Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 IGLV3-26-201ENST00000520756 302 ntBASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 AC027288.2-201ENST00000553028 243 ntBASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 ZNF826P-207ENST00000622273 1910 ntBASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VTI1AQ96AJ9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 Y_RNA.199-201ENST00000364014 102 ntBASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 SNORD46.1-201ENST00000364139 104 ntBASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 RNU1-100P-201ENST00000365255 165 ntBASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 MIR487A-201ENST00000385009 80 ntBASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 SNORD12B-201ENST00000410433 91 ntBASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 RN7SKP53-201ENST00000411337 315 ntBASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 RPL23AP95-201ENST00000426806 265 ntBASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 HLA-N-201ENST00000437516 135 ntBASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 AC026784.1-201ENST00000507986 352 ntBASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 AC012468.1-201ENST00000604888 430 ntBASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 MIR6134-201ENST00000617606 109 ntBASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 AC011266.1-201ENST00000624119 3569 ntBASIC4.68□□□□□ -1.66
VTI1AQ96AJ9 AL136164.4-201ENST00000625013 2135 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 AL079305.1-201ENST00000623159 3008 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 MIR411-201ENST00000362239 96 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 MIR208A-201ENST00000362287 71 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 SNORD56.1-201ENST00000362913 68 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 RNU5B-2P-201ENST00000363036 113 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 RNU6-884P-201ENST00000363889 107 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 RNU1-140P-201ENST00000365040 165 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 U8.10-201ENST00000384260 133 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 MIR1183-201ENST00000408856 89 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 RNU4-30P-201ENST00000410245 143 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 HMGN2P30-201ENST00000423237 256 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 YME1L1P1-201ENST00000429435 297 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 AC007969.2-201ENST00000441891 191 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 AC096638.1-201ENST00000444678 216 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 AL392103.1-201ENST00000447000 198 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 RPL26P26-201ENST00000480251 434 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 AC025445.1-201ENST00000502728 300 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 AC107393.1-201ENST00000512403 346 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 AC022655.2-201ENST00000577280 318 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 MIR432-201ENST00000606207 94 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 MIR7702-201ENST00000621931 59 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 AC039056.2-201ENST00000622261 511 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 SRP72P2-201ENST00000344851 1979 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 AF127577.6-201ENST00000623352 2191 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 AL353743.1-202ENST00000431724 1695 ntBASIC4.67□□□□□ -1.66
VTI1AQ96AJ9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VTI1AQ96AJ9 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
VTI1AQ96AJ9 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.66□□□□□ -1.66
VTI1AQ96AJ9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.66□□□□□ -1.66
VTI1AQ96AJ9 Y_RNA.44-201ENST00000362676 108 ntBASIC4.66□□□□□ -1.66
VTI1AQ96AJ9 Y_RNA.504-201ENST00000384481 104 ntBASIC4.66□□□□□ -1.66
VTI1AQ96AJ9 SNORD66.1-201ENST00000391230 76 ntBASIC4.66□□□□□ -1.66
VTI1AQ96AJ9 AP000567.1-201ENST00000406413 156 ntBASIC4.66□□□□□ -1.66
VTI1AQ96AJ9 RNU6-1245P-201ENST00000411130 106 ntBASIC4.66□□□□□ -1.66
VTI1AQ96AJ9 AL691449.1-201ENST00000426570 421 ntBASIC4.66□□□□□ -1.66
VTI1AQ96AJ9 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.66□□□□□ -1.66
VTI1AQ96AJ9 AL133547.1-201ENST00000448546 220 ntBASIC4.66□□□□□ -1.66
VTI1AQ96AJ9 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.66□□□□□ -1.66
VTI1AQ96AJ9 RPL7P49-201ENST00000471402 708 ntBASIC4.66□□□□□ -1.66
VTI1AQ96AJ9 RNU6-255P-201ENST00000516957 105 ntBASIC4.66□□□□□ -1.66
VTI1AQ96AJ9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.66□□□□□ -1.66
VTI1AQ96AJ9 AC006064.5-201ENST00000541782 248 ntBASIC4.66□□□□□ -1.66
VTI1AQ96AJ9 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.66□□□□□ -1.66
VTI1AQ96AJ9 AC024581.2-201ENST00000619986 252 ntBASIC4.66□□□□□ -1.66
VTI1AQ96AJ9 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.66□□□□□ -1.66
VTI1AQ96AJ9 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
VTI1AQ96AJ9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
VTI1AQ96AJ9 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VTI1AQ96AJ9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.65□□□□□ -1.66
VTI1AQ96AJ9 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
VTI1AQ96AJ9 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.65□□□□□ -1.66
VTI1AQ96AJ9 HAUS6P2-201ENST00000433254 2404 ntBASIC4.65□□□□□ -1.66
VTI1AQ96AJ9 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms