270 MIR492-201ENST00000638676 116 ntBASIC3.69□□□□□ -1.82
VPS11Q9H270 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS11Q9H270 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS11Q9H270 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS11Q9H270 PWAR6-201ENST00000552334 4618 ntBASIC3.69□□□□□ -1.82
VPS11Q9H270 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS11Q9H270 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
VPS11Q9H270 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS11Q9H270 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS11Q9H270 Y_RNA.76-201ENST00000362931 109 ntBASIC3.68□□□□□ -1.82
VPS11Q9H270 RNU6-81P-201ENST00000365608 104 ntBASIC3.68□□□□□ -1.82
VPS11Q9H270 RNU6-790P-201ENST00000384479 105 ntBASIC3.68□□□□□ -1.82
VPS11Q9H270 RNU6-1081P-201ENST00000384537 107 ntBASIC3.68□□□□□ -1.82
VPS11Q9H270 Y_RNA.541-201ENST00000384640 113 ntBASIC3.68□□□□□ -1.82
VPS11Q9H270 MIR613-201ENST00000385248 95 ntBASIC3.68□□□□□ -1.82
VPS11Q9H270 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
VPS11Q9H270 EI24P2-201ENST00000397776 1076 ntBASIC3.68□□□□□ -1.82
VPS11Q9H270 AC073063.1-201ENST00000434352 607 ntBASIC3.68□□□□□ -1.82
VPS11Q9H270 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS11Q9H270 AL360271.2-201ENST00000447710 161 ntBASIC3.68□□□□□ -1.82
VPS11Q9H270 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS11Q9H270 RPL21P41-201ENST00000459863 264 ntBASIC3.68□□□□□ -1.82
VPS11Q9H270 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS11Q9H270 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.68□□□□□ -1.82
VPS11Q9H270 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.68□□□□□ -1.82
VPS11Q9H270 AC022559.1-201ENST00000520905 205 ntBASIC3.68□□□□□ -1.82
VPS11Q9H270 AP000867.2-201ENST00000532468 320 ntBASIC3.68□□□□□ -1.82
VPS11Q9H270 AC024405.2-202ENST00000532731 184 ntBASIC3.68□□□□□ -1.82
VPS11Q9H270 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.68□□□□□ -1.82
VPS11Q9H270 TRAV32-201ENST00000553993 340 ntBASIC3.68□□□□□ -1.82
VPS11Q9H270 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS11Q9H270 CPDP1-201ENST00000579660 283 ntBASIC3.68□□□□□ -1.82
VPS11Q9H270 MIR4273-201ENST00000582824 84 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms