Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AL589872.1-201ENST00000426602 288 ntBASIC0.33□□□□□ -2.36
SCAPERQ9BY12 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.33□□□□□ -2.36
SCAPERQ9BY12 AC092001.1-201ENST00000453012 261 ntBASIC0.33□□□□□ -2.36
SCAPERQ9BY12 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
SCAPERQ9BY12 PDCD5P2-201ENST00000507570 312 ntBASIC0.33□□□□□ -2.36
SCAPERQ9BY12 MTCYBP43-201ENST00000513621 740 ntBASIC0.33□□□□□ -2.36
SCAPERQ9BY12 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
SCAPERQ9BY12 RNU4-54P-201ENST00000516428 129 ntBASIC0.33□□□□□ -2.36
SCAPERQ9BY12 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.33□□□□□ -2.36
SCAPERQ9BY12 AP003392.2-201ENST00000527269 208 ntBASIC0.33□□□□□ -2.36
SCAPERQ9BY12 AC015688.6-201ENST00000577737 104 ntBASIC0.33□□□□□ -2.36
SCAPERQ9BY12 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.33□□□□□ -2.36
SCAPERQ9BY12 AL138726.1-201ENST00000614873 333 ntBASIC0.33□□□□□ -2.36
SCAPERQ9BY12 AC068205.3-201ENST00000636385 468 ntBASIC0.33□□□□□ -2.36
SCAPERQ9BY12 AC092447.10-201ENST00000620607 1652 ntBASIC0.33□□□□□ -2.36
SCAPERQ9BY12 RNU6-23P-201ENST00000363283 107 ntBASIC0.32□□□□□ -2.36
SCAPERQ9BY12 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
SCAPERQ9BY12 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.32□□□□□ -2.36
SCAPERQ9BY12 Y_RNA.476-201ENST00000384347 108 ntBASIC0.32□□□□□ -2.36
SCAPERQ9BY12 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.32□□□□□ -2.36
SCAPERQ9BY12 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.32□□□□□ -2.36
SCAPERQ9BY12 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.32□□□□□ -2.36
SCAPERQ9BY12 AL158211.4-201ENST00000606988 584 ntBASIC0.32□□□□□ -2.36
SCAPERQ9BY12 AC034229.4-201ENST00000607861 441 ntBASIC0.32□□□□□ -2.36
SCAPERQ9BY12 AC004908.3-201ENST00000610248 625 ntBASIC0.32□□□□□ -2.36
SCAPERQ9BY12 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.32□□□□□ -2.36
SCAPERQ9BY12 AC004009.2-201ENST00000623016 728 ntBASIC0.32□□□□□ -2.36
SCAPERQ9BY12 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.31□□□□□ -2.36
SCAPERQ9BY12 RNU6-296P-201ENST00000384608 107 ntBASIC0.31□□□□□ -2.36
SCAPERQ9BY12 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
SCAPERQ9BY12 C8orf59P1-201ENST00000429930 303 ntBASIC0.31□□□□□ -2.36
SCAPERQ9BY12 MTND1P16-201ENST00000465177 898 ntBASIC0.31□□□□□ -2.36
SCAPERQ9BY12 COX6CP6-201ENST00000490840 228 ntBASIC0.31□□□□□ -2.36
SCAPERQ9BY12 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.31□□□□□ -2.36
SCAPERQ9BY12 RNU6-1092P-201ENST00000516955 87 ntBASIC0.31□□□□□ -2.36
SCAPERQ9BY12 ACA59.2-201ENST00000517061 156 ntBASIC0.31□□□□□ -2.36
SCAPERQ9BY12 AC090142.3-201ENST00000519012 385 ntBASIC0.31□□□□□ -2.36
SCAPERQ9BY12 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.31□□□□□ -2.36
SCAPERQ9BY12 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.31□□□□□ -2.36
SCAPERQ9BY12 RNA5SP493-201ENST00000364115 91 ntBASIC0.3□□□□□ -2.36
SCAPERQ9BY12 RNU6-819P-201ENST00000364116 107 ntBASIC0.3□□□□□ -2.36
SCAPERQ9BY12 Y_RNA.471-201ENST00000384312 102 ntBASIC0.3□□□□□ -2.36
SCAPERQ9BY12 RNU6-110P-201ENST00000384508 104 ntBASIC0.3□□□□□ -2.36
SCAPERQ9BY12 AL133475.1-201ENST00000404414 305 ntBASIC0.3□□□□□ -2.36
SCAPERQ9BY12 AC010099.3-201ENST00000423896 409 ntBASIC0.3□□□□□ -2.36
SCAPERQ9BY12 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.3□□□□□ -2.36
SCAPERQ9BY12 RPS25P9-201ENST00000435591 252 ntBASIC0.3□□□□□ -2.36
SCAPERQ9BY12 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.3□□□□□ -2.36
SCAPERQ9BY12 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC0.3□□□□□ -2.36
SCAPERQ9BY12 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.3□□□□□ -2.36
SCAPERQ9BY12 AC095057.3-201ENST00000567102 1157 ntBASIC0.3□□□□□ -2.36
SCAPERQ9BY12 LARP7P2-201ENST00000575306 125 ntBASIC0.3□□□□□ -2.36
SCAPERQ9BY12 MIR3169-201ENST00000578032 83 ntBASIC0.3□□□□□ -2.36
SCAPERQ9BY12 AC040896.1-201ENST00000613819 479 ntBASIC0.3□□□□□ -2.36
SCAPERQ9BY12 MIR1912-201ENST00000410389 80 ntBASIC0.3□□□□□ -2.36
SCAPERQ9BY12 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.3□□□□□ -2.36
SCAPERQ9BY12 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.3□□□□□ -2.36
SCAPERQ9BY12 AC008267.5-201ENST00000424928 265 ntBASIC0.3□□□□□ -2.36
SCAPERQ9BY12 MTND2P5-201ENST00000432656 1006 ntBASIC0.3□□□□□ -2.36
SCAPERQ9BY12 TIMM9P1-201ENST00000436122 256 ntBASIC0.3□□□□□ -2.36
SCAPERQ9BY12 GTF2IP13-201ENST00000438487 386 ntBASIC0.3□□□□□ -2.36
SCAPERQ9BY12 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.3□□□□□ -2.36
SCAPERQ9BY12 AL096829.2-201ENST00000446582 742 ntBASIC0.3□□□□□ -2.36
SCAPERQ9BY12 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.3□□□□□ -2.36
SCAPERQ9BY12 TRBVB-201ENST00000477100 408 ntBASIC0.3□□□□□ -2.36
SCAPERQ9BY12 RPL7P43-201ENST00000478876 753 ntBASIC0.3□□□□□ -2.36
SCAPERQ9BY12 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.3□□□□□ -2.36
SCAPERQ9BY12 SNORA70.22-201ENST00000517160 124 ntBASIC0.3□□□□□ -2.36
SCAPERQ9BY12 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.3□□□□□ -2.36
SCAPERQ9BY12 AC011451.2-201ENST00000604303 598 ntBASIC0.3□□□□□ -2.36
SCAPERQ9BY12 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.3□□□□□ -2.36
SCAPERQ9BY12 AC080188.3-201ENST00000624842 748 ntBASIC0.3□□□□□ -2.36
SCAPERQ9BY12 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
SCAPERQ9BY12 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
SCAPERQ9BY12 RNU6-619P-201ENST00000365146 108 ntBASIC0.29□□□□□ -2.36
SCAPERQ9BY12 RNU6-1280P-201ENST00000365211 107 ntBASIC0.29□□□□□ -2.36
SCAPERQ9BY12 RNU1-39P-201ENST00000383897 165 ntBASIC0.29□□□□□ -2.36
SCAPERQ9BY12 RNU6-45P-201ENST00000384471 107 ntBASIC0.29□□□□□ -2.36
SCAPERQ9BY12 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.29□□□□□ -2.36
SCAPERQ9BY12 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.29□□□□□ -2.36
SCAPERQ9BY12 AL929288.2-201ENST00000446368 407 ntBASIC0.29□□□□□ -2.36
SCAPERQ9BY12 AL050341.1-201ENST00000447743 313 ntBASIC0.29□□□□□ -2.36
SCAPERQ9BY12 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
SCAPERQ9BY12 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.29□□□□□ -2.36
SCAPERQ9BY12 AC116655.1-201ENST00000508324 901 ntBASIC0.29□□□□□ -2.36
SCAPERQ9BY12 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.29□□□□□ -2.36
SCAPERQ9BY12 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.29□□□□□ -2.36
SCAPERQ9BY12 MIR4636-201ENST00000582271 80 ntBASIC0.29□□□□□ -2.36
SCAPERQ9BY12 AC010133.1-201ENST00000615809 842 ntBASIC0.29□□□□□ -2.36
SCAPERQ9BY12 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.29□□□□□ -2.36
SCAPERQ9BY12 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.29□□□□□ -2.36
SCAPERQ9BY12 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
SCAPERQ9BY12 SGO1P1-201ENST00000603525 1447 ntBASIC0.28□□□□□ -2.36
SCAPERQ9BY12 SNORD114-19-201ENST00000363072 75 ntBASIC0.28□□□□□ -2.37
SCAPERQ9BY12 RNU6-160P-201ENST00000384591 107 ntBASIC0.28□□□□□ -2.37
SCAPERQ9BY12 MIR7-1-201ENST00000384871 110 ntBASIC0.28□□□□□ -2.37
SCAPERQ9BY12 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.28□□□□□ -2.37
SCAPERQ9BY12 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.28□□□□□ -2.37
SCAPERQ9BY12 MTND2P21-201ENST00000436242 1042 ntBASIC0.28□□□□□ -2.37
SCAPERQ9BY12 HSPE1P9-201ENST00000440046 311 ntBASIC0.28□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms