Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 MIR515-1-201ENST00000384884 83 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.45□□□□□ -2.34
TTC28Q96AY4 MTND2P5-201ENST00000432656 1006 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 AC092427.1-201ENST00000439177 601 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 RPL39P29-201ENST00000447779 157 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
TTC28Q96AY4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.45□□□□□ -2.34
TTC28Q96AY4 MTND2P6-201ENST00000455337 1030 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.45□□□□□ -2.34
TTC28Q96AY4 AC006026.2-201ENST00000457376 180 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 AC025465.4-201ENST00000513422 638 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.45□□□□□ -2.34
TTC28Q96AY4 AL158211.4-201ENST00000606988 584 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 AL357075.2-201ENST00000614906 189 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 RMST_10.1-201ENST00000616309 154 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 AC008443.7-201ENST00000622195 246 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 AP003476.1-201ENST00000623984 516 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 MTND1P37-201ENST00000636562 264 ntBASIC0.45□□□□□ -2.34
TTC28Q96AY4 RNU6-271P-201ENST00000363858 105 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 AC127391.1-201ENST00000411737 98 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 AC006461.1-201ENST00000412637 326 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.44□□□□□ -2.34
TTC28Q96AY4 RPL22P18-201ENST00000417197 377 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 MTND4P24-201ENST00000424002 397 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.44□□□□□ -2.34
TTC28Q96AY4 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 AC114811.1-201ENST00000507207 168 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.44□□□□□ -2.34
TTC28Q96AY4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.44□□□□□ -2.34
TTC28Q96AY4 SNORA76.2-201ENST00000517095 137 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.44□□□□□ -2.34
TTC28Q96AY4 ELOCP32-201ENST00000548625 324 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.44□□□□□ -2.34
TTC28Q96AY4 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.44□□□□□ -2.34
TTC28Q96AY4 MIR3129-201ENST00000581095 76 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 MIR4441-201ENST00000582623 100 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 CLIC4P2-201ENST00000601934 717 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 AL390208.1-201ENST00000605885 644 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 AL118556.2-201ENST00000614375 824 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 MIR8074-201ENST00000615081 81 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 AL078604.3-201ENST00000615580 211 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 Z99571.1-201ENST00000636677 394 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
TTC28Q96AY4 Y_RNA.67-201ENST00000362870 100 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 Y_RNA.203-201ENST00000364106 102 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 RNU6-338P-201ENST00000383888 105 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 RNU1-39P-201ENST00000383897 165 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 SNORA22-201ENST00000383907 134 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 RNU6-637P-201ENST00000384050 107 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 SNORA22C-201ENST00000384614 134 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 MIR92A1-201ENST00000385233 78 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
TTC28Q96AY4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
TTC28Q96AY4 ZNF736P10Y-201ENST00000403990 1110 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 MIR1283-2-201ENST00000408621 87 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 RPL26P27-201ENST00000414397 437 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 TAF13P2-201ENST00000416876 286 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 RPL39P6-201ENST00000448289 150 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 MTCYBP16-201ENST00000509187 1129 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
TTC28Q96AY4 RNA5SP290-201ENST00000517133 127 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 RN7SKP258-201ENST00000517151 304 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 MRPS36P4-201ENST00000534436 298 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.44□□□□□ -2.34
TTC28Q96AY4 MIR4713-201ENST00000582691 75 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 Z83818.1-201ENST00000603584 150 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 AL357094.1-201ENST00000603845 844 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 AC010900.2-201ENST00000604508 210 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 AL022345.1-201ENST00000607292 135 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 AL596245.1-201ENST00000618994 362 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 AC084824.4-201ENST00000620106 731 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 MTND5P32-201ENST00000560711 1802 ntBASIC0.44□□□□□ -2.34
TTC28Q96AY4 RNU1-96P-201ENST00000364163 162 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 RNU6-1297P-201ENST00000384415 104 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 RNA5SP222-201ENST00000411039 105 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
TTC28Q96AY4 RPL23AP95-201ENST00000426806 265 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.43□□□□□ -2.34
TTC28Q96AY4 TPTE2P1-204ENST00000435256 593 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 ARPC3P5-201ENST00000448802 534 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.43□□□□□ -2.34
TTC28Q96AY4 OR2A41P-201ENST00000473586 105 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 AC139453.3-201ENST00000493276 369 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 SNORA25.11-201ENST00000515935 105 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 RNU6-322P-201ENST00000516010 103 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.43□□□□□ -2.34
TTC28Q96AY4 MIR5190-201ENST00000581537 80 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.43□□□□□ -2.34
TTC28Q96AY4 AC091152.3-201ENST00000604227 325 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 PRR13P7-201ENST00000605538 430 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.43□□□□□ -2.34
TTC28Q96AY4 AC092953.2-201ENST00000608000 699 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.43□□□□□ -2.34
TTC28Q96AY4 AC092192.1-201ENST00000633154 1018 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 MIR4275-201ENST00000636486 87 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 AC092125.1-201ENST00000562568 1995 ntBASIC0.43□□□□□ -2.34
TTC28Q96AY4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms