Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 Y_RNA.65-201ENST00000362846 100 ntBASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 AL079342.1-201ENST00000401460 267 ntBASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 RNU6ATAC-201ENST00000408749 126 ntBASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 RNU2-37P-201ENST00000410695 177 ntBASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 AL591043.1-201ENST00000432461 424 ntBASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 GOT2P5-201ENST00000433995 546 ntBASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 Z82188.1-201ENST00000436709 154 ntBASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 HMGN2P21-201ENST00000447764 270 ntBASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 snoU13.30-201ENST00000458951 104 ntBASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 AC078817.1-201ENST00000492623 435 ntBASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 RN7SKP83-201ENST00000516512 178 ntBASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 AC022868.1-201ENST00000517767 391 ntBASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 MIR6868-201ENST00000611215 58 ntBASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 AC240442.1-201ENST00000616055 283 ntBASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.99□□□□□ -1.77
FOXP3Q9BZS1 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 Y_RNA.277-201ENST00000364754 102 ntBASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 Y_RNA.541-201ENST00000384640 113 ntBASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 MIR199A2-201ENST00000385289 110 ntBASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 SNORD78.2-201ENST00000391076 69 ntBASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 RNA5SP31-201ENST00000411144 127 ntBASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 AL139156.1-201ENST00000412785 841 ntBASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 AL691449.1-201ENST00000426570 421 ntBASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 AP000907.1-201ENST00000428428 510 ntBASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 AC007389.2-201ENST00000434630 306 ntBASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 AL358232.1-201ENST00000448030 501 ntBASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 AL136097.1-201ENST00000456945 913 ntBASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 TOMM22P6-201ENST00000465035 409 ntBASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 TRBV12-2-201ENST00000489763 344 ntBASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 HSPE1P5-201ENST00000561489 272 ntBASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 MIR5685-201ENST00000579080 79 ntBASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 MIR4444-1-201ENST00000581696 74 ntBASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 MIR4444-2-201ENST00000584390 74 ntBASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 SCARNA4-201ENST00000629045 128 ntBASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.98□□□□□ -1.77
FOXP3Q9BZS1 AC118273.1-201ENST00000525324 3006 ntBASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 AC233981.2-201ENST00000611524 1614 ntBASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 RNU6-1301P-201ENST00000362724 104 ntBASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 Y_RNA.269-201ENST00000364685 89 ntBASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 AC124916.1-201ENST00000444020 547 ntBASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 AL138752.1-201ENST00000452964 351 ntBASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 SNRPGP3-201ENST00000469405 227 ntBASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 RNU2-58P-201ENST00000516403 183 ntBASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 RNU6-703P-201ENST00000516946 107 ntBASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 AP004242.1-201ENST00000533701 349 ntBASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 YPEL5P3-201ENST00000547227 352 ntBASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 ZNF192P1-203ENST00000565888 810 ntBASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 MIR4782-201ENST00000577987 79 ntBASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 AC010928.2-201ENST00000588017 287 ntBASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 AL137849.1-201ENST00000604767 169 ntBASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 U6.99-201ENST00000637524 83 ntBASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
FOXP3Q9BZS1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.96□□□□□ -1.78
FOXP3Q9BZS1 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.96□□□□□ -1.78
FOXP3Q9BZS1 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
FOXP3Q9BZS1 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.96□□□□□ -1.78
FOXP3Q9BZS1 Y_RNA.150-201ENST00000363562 102 ntBASIC3.96□□□□□ -1.78
FOXP3Q9BZS1 Y_RNA.200-201ENST00000364018 102 ntBASIC3.96□□□□□ -1.78
FOXP3Q9BZS1 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
FOXP3Q9BZS1 U1.1-201ENST00000384101 164 ntBASIC3.96□□□□□ -1.78
FOXP3Q9BZS1 RNU6-17P-201ENST00000384245 107 ntBASIC3.96□□□□□ -1.78
FOXP3Q9BZS1 RNU6-18P-201ENST00000384527 107 ntBASIC3.96□□□□□ -1.78
FOXP3Q9BZS1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
FOXP3Q9BZS1 PTMAP5-201ENST00000393073 333 ntBASIC3.96□□□□□ -1.78
FOXP3Q9BZS1 U3.37-201ENST00000408528 213 ntBASIC3.96□□□□□ -1.78
FOXP3Q9BZS1 AC092047.1-201ENST00000424997 240 ntBASIC3.96□□□□□ -1.78
FOXP3Q9BZS1 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.96□□□□□ -1.78
FOXP3Q9BZS1 AC104332.1-201ENST00000440471 797 ntBASIC3.96□□□□□ -1.78
FOXP3Q9BZS1 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
FOXP3Q9BZS1 MED28P2-201ENST00000475771 317 ntBASIC3.96□□□□□ -1.78
FOXP3Q9BZS1 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.96□□□□□ -1.78
FOXP3Q9BZS1 SNORA43.2-201ENST00000516652 128 ntBASIC3.96□□□□□ -1.78
FOXP3Q9BZS1 RNU6-789P-201ENST00000517105 102 ntBASIC3.96□□□□□ -1.78
FOXP3Q9BZS1 CYCSP39-201ENST00000565821 309 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms