Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 MIR412-201ENST00000362142 91 ntBASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 RNA5SP289-201ENST00000362332 137 ntBASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 SNORA72.1-201ENST00000363485 129 ntBASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 Y_RNA.157-201ENST00000363638 102 ntBASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 Z98749.2-208ENST00000381646 500 ntBASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 Y_RNA.399-201ENST00000383955 105 ntBASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 Y_RNA.604-201ENST00000410574 102 ntBASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 BX682237.1-201ENST00000415016 335 ntBASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 BPY2DP-201ENST00000422208 265 ntBASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 MTND3P10-201ENST00000450967 341 ntBASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 HMGN2P26-201ENST00000463169 339 ntBASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 RNU1-86P-201ENST00000516108 154 ntBASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 RNU1-107P-201ENST00000516617 154 ntBASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 SNORA20.3-201ENST00000516880 132 ntBASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 RNU6-1183P-201ENST00000517054 60 ntBASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 CKS1BP7-201ENST00000522230 235 ntBASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 AC023050.3-201ENST00000541142 333 ntBASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 OR11H5P-201ENST00000554039 926 ntBASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 MTCO3P13-201ENST00000577757 781 ntBASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 AC008739.2-201ENST00000597006 317 ntBASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 AC022418.1-201ENST00000624118 445 ntBASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 AC090617.10-201ENST00000624308 134 ntBASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 AC026241.1-201ENST00000517873 2142 ntBASIC2.68□□□□□ -1.98
RTP3Q9BQQ7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 Y_RNA.238-201ENST00000364441 102 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 RNU6-1303P-201ENST00000364841 107 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 RNU6-384P-201ENST00000364900 104 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 RNU1-100P-201ENST00000365255 165 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 MIR764-201ENST00000390811 85 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 AL356057.2-201ENST00000403318 432 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 AL162578.1-201ENST00000406202 378 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 MIR1289-2-201ENST00000408360 111 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 SNORD88.1-201ENST00000408684 91 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 RNU2-3P-201ENST00000410144 191 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 RNU4-26P-201ENST00000410270 107 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 Y_RNA.623-201ENST00000411128 95 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 RNU6-607P-201ENST00000411283 108 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 CYCSP33-201ENST00000414485 327 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 AL078601.1-201ENST00000444542 271 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 PRPS1P1-201ENST00000445305 876 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 NDUFB1P2-201ENST00000449477 176 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 RPS27AP9-201ENST00000477681 438 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 MTCO2P30-201ENST00000503662 364 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 AC114786.4-201ENST00000508771 728 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 AC098799.2-201ENST00000509466 868 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 LRRC37A5P-203ENST00000580181 585 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 AC005730.3-201ENST00000583067 366 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 AC018638.8-201ENST00000588755 281 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 AC005498.1-201ENST00000592125 465 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 AC092807.2-201ENST00000609367 243 ntBASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.67□□□□□ -1.98
RTP3Q9BQQ7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 RNU6-82P-201ENST00000363970 107 ntBASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 SNORD56.5-201ENST00000364281 72 ntBASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 RNU6-522P-201ENST00000364497 107 ntBASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 MIR767-201ENST00000390228 109 ntBASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 RNA5SP247-201ENST00000411181 105 ntBASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 AC023141.4-201ENST00000412031 328 ntBASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 RPL21P111-201ENST00000418453 477 ntBASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 ARL5AP1-201ENST00000418991 388 ntBASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 AL365496.1-201ENST00000426885 215 ntBASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 HMGB1P9-201ENST00000429856 646 ntBASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 AL627311.1-201ENST00000431514 115 ntBASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 HIGD1AP2-201ENST00000446367 280 ntBASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 RNU7-167P-201ENST00000459160 62 ntBASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 RNU6-1208P-201ENST00000459588 107 ntBASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 AC133134.1-201ENST00000466800 359 ntBASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 DYNLL1P5-201ENST00000467158 270 ntBASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 AC083904.1-201ENST00000487828 231 ntBASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 SEM1P1-201ENST00000506694 209 ntBASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.66□□□□□ -1.98
RTP3Q9BQQ7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms