Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 Y_RNA.71-201ENST00000362892 104 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 Y_RNA.75-201ENST00000362927 97 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 Y_RNA.238-201ENST00000364441 102 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 RNU6-741P-201ENST00000383889 107 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 SNORD116-14-201ENST00000383894 92 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 SNORD116-17-201ENST00000383929 92 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 SNORD116-15-201ENST00000384445 92 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 SNORD116-20-201ENST00000384529 92 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 SNORD116-19-201ENST00000384729 92 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 MIR30B-201ENST00000384850 88 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 MIR34A-201ENST00000385130 110 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 MIR153-2-201ENST00000385225 87 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 SNORA40C-201ENST00000391285 128 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 AL137159.1-201ENST00000452808 512 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 AC091179.1-201ENST00000461606 579 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 RPS27AP9-201ENST00000477681 438 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 RPL23AP49-201ENST00000492925 468 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 RNU6-971P-201ENST00000516920 106 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 AC112693.2-201ENST00000556538 232 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 TGIF1P1-201ENST00000558095 802 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 AC055872.1-201ENST00000570978 278 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 MIR548X2-201ENST00000579776 100 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 MIR4512-201ENST00000583257 77 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 snoU18.1-201ENST00000629629 71 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 AC007390.2-201ENST00000606229 3803 ntBASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHKBP1Q8TBC3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 AL356489.2-201ENST00000566968 3528 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 RNU6-1286P-201ENST00000383871 107 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 RNU6-166P-201ENST00000384371 107 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 MIR200C-201ENST00000384980 68 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 RNU2-2P-201ENST00000410396 191 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 RAB9AP3-201ENST00000412737 573 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 WARS2P1-201ENST00000429678 537 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 AL590399.6-201ENST00000446396 307 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 PTMAP3-201ENST00000447474 330 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 RAB9AP1-201ENST00000449393 573 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 AF186996.7-201ENST00000492781 209 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 RN7SL323P-201ENST00000494712 295 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 AC025445.1-201ENST00000502728 300 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 AC097462.2-201ENST00000504623 481 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 RNA5SP179-201ENST00000517284 121 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 YPEL5P3-201ENST00000547227 352 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 AC024220.1-201ENST00000603675 484 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 AC091167.4-201ENST00000605079 184 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 RNU2-4P-201ENST00000606190 192 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 U2.15-201ENST00000611544 191 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 U2.16-201ENST00000613119 191 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 U2.12-201ENST00000613778 191 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 U2.9-201ENST00000615427 191 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 AC005296.1-201ENST00000616145 209 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 U2.11-201ENST00000616345 191 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 U2.2-201ENST00000616535 191 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 AC131238.1-201ENST00000617135 328 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 U2.3-201ENST00000617785 191 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 U2.19-201ENST00000618602 191 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 RNU2-1-201ENST00000618664 191 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 U2.6-201ENST00000619225 191 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 U2.5-201ENST00000619465 191 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 U2.10-201ENST00000620268 191 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 MIR7702-201ENST00000621931 59 ntBASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.17□□□□□ -1.74
SHKBP1Q8TBC3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SHKBP1Q8TBC3 Y_RNA.43-201ENST00000362670 111 ntBASIC4.16□□□□□ -1.74
SHKBP1Q8TBC3 RNU6-78P-201ENST00000362897 107 ntBASIC4.16□□□□□ -1.74
SHKBP1Q8TBC3 SNORA73.2-201ENST00000364946 201 ntBASIC4.16□□□□□ -1.74
SHKBP1Q8TBC3 RNU6-281P-201ENST00000384212 103 ntBASIC4.16□□□□□ -1.74
SHKBP1Q8TBC3 RNU6-146P-201ENST00000384602 108 ntBASIC4.16□□□□□ -1.74
SHKBP1Q8TBC3 RN7SKP156-201ENST00000410308 342 ntBASIC4.16□□□□□ -1.74
SHKBP1Q8TBC3 RNU2-52P-201ENST00000410680 190 ntBASIC4.16□□□□□ -1.74
SHKBP1Q8TBC3 RNU6-1001P-201ENST00000411265 100 ntBASIC4.16□□□□□ -1.74
SHKBP1Q8TBC3 MTND4LP9-201ENST00000427694 174 ntBASIC4.16□□□□□ -1.74
SHKBP1Q8TBC3 AL512844.2-201ENST00000433990 593 ntBASIC4.16□□□□□ -1.74
SHKBP1Q8TBC3 snoU13.22-201ENST00000459428 104 ntBASIC4.16□□□□□ -1.74
SHKBP1Q8TBC3 AL049874.1-201ENST00000489560 388 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms