Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 HAUS6P2-201ENST00000433254 2404 ntBASIC1.04□□□□□ -2.24
TRIM4Q9C037 RNU6-289P-201ENST00000364093 107 ntBASIC1.04□□□□□ -2.24
TRIM4Q9C037 PIGPP2-201ENST00000411569 458 ntBASIC1.04□□□□□ -2.24
TRIM4Q9C037 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.04□□□□□ -2.24
TRIM4Q9C037 NCOR1P3-201ENST00000420479 303 ntBASIC1.04□□□□□ -2.24
TRIM4Q9C037 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.04□□□□□ -2.24
TRIM4Q9C037 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.04□□□□□ -2.24
TRIM4Q9C037 AL135790.2-201ENST00000437701 267 ntBASIC1.04□□□□□ -2.24
TRIM4Q9C037 MTCO1P44-201ENST00000441935 243 ntBASIC1.04□□□□□ -2.24
TRIM4Q9C037 MTCYBP42-201ENST00000444653 1130 ntBASIC1.04□□□□□ -2.24
TRIM4Q9C037 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.04□□□□□ -2.24
TRIM4Q9C037 DUXAP8-207ENST00000456786 622 ntBASIC1.04□□□□□ -2.24
TRIM4Q9C037 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.04□□□□□ -2.24
TRIM4Q9C037 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.04□□□□□ -2.24
TRIM4Q9C037 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.04□□□□□ -2.24
TRIM4Q9C037 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.04□□□□□ -2.24
TRIM4Q9C037 DEFB131D-201ENST00000526803 184 ntBASIC1.04□□□□□ -2.24
TRIM4Q9C037 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
TRIM4Q9C037 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.04□□□□□ -2.24
TRIM4Q9C037 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.04□□□□□ -2.24
TRIM4Q9C037 VN1R107P-201ENST00000601784 209 ntBASIC1.04□□□□□ -2.24
TRIM4Q9C037 AP003485.1-201ENST00000625093 753 ntBASIC1.04□□□□□ -2.24
TRIM4Q9C037 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
TRIM4Q9C037 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
TRIM4Q9C037 RNU6-858P-201ENST00000362436 107 ntBASIC1.03□□□□□ -2.24
TRIM4Q9C037 RNU6-743P-201ENST00000364151 106 ntBASIC1.03□□□□□ -2.24
TRIM4Q9C037 AL603865.2-201ENST00000401679 213 ntBASIC1.03□□□□□ -2.24
TRIM4Q9C037 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.03□□□□□ -2.24
TRIM4Q9C037 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.03□□□□□ -2.24
TRIM4Q9C037 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.03□□□□□ -2.24
TRIM4Q9C037 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.03□□□□□ -2.24
TRIM4Q9C037 RPS26P55-201ENST00000471178 356 ntBASIC1.03□□□□□ -2.24
TRIM4Q9C037 AC108729.1-201ENST00000487812 947 ntBASIC1.03□□□□□ -2.24
TRIM4Q9C037 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.03□□□□□ -2.24
TRIM4Q9C037 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.03□□□□□ -2.24
TRIM4Q9C037 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.03□□□□□ -2.24
TRIM4Q9C037 CYP3A137P-201ENST00000562436 69 ntBASIC1.03□□□□□ -2.24
TRIM4Q9C037 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.03□□□□□ -2.24
TRIM4Q9C037 AP001981.2-201ENST00000603241 418 ntBASIC1.03□□□□□ -2.24
TRIM4Q9C037 AC092140.2-201ENST00000618027 521 ntBASIC1.03□□□□□ -2.24
TRIM4Q9C037 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.03□□□□□ -2.24
TRIM4Q9C037 AL138955.1-201ENST00000622881 1040 ntBASIC1.03□□□□□ -2.24
TRIM4Q9C037 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
TRIM4Q9C037 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
TRIM4Q9C037 RNU6-236P-201ENST00000363886 106 ntBASIC1.02□□□□□ -2.25
TRIM4Q9C037 RNU6-853P-201ENST00000364306 107 ntBASIC1.02□□□□□ -2.25
TRIM4Q9C037 MIR19A-201ENST00000384878 82 ntBASIC1.02□□□□□ -2.25
TRIM4Q9C037 MTCO2P1-201ENST00000424648 477 ntBASIC1.02□□□□□ -2.25
TRIM4Q9C037 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.02□□□□□ -2.25
TRIM4Q9C037 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.02□□□□□ -2.25
TRIM4Q9C037 AL035666.1-201ENST00000446195 348 ntBASIC1.02□□□□□ -2.25
TRIM4Q9C037 RNU7-59P-201ENST00000459101 61 ntBASIC1.02□□□□□ -2.25
TRIM4Q9C037 RPL30P12-201ENST00000474666 353 ntBASIC1.02□□□□□ -2.25
TRIM4Q9C037 MED28P2-201ENST00000475771 317 ntBASIC1.02□□□□□ -2.25
TRIM4Q9C037 SNORA31.16-201ENST00000516773 139 ntBASIC1.02□□□□□ -2.25
TRIM4Q9C037 RNU6-143P-201ENST00000516942 93 ntBASIC1.02□□□□□ -2.25
TRIM4Q9C037 RNU6-334P-201ENST00000517072 102 ntBASIC1.02□□□□□ -2.25
TRIM4Q9C037 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.02□□□□□ -2.25
TRIM4Q9C037 AP006587.4-201ENST00000526053 529 ntBASIC1.02□□□□□ -2.25
TRIM4Q9C037 SNORA77B-201ENST00000578179 125 ntBASIC1.02□□□□□ -2.25
TRIM4Q9C037 MIR4293-201ENST00000584305 78 ntBASIC1.02□□□□□ -2.25
TRIM4Q9C037 VN1R83P-201ENST00000595685 445 ntBASIC1.02□□□□□ -2.25
TRIM4Q9C037 RPL21P136-201ENST00000605378 396 ntBASIC1.02□□□□□ -2.25
TRIM4Q9C037 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.02□□□□□ -2.25
TRIM4Q9C037 AL121890.5-201ENST00000620848 304 ntBASIC1.02□□□□□ -2.25
TRIM4Q9C037 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
TRIM4Q9C037 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
TRIM4Q9C037 MIR373-201ENST00000362273 69 ntBASIC1.01□□□□□ -2.25
TRIM4Q9C037 Y_RNA.99-201ENST00000363138 105 ntBASIC1.01□□□□□ -2.25
TRIM4Q9C037 RNU6-23P-201ENST00000363283 107 ntBASIC1.01□□□□□ -2.25
TRIM4Q9C037 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.01□□□□□ -2.25
TRIM4Q9C037 SNORA40C-201ENST00000391285 128 ntBASIC1.01□□□□□ -2.25
TRIM4Q9C037 RAC1P6-201ENST00000423911 575 ntBASIC1.01□□□□□ -2.25
TRIM4Q9C037 RPS27P16-201ENST00000425758 201 ntBASIC1.01□□□□□ -2.25
TRIM4Q9C037 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.01□□□□□ -2.25
TRIM4Q9C037 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.01□□□□□ -2.25
TRIM4Q9C037 RPL23AP35-201ENST00000451906 501 ntBASIC1.01□□□□□ -2.25
TRIM4Q9C037 AC092989.1-201ENST00000481235 277 ntBASIC1.01□□□□□ -2.25
TRIM4Q9C037 RPL39P36-201ENST00000490784 156 ntBASIC1.01□□□□□ -2.25
TRIM4Q9C037 AC093259.1-201ENST00000509755 300 ntBASIC1.01□□□□□ -2.25
TRIM4Q9C037 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
TRIM4Q9C037 RNA5SP330-201ENST00000517096 96 ntBASIC1.01□□□□□ -2.25
TRIM4Q9C037 RNU6-64P-201ENST00000517119 105 ntBASIC1.01□□□□□ -2.25
TRIM4Q9C037 CBX3P8-201ENST00000532412 525 ntBASIC1.01□□□□□ -2.25
TRIM4Q9C037 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.01□□□□□ -2.25
TRIM4Q9C037 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.01□□□□□ -2.25
TRIM4Q9C037 BNIP3P9-201ENST00000603714 553 ntBASIC1.01□□□□□ -2.25
TRIM4Q9C037 AC090186.1-201ENST00000605991 572 ntBASIC1.01□□□□□ -2.25
TRIM4Q9C037 AL355802.3-201ENST00000607571 545 ntBASIC1.01□□□□□ -2.25
TRIM4Q9C037 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.01□□□□□ -2.25
TRIM4Q9C037 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.01□□□□□ -2.25
TRIM4Q9C037 AC093648.1-201ENST00000623546 606 ntBASIC1.01□□□□□ -2.25
TRIM4Q9C037 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
TRIM4Q9C037 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.01□□□□□ -2.25
TRIM4Q9C037 RNU6-655P-201ENST00000362858 107 ntBASIC1□□□□□ -2.25
TRIM4Q9C037 RNU6-529P-201ENST00000363383 104 ntBASIC1□□□□□ -2.25
TRIM4Q9C037 RNU6-1222P-201ENST00000384615 107 ntBASIC1□□□□□ -2.25
TRIM4Q9C037 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1□□□□□ -2.25
TRIM4Q9C037 MTCO1P56-201ENST00000401674 224 ntBASIC1□□□□□ -2.25
TRIM4Q9C037 TIMM9P2-201ENST00000419324 266 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 155.4 ms