Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.34□□□□□ -1.87
SMOQ99835 MRPS18CP6-201ENST00000423587 223 ntBASIC3.34□□□□□ -1.87
SMOQ99835 AC008267.5-201ENST00000424928 265 ntBASIC3.34□□□□□ -1.87
SMOQ99835 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.34□□□□□ -1.87
SMOQ99835 AC011816.1-201ENST00000441346 546 ntBASIC3.34□□□□□ -1.87
SMOQ99835 RPL37P4-201ENST00000448908 268 ntBASIC3.34□□□□□ -1.87
SMOQ99835 GSTA11P-201ENST00000452866 669 ntBASIC3.34□□□□□ -1.87
SMOQ99835 HMGN1P18-201ENST00000457642 277 ntBASIC3.34□□□□□ -1.87
SMOQ99835 RPS27AP10-201ENST00000496103 208 ntBASIC3.34□□□□□ -1.87
SMOQ99835 AC022447.4-201ENST00000504053 364 ntBASIC3.34□□□□□ -1.87
SMOQ99835 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.34□□□□□ -1.87
SMOQ99835 RNU6-377P-201ENST00000515965 102 ntBASIC3.34□□□□□ -1.87
SMOQ99835 RNU6-307P-201ENST00000516743 106 ntBASIC3.34□□□□□ -1.87
SMOQ99835 CBX3P8-201ENST00000532412 525 ntBASIC3.34□□□□□ -1.87
SMOQ99835 UBL5P2-201ENST00000583788 219 ntBASIC3.34□□□□□ -1.87
SMOQ99835 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.34□□□□□ -1.87
SMOQ99835 AC008962.1-201ENST00000605729 304 ntBASIC3.34□□□□□ -1.87
SMOQ99835 AC005046.1-201ENST00000608515 625 ntBASIC3.34□□□□□ -1.87
SMOQ99835 AC006157.1-201ENST00000611750 366 ntBASIC3.34□□□□□ -1.87
SMOQ99835 AC004852.3-201ENST00000614131 326 ntBASIC3.34□□□□□ -1.87
SMOQ99835 AC091925.1-201ENST00000623204 462 ntBASIC3.34□□□□□ -1.87
SMOQ99835 AC091903.1-201ENST00000624322 454 ntBASIC3.34□□□□□ -1.87
SMOQ99835 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.34□□□□□ -1.87
SMOQ99835 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SMOQ99835 SRP72P2-201ENST00000344851 1979 ntBASIC3.34□□□□□ -1.88
SMOQ99835 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.34□□□□□ -1.88
SMOQ99835 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.34□□□□□ -1.88
SMOQ99835 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SMOQ99835 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.33□□□□□ -1.88
SMOQ99835 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SMOQ99835 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.33□□□□□ -1.88
SMOQ99835 ZNF826P-207ENST00000622273 1910 ntBASIC3.33□□□□□ -1.88
SMOQ99835 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SMOQ99835 RNU6-1032P-201ENST00000384100 107 ntBASIC3.33□□□□□ -1.88
SMOQ99835 MIR521-1-201ENST00000384902 87 ntBASIC3.33□□□□□ -1.88
SMOQ99835 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.33□□□□□ -1.88
SMOQ99835 AL353997.1-201ENST00000432936 108 ntBASIC3.33□□□□□ -1.88
SMOQ99835 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.33□□□□□ -1.88
SMOQ99835 AC133134.1-201ENST00000466800 359 ntBASIC3.33□□□□□ -1.88
SMOQ99835 AC068781.1-201ENST00000488231 618 ntBASIC3.33□□□□□ -1.88
SMOQ99835 SNORA74D-201ENST00000516404 141 ntBASIC3.33□□□□□ -1.88
SMOQ99835 RNU6-1046P-201ENST00000516538 107 ntBASIC3.33□□□□□ -1.88
SMOQ99835 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.33□□□□□ -1.88
SMOQ99835 IGHV3-76-201ENST00000522465 295 ntBASIC3.33□□□□□ -1.88
SMOQ99835 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.33□□□□□ -1.88
SMOQ99835 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.33□□□□□ -1.88
SMOQ99835 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.33□□□□□ -1.88
SMOQ99835 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.33□□□□□ -1.88
SMOQ99835 AL158827.2-201ENST00000602494 330 ntBASIC3.33□□□□□ -1.88
SMOQ99835 AC018889.1-201ENST00000605372 397 ntBASIC3.33□□□□□ -1.88
SMOQ99835 AC005014.2-201ENST00000607795 599 ntBASIC3.33□□□□□ -1.88
SMOQ99835 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SMOQ99835 SCARNA4-202ENST00000625402 129 ntBASIC3.33□□□□□ -1.88
SMOQ99835 AL691447.3-201ENST00000635020 330 ntBASIC3.33□□□□□ -1.88
SMOQ99835 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SMOQ99835 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMOQ99835 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMOQ99835 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMOQ99835 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.33□□□□□ -1.88
SMOQ99835 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SMOQ99835 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.32□□□□□ -1.88
SMOQ99835 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.32□□□□□ -1.88
SMOQ99835 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.32□□□□□ -1.88
SMOQ99835 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SMOQ99835 RNU6-942P-201ENST00000363002 107 ntBASIC3.32□□□□□ -1.88
SMOQ99835 U3.6-201ENST00000363622 211 ntBASIC3.32□□□□□ -1.88
SMOQ99835 MTND3P9-201ENST00000429526 346 ntBASIC3.32□□□□□ -1.88
SMOQ99835 BTF3P15-201ENST00000455606 336 ntBASIC3.32□□□□□ -1.88
SMOQ99835 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.32□□□□□ -1.88
SMOQ99835 SNORA59A-201ENST00000459326 152 ntBASIC3.32□□□□□ -1.88
SMOQ99835 U8.21-201ENST00000459536 136 ntBASIC3.32□□□□□ -1.88
SMOQ99835 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.32□□□□□ -1.88
SMOQ99835 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.32□□□□□ -1.88
SMOQ99835 RNU6-612P-201ENST00000516909 102 ntBASIC3.32□□□□□ -1.88
SMOQ99835 RNU6-264P-201ENST00000517134 104 ntBASIC3.32□□□□□ -1.88
SMOQ99835 AP005902.1-201ENST00000521358 186 ntBASIC3.32□□□□□ -1.88
SMOQ99835 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.32□□□□□ -1.88
SMOQ99835 AL391261.3-201ENST00000557194 520 ntBASIC3.32□□□□□ -1.88
SMOQ99835 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.32□□□□□ -1.88
SMOQ99835 MIR4680-201ENST00000580906 66 ntBASIC3.32□□□□□ -1.88
SMOQ99835 MIR4273-201ENST00000582824 84 ntBASIC3.32□□□□□ -1.88
SMOQ99835 AC136443.5-201ENST00000603741 370 ntBASIC3.32□□□□□ -1.88
SMOQ99835 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.32□□□□□ -1.88
SMOQ99835 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.32□□□□□ -1.88
SMOQ99835 AC073476.4-201ENST00000628409 72 ntBASIC3.32□□□□□ -1.88
SMOQ99835 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.32□□□□□ -1.88
SMOQ99835 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.32□□□□□ -1.88
SMOQ99835 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SMOQ99835 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SMOQ99835 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SMOQ99835 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
SMOQ99835 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
SMOQ99835 Y_RNA.533-201ENST00000384596 114 ntBASIC3.31□□□□□ -1.88
SMOQ99835 SNORA1.3-201ENST00000384676 136 ntBASIC3.31□□□□□ -1.88
SMOQ99835 MIR634-201ENST00000385208 97 ntBASIC3.31□□□□□ -1.88
SMOQ99835 MRPL42P3-201ENST00000401492 326 ntBASIC3.31□□□□□ -1.88
SMOQ99835 RPS29P13-201ENST00000402041 169 ntBASIC3.31□□□□□ -1.88
SMOQ99835 NDUFS5P4-201ENST00000412983 318 ntBASIC3.31□□□□□ -1.88
SMOQ99835 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.31□□□□□ -1.88
SMOQ99835 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms