Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.85□□□□□ -2.11
SCN2AQ99250 AC009414.1-201ENST00000427200 443 ntBASIC1.85□□□□□ -2.11
SCN2AQ99250 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.85□□□□□ -2.11
SCN2AQ99250 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.85□□□□□ -2.11
SCN2AQ99250 RNU6-261P-201ENST00000459506 102 ntBASIC1.85□□□□□ -2.11
SCN2AQ99250 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.85□□□□□ -2.11
SCN2AQ99250 MRPL42P6-201ENST00000486397 371 ntBASIC1.85□□□□□ -2.11
SCN2AQ99250 MTND2P33-201ENST00000506452 1031 ntBASIC1.85□□□□□ -2.11
SCN2AQ99250 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.85□□□□□ -2.11
SCN2AQ99250 COX6CP5-201ENST00000527162 228 ntBASIC1.85□□□□□ -2.11
SCN2AQ99250 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.85□□□□□ -2.11
SCN2AQ99250 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN2AQ99250 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.85□□□□□ -2.11
SCN2AQ99250 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.85□□□□□ -2.11
SCN2AQ99250 NUTF2P8-201ENST00000604593 363 ntBASIC1.85□□□□□ -2.11
SCN2AQ99250 AP001596.2-201ENST00000608410 312 ntBASIC1.85□□□□□ -2.11
SCN2AQ99250 AC015540.1-201ENST00000615828 501 ntBASIC1.85□□□□□ -2.11
SCN2AQ99250 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.85□□□□□ -2.11
SCN2AQ99250 MIR6132-201ENST00000622083 109 ntBASIC1.85□□□□□ -2.11
SCN2AQ99250 MIR203B-201ENST00000636080 86 ntBASIC1.85□□□□□ -2.11
SCN2AQ99250 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SCN2AQ99250 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.85□□□□□ -2.11
SCN2AQ99250 Y_RNA.517-201ENST00000384551 106 ntBASIC1.84□□□□□ -2.11
SCN2AQ99250 RNU6-750P-201ENST00000390946 107 ntBASIC1.84□□□□□ -2.11
SCN2AQ99250 AL353621.1-201ENST00000418219 243 ntBASIC1.84□□□□□ -2.11
SCN2AQ99250 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.84□□□□□ -2.11
SCN2AQ99250 AL360271.2-201ENST00000447710 161 ntBASIC1.84□□□□□ -2.11
SCN2AQ99250 AC022364.2-201ENST00000457963 554 ntBASIC1.84□□□□□ -2.11
SCN2AQ99250 RPL23AP70-201ENST00000483361 460 ntBASIC1.84□□□□□ -2.11
SCN2AQ99250 AC079804.2-201ENST00000490376 200 ntBASIC1.84□□□□□ -2.11
SCN2AQ99250 AC116562.3-201ENST00000506136 177 ntBASIC1.84□□□□□ -2.11
SCN2AQ99250 BTF3P12-201ENST00000519620 469 ntBASIC1.84□□□□□ -2.11
SCN2AQ99250 AC068587.5-201ENST00000528506 175 ntBASIC1.84□□□□□ -2.11
SCN2AQ99250 ARL2BPP2-201ENST00000550907 489 ntBASIC1.84□□□□□ -2.11
SCN2AQ99250 RPS3AP23-202ENST00000574601 686 ntBASIC1.84□□□□□ -2.11
SCN2AQ99250 APOOP1-201ENST00000604695 592 ntBASIC1.84□□□□□ -2.11
SCN2AQ99250 Y_RNA.33-201ENST00000362591 102 ntBASIC1.84□□□□□ -2.12
SCN2AQ99250 RNA5SP99-201ENST00000364020 114 ntBASIC1.84□□□□□ -2.12
SCN2AQ99250 Y_RNA.436-201ENST00000384097 102 ntBASIC1.84□□□□□ -2.12
SCN2AQ99250 RNU6-434P-201ENST00000384376 107 ntBASIC1.84□□□□□ -2.12
SCN2AQ99250 RNU6-348P-201ENST00000384386 107 ntBASIC1.84□□□□□ -2.12
SCN2AQ99250 SNORA51.11-201ENST00000384442 131 ntBASIC1.84□□□□□ -2.12
SCN2AQ99250 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
SCN2AQ99250 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
SCN2AQ99250 RNU6-293P-201ENST00000411259 106 ntBASIC1.84□□□□□ -2.12
SCN2AQ99250 RPS12P24-201ENST00000412619 387 ntBASIC1.84□□□□□ -2.12
SCN2AQ99250 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.84□□□□□ -2.12
SCN2AQ99250 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.84□□□□□ -2.12
SCN2AQ99250 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.84□□□□□ -2.12
SCN2AQ99250 RPL12P25-201ENST00000455592 494 ntBASIC1.84□□□□□ -2.12
SCN2AQ99250 AL441985.1-201ENST00000457727 251 ntBASIC1.84□□□□□ -2.12
SCN2AQ99250 RPL23AP42-201ENST00000471152 471 ntBASIC1.84□□□□□ -2.12
SCN2AQ99250 AC117503.1-201ENST00000472241 394 ntBASIC1.84□□□□□ -2.12
SCN2AQ99250 RPL7P43-201ENST00000478876 753 ntBASIC1.84□□□□□ -2.12
SCN2AQ99250 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.84□□□□□ -2.12
SCN2AQ99250 SMURF2P1-201ENST00000514992 481 ntBASIC1.84□□□□□ -2.12
SCN2AQ99250 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.84□□□□□ -2.12
SCN2AQ99250 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.84□□□□□ -2.12
SCN2AQ99250 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.84□□□□□ -2.12
SCN2AQ99250 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.84□□□□□ -2.12
SCN2AQ99250 AC025449.1-201ENST00000603896 529 ntBASIC1.84□□□□□ -2.12
SCN2AQ99250 AL121992.2-201ENST00000606262 256 ntBASIC1.84□□□□□ -2.12
SCN2AQ99250 AC093788.1-201ENST00000609356 927 ntBASIC1.84□□□□□ -2.12
SCN2AQ99250 RMST_4.1-201ENST00000616886 107 ntBASIC1.84□□□□□ -2.12
SCN2AQ99250 AC048344.4-201ENST00000619744 527 ntBASIC1.84□□□□□ -2.12
SCN2AQ99250 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.84□□□□□ -2.12
SCN2AQ99250 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
SCN2AQ99250 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.84□□□□□ -2.12
SCN2AQ99250 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.84□□□□□ -2.12
SCN2AQ99250 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.83□□□□□ -2.12
SCN2AQ99250 RNU6-371P-201ENST00000364283 108 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 RNU4-52P-201ENST00000384209 138 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 RNU6-1106P-201ENST00000390845 107 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 DEFB108C-201ENST00000400154 252 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 RNU2-49P-201ENST00000410666 184 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.83□□□□□ -2.12
SCN2AQ99250 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.83□□□□□ -2.12
SCN2AQ99250 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.83□□□□□ -2.12
SCN2AQ99250 MTCO2P7-201ENST00000446518 666 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 RNU7-26P-201ENST00000458980 63 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 SCARNA24.1-201ENST00000516465 137 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 SNORA25.17-201ENST00000517184 124 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 SUB1P2-201ENST00000556401 297 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.83□□□□□ -2.12
SCN2AQ99250 MIR5694-201ENST00000581190 76 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 AC103987.3-201ENST00000582071 292 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 MIR7515-201ENST00000637837 67 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 AC068137.3-201ENST00000639191 341 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 AC010329.5-201ENST00000623497 2174 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.83□□□□□ -2.12
SCN2AQ99250 Y_RNA.318-201ENST00000365131 97 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 SNORA75-201ENST00000384158 137 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 RNU6-622P-201ENST00000384272 103 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 RNU2-23P-201ENST00000410545 195 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 AC138623.1-201ENST00000418060 216 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.83□□□□□ -2.12
SCN2AQ99250 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.83□□□□□ -2.12
SCN2AQ99250 HMGB1P31-201ENST00000437242 427 ntBASIC1.83□□□□□ -2.12
SCN2AQ99250 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms