Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 AL031121.1-201ENST00000406553 254 ntBASIC3.31□□□□□ -1.88
VPS16Q9H269 Y_RNA.594-201ENST00000410373 140 ntBASIC3.31□□□□□ -1.88
VPS16Q9H269 AL353621.1-201ENST00000418219 243 ntBASIC3.31□□□□□ -1.88
VPS16Q9H269 AC007560.1-201ENST00000426912 237 ntBASIC3.31□□□□□ -1.88
VPS16Q9H269 AC005326.1-201ENST00000429197 123 ntBASIC3.31□□□□□ -1.88
VPS16Q9H269 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS16Q9H269 AL714022.1-201ENST00000439897 151 ntBASIC3.31□□□□□ -1.88
VPS16Q9H269 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS16Q9H269 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.31□□□□□ -1.88
VPS16Q9H269 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS16Q9H269 PRSS3P4-201ENST00000453323 162 ntBASIC3.31□□□□□ -1.88
VPS16Q9H269 AC034236.1-201ENST00000469891 373 ntBASIC3.31□□□□□ -1.88
VPS16Q9H269 AC128713.1-201ENST00000471495 306 ntBASIC3.31□□□□□ -1.88
VPS16Q9H269 AC109925.1-201ENST00000478069 331 ntBASIC3.31□□□□□ -1.88
VPS16Q9H269 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VPS16Q9H269 AL391261.3-201ENST00000557194 520 ntBASIC3.31□□□□□ -1.88
VPS16Q9H269 MIR4782-201ENST00000577987 79 ntBASIC3.31□□□□□ -1.88
VPS16Q9H269 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS16Q9H269 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS16Q9H269 AL645944.1-201ENST00000603857 493 ntBASIC3.31□□□□□ -1.88
VPS16Q9H269 MIR92B-201ENST00000607575 96 ntBASIC3.31□□□□□ -1.88
VPS16Q9H269 AC133104.2-201ENST00000615272 193 ntBASIC3.31□□□□□ -1.88
VPS16Q9H269 AL161629.2-201ENST00000615347 275 ntBASIC3.31□□□□□ -1.88
VPS16Q9H269 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.31□□□□□ -1.88
VPS16Q9H269 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
VPS16Q9H269 Y_RNA.193-201ENST00000363979 102 ntBASIC3.3□□□□□ -1.88
VPS16Q9H269 Y_RNA.252-201ENST00000364556 101 ntBASIC3.3□□□□□ -1.88
VPS16Q9H269 RNU6-26P-201ENST00000383985 107 ntBASIC3.3□□□□□ -1.88
VPS16Q9H269 Y_RNA.480-201ENST00000384364 102 ntBASIC3.3□□□□□ -1.88
VPS16Q9H269 RNY1P14-201ENST00000384426 108 ntBASIC3.3□□□□□ -1.88
VPS16Q9H269 RNU6-505P-201ENST00000384427 107 ntBASIC3.3□□□□□ -1.88
VPS16Q9H269 RNU6-95P-201ENST00000384697 107 ntBASIC3.3□□□□□ -1.88
VPS16Q9H269 RNA5SP252-201ENST00000391131 119 ntBASIC3.3□□□□□ -1.88
VPS16Q9H269 RNU1-101P-201ENST00000391171 127 ntBASIC3.3□□□□□ -1.88
VPS16Q9H269 RPS4XP7-201ENST00000406274 780 ntBASIC3.3□□□□□ -1.88
VPS16Q9H269 RN7SKP58-201ENST00000411010 305 ntBASIC3.3□□□□□ -1.88
VPS16Q9H269 RNU6-607P-201ENST00000411283 108 ntBASIC3.3□□□□□ -1.88
VPS16Q9H269 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.3□□□□□ -1.88
VPS16Q9H269 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.3□□□□□ -1.88
VPS16Q9H269 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS16Q9H269 AL078601.1-201ENST00000444542 271 ntBASIC3.3□□□□□ -1.88
VPS16Q9H269 MTCO2P24-201ENST00000515611 426 ntBASIC3.3□□□□□ -1.88
VPS16Q9H269 SNORA31.26-201ENST00000517250 137 ntBASIC3.3□□□□□ -1.88
VPS16Q9H269 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.3□□□□□ -1.88
VPS16Q9H269 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS16Q9H269 RNU6-323P-201ENST00000521915 107 ntBASIC3.3□□□□□ -1.88
VPS16Q9H269 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS16Q9H269 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS16Q9H269 H3F3AP1-201ENST00000559984 334 ntBASIC3.3□□□□□ -1.88
VPS16Q9H269 MIR3149-201ENST00000584629 83 ntBASIC3.3□□□□□ -1.88
VPS16Q9H269 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS16Q9H269 AC018462.2-201ENST00000605375 395 ntBASIC3.3□□□□□ -1.88
VPS16Q9H269 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VPS16Q9H269 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.3□□□□□ -1.88
VPS16Q9H269 AC004852.3-201ENST00000614131 326 ntBASIC3.3□□□□□ -1.88
VPS16Q9H269 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
VPS16Q9H269 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS16Q9H269 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.3□□□□□ -1.88
VPS16Q9H269 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
VPS16Q9H269 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VPS16Q9H269 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.29□□□□□ -1.88
VPS16Q9H269 SNORA14A-201ENST00000364773 135 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 RNA5SP267-201ENST00000364893 126 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 AC117470.1-201ENST00000381974 330 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 RNU6-128P-201ENST00000383976 107 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 Y_RNA.452-201ENST00000384202 108 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 Y_RNA.527-201ENST00000384573 102 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 RNU6-658P-201ENST00000384606 106 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 RNVU1-14-201ENST00000384770 164 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 SNORA75.6-201ENST00000391318 127 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 RNU6-1050P-201ENST00000410388 107 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 Y_RNA.623-201ENST00000411128 95 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 HMGB3P2-201ENST00000411913 584 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS16Q9H269 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS16Q9H269 AL627311.1-201ENST00000431514 115 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS16Q9H269 AL031183.1-201ENST00000457667 207 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 RNU7-23P-201ENST00000459465 62 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 MTND3P25-201ENST00000509243 135 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 RNU6-120P-201ENST00000516077 103 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 RNU6-764P-201ENST00000516396 105 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 Y_RNA.708-201ENST00000516950 96 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS16Q9H269 LRRC37A5P-203ENST00000580181 585 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS16Q9H269 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS16Q9H269 ATP5A1P2-202ENST00000616464 443 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 AL031601.2-202ENST00000622650 282 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 MIR622-201ENST00000638396 96 ntBASIC3.29□□□□□ -1.88
VPS16Q9H269 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.29□□□□□ -1.88
VPS16Q9H269 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.29□□□□□ -1.88
VPS16Q9H269 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.29□□□□□ -1.88
VPS16Q9H269 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
VPS16Q9H269 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VPS16Q9H269 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.28□□□□□ -1.88
VPS16Q9H269 RNU6-1303P-201ENST00000364841 107 ntBASIC3.28□□□□□ -1.88
VPS16Q9H269 SNORA51.4-201ENST00000364993 124 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms