Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 OR6C66P-201ENST00000414917 930 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 VN1R36P-201ENST00000414936 291 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 RPL36AP6-201ENST00000435770 321 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.79□□□□□ -1.96
SNED1Q8TER0 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.79□□□□□ -1.96
SNED1Q8TER0 AC083904.1-201ENST00000487828 231 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 MTCO1P29-201ENST00000496868 288 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 RNA5SP458-201ENST00000516188 119 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 RNU6-1038P-201ENST00000516516 104 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 RNU7-51P-201ENST00000516560 62 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 SNORA25.17-201ENST00000517184 124 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SNED1Q8TER0 AP005435.4-201ENST00000529514 284 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.79□□□□□ -1.96
SNED1Q8TER0 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SNED1Q8TER0 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SNED1Q8TER0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.79□□□□□ -1.96
SNED1Q8TER0 AL080274.1-201ENST00000605565 220 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 U2.15-201ENST00000611544 191 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 U2.16-201ENST00000613119 191 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 U2.12-201ENST00000613778 191 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 U2.20-201ENST00000613956 192 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 U2.9-201ENST00000615427 191 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 U2.11-201ENST00000616345 191 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 U2.2-201ENST00000616535 191 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 U2.3-201ENST00000617785 191 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 U2.19-201ENST00000618602 191 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 RNU2-1-201ENST00000618664 191 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 U2.6-201ENST00000619225 191 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 U2.5-201ENST00000619465 191 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 U2.10-201ENST00000620268 191 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.79□□□□□ -1.96
SNED1Q8TER0 AL138713.1-201ENST00000624026 2130 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 U6.114-201ENST00000636407 96 ntBASIC2.79□□□□□ -1.96
SNED1Q8TER0 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SNED1Q8TER0 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SNED1Q8TER0 AL356292.1-201ENST00000283110 373 ntBASIC2.78□□□□□ -1.96
SNED1Q8TER0 DEFB108F-201ENST00000344638 222 ntBASIC2.78□□□□□ -1.96
SNED1Q8TER0 Y_RNA.164-201ENST00000363709 102 ntBASIC2.78□□□□□ -1.96
SNED1Q8TER0 SNORA33.2-201ENST00000365413 134 ntBASIC2.78□□□□□ -1.96
SNED1Q8TER0 Y_RNA.445-201ENST00000384168 102 ntBASIC2.78□□□□□ -1.96
SNED1Q8TER0 Y_RNA.459-201ENST00000384251 102 ntBASIC2.78□□□□□ -1.96
SNED1Q8TER0 Y_RNA.530-201ENST00000384587 101 ntBASIC2.78□□□□□ -1.96
SNED1Q8TER0 AL359634.1-202ENST00000404721 284 ntBASIC2.78□□□□□ -1.96
SNED1Q8TER0 RNU6-1304P-201ENST00000411374 106 ntBASIC2.78□□□□□ -1.96
SNED1Q8TER0 ARL5AP1-201ENST00000418991 388 ntBASIC2.78□□□□□ -1.96
SNED1Q8TER0 RPL7P46-201ENST00000425129 740 ntBASIC2.78□□□□□ -1.96
SNED1Q8TER0 EZH2P1-201ENST00000431167 291 ntBASIC2.78□□□□□ -1.96
SNED1Q8TER0 AC092798.1-201ENST00000458542 409 ntBASIC2.78□□□□□ -1.96
SNED1Q8TER0 SNORD121B-201ENST00000458838 81 ntBASIC2.78□□□□□ -1.96
SNED1Q8TER0 Y_RNA.639-201ENST00000458981 102 ntBASIC2.78□□□□□ -1.96
SNED1Q8TER0 RNU7-59P-201ENST00000459101 61 ntBASIC2.78□□□□□ -1.96
SNED1Q8TER0 RPS27P27-201ENST00000498779 255 ntBASIC2.78□□□□□ -1.96
SNED1Q8TER0 AC005741.1-201ENST00000511094 432 ntBASIC2.78□□□□□ -1.96
SNED1Q8TER0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.78□□□□□ -1.96
SNED1Q8TER0 RNA5SP503-201ENST00000517047 117 ntBASIC2.78□□□□□ -1.96
SNED1Q8TER0 MTND4P7-201ENST00000523876 130 ntBASIC2.78□□□□□ -1.96
SNED1Q8TER0 DEFB108D-201ENST00000527787 222 ntBASIC2.78□□□□□ -1.96
SNED1Q8TER0 CR383656.7-201ENST00000548164 174 ntBASIC2.78□□□□□ -1.96
SNED1Q8TER0 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.78□□□□□ -1.96
SNED1Q8TER0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.78□□□□□ -1.96
SNED1Q8TER0 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.78□□□□□ -1.96
SNED1Q8TER0 APOOP1-201ENST00000604695 592 ntBASIC2.78□□□□□ -1.96
SNED1Q8TER0 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.78□□□□□ -1.96
SNED1Q8TER0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SNED1Q8TER0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.78□□□□□ -1.96
SNED1Q8TER0 AC009487.4-201ENST00000624969 3585 ntBASIC2.78□□□□□ -1.97
SNED1Q8TER0 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.78□□□□□ -1.97
SNED1Q8TER0 AC091564.4-201ENST00000533934 2194 ntBASIC2.77□□□□□ -1.97
SNED1Q8TER0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.77□□□□□ -1.97
SNED1Q8TER0 Y_RNA.145-201ENST00000363527 102 ntBASIC2.77□□□□□ -1.97
SNED1Q8TER0 Y_RNA.414-201ENST00000384011 101 ntBASIC2.77□□□□□ -1.97
SNED1Q8TER0 SNORD116-29-201ENST00000384516 83 ntBASIC2.77□□□□□ -1.97
SNED1Q8TER0 MIR493-201ENST00000385254 89 ntBASIC2.77□□□□□ -1.97
SNED1Q8TER0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SNED1Q8TER0 MTCYBP4-201ENST00000401524 249 ntBASIC2.77□□□□□ -1.97
SNED1Q8TER0 MIR1290-201ENST00000408735 78 ntBASIC2.77□□□□□ -1.97
SNED1Q8TER0 RNU4-14P-201ENST00000410858 122 ntBASIC2.77□□□□□ -1.97
SNED1Q8TER0 Z82205.1-201ENST00000428456 297 ntBASIC2.77□□□□□ -1.97
SNED1Q8TER0 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.77□□□□□ -1.97
SNED1Q8TER0 MTND3P2-201ENST00000438452 342 ntBASIC2.77□□□□□ -1.97
SNED1Q8TER0 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.77□□□□□ -1.97
SNED1Q8TER0 PRPS1P1-201ENST00000445305 876 ntBASIC2.77□□□□□ -1.97
SNED1Q8TER0 AL118520.1-201ENST00000450770 291 ntBASIC2.77□□□□□ -1.97
SNED1Q8TER0 MTND1P9-201ENST00000453775 944 ntBASIC2.77□□□□□ -1.97
SNED1Q8TER0 SNRPFP3-201ENST00000457792 225 ntBASIC2.77□□□□□ -1.97
SNED1Q8TER0 Y_RNA.635-201ENST00000459041 101 ntBASIC2.77□□□□□ -1.97
SNED1Q8TER0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.77□□□□□ -1.97
SNED1Q8TER0 RNU6-798P-201ENST00000516912 103 ntBASIC2.77□□□□□ -1.97
SNED1Q8TER0 RNU6-273P-201ENST00000516937 96 ntBASIC2.77□□□□□ -1.97
SNED1Q8TER0 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.77□□□□□ -1.97
SNED1Q8TER0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.77□□□□□ -1.97
SNED1Q8TER0 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.77□□□□□ -1.97
SNED1Q8TER0 MIR3921-201ENST00000577308 85 ntBASIC2.77□□□□□ -1.97
SNED1Q8TER0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.77□□□□□ -1.97
SNED1Q8TER0 AC016925.2-201ENST00000605108 242 ntBASIC2.77□□□□□ -1.97
SNED1Q8TER0 AL627309.6-201ENST00000606857 840 ntBASIC2.77□□□□□ -1.97
SNED1Q8TER0 MIR6766-201ENST00000622641 72 ntBASIC2.77□□□□□ -1.97
SNED1Q8TER0 AL136313.1-201ENST00000624804 202 ntBASIC2.77□□□□□ -1.97
SNED1Q8TER0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms