Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC108059.3-201ENST00000456388 214 ntBASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 snoU13.27-201ENST00000459278 104 ntBASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 AC108043.1-201ENST00000512696 574 ntBASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 SNORA31.2-201ENST00000516019 134 ntBASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 SNORD79.1-201ENST00000516069 84 ntBASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 AP001189.2-201ENST00000527320 189 ntBASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 AC087897.1-201ENST00000550134 156 ntBASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 AC025423.5-201ENST00000550230 219 ntBASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 CYP4A27P-201ENST00000567218 190 ntBASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 MIR5087-201ENST00000635826 76 ntBASIC0.22□□□□□ -2.37
SPTSSBQ8NFR3 MTND4P14-201ENST00000435799 1354 ntBASIC0.21□□□□□ -2.38
SPTSSBQ8NFR3 RNU6-942P-201ENST00000363002 107 ntBASIC0.21□□□□□ -2.38
SPTSSBQ8NFR3 RNU6-1019P-201ENST00000364424 107 ntBASIC0.21□□□□□ -2.38
SPTSSBQ8NFR3 SNORA18.2-201ENST00000383865 132 ntBASIC0.21□□□□□ -2.38
SPTSSBQ8NFR3 RNU6-945P-201ENST00000383947 107 ntBASIC0.21□□□□□ -2.38
SPTSSBQ8NFR3 RNU6-166P-201ENST00000384371 107 ntBASIC0.21□□□□□ -2.38
SPTSSBQ8NFR3 RPL21P24-201ENST00000413752 448 ntBASIC0.21□□□□□ -2.38
SPTSSBQ8NFR3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.21□□□□□ -2.38
SPTSSBQ8NFR3 AP1B1P2-201ENST00000416196 106 ntBASIC0.21□□□□□ -2.38
SPTSSBQ8NFR3 TXNL1P1-201ENST00000429528 554 ntBASIC0.21□□□□□ -2.38
SPTSSBQ8NFR3 NEFMP1-201ENST00000443423 1006 ntBASIC0.21□□□□□ -2.38
SPTSSBQ8NFR3 AL606517.1-201ENST00000446914 387 ntBASIC0.21□□□□□ -2.38
SPTSSBQ8NFR3 RPF2P2-201ENST00000504693 896 ntBASIC0.21□□□□□ -2.38
SPTSSBQ8NFR3 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.21□□□□□ -2.38
SPTSSBQ8NFR3 AC091163.3-201ENST00000518269 1144 ntBASIC0.21□□□□□ -2.38
SPTSSBQ8NFR3 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.21□□□□□ -2.38
SPTSSBQ8NFR3 AL442163.3-201ENST00000554110 156 ntBASIC0.21□□□□□ -2.38
SPTSSBQ8NFR3 AC243773.3-201ENST00000613270 256 ntBASIC0.21□□□□□ -2.38
SPTSSBQ8NFR3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.21□□□□□ -2.38
SPTSSBQ8NFR3 RMST_4.1-201ENST00000616886 107 ntBASIC0.21□□□□□ -2.38
SPTSSBQ8NFR3 AL356094.1-201ENST00000624663 1212 ntBASIC0.21□□□□□ -2.38
SPTSSBQ8NFR3 MIR208A-201ENST00000362287 71 ntBASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 snoU2_19.1-201ENST00000362361 80 ntBASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 RNU6-17P-201ENST00000384245 107 ntBASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 RNU6-18P-201ENST00000384527 107 ntBASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 RNU6-952P-201ENST00000391164 108 ntBASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 AC123900.1-201ENST00000420390 96 ntBASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 MTND2P20-201ENST00000440805 661 ntBASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 FTH1P25-201ENST00000447665 469 ntBASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 snoU13.30-201ENST00000458951 104 ntBASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 RPL39P38-201ENST00000467018 153 ntBASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 HMGB1P30-201ENST00000492455 606 ntBASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 AC108078.2-201ENST00000510750 236 ntBASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 RNA5SP490-201ENST00000517141 136 ntBASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 SUMO2P18-201ENST00000518873 252 ntBASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 CR383656.8-201ENST00000549046 145 ntBASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 SNRPGP1-201ENST00000553864 222 ntBASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 AL391001.1-201ENST00000602747 715 ntBASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 AP002906.1-201ENST00000603405 233 ntBASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 AL451064.1-201ENST00000607718 471 ntBASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 AL159153.1-201ENST00000619688 317 ntBASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.2□□□□□ -2.38
SPTSSBQ8NFR3 RNU6-858P-201ENST00000362436 107 ntBASIC0.19□□□□□ -2.38
SPTSSBQ8NFR3 RNU6-457P-201ENST00000363999 107 ntBASIC0.19□□□□□ -2.38
SPTSSBQ8NFR3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
SPTSSBQ8NFR3 RNU6-969P-201ENST00000383900 105 ntBASIC0.19□□□□□ -2.38
SPTSSBQ8NFR3 RNU6-331P-201ENST00000384724 107 ntBASIC0.19□□□□□ -2.38
SPTSSBQ8NFR3 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.19□□□□□ -2.38
SPTSSBQ8NFR3 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.19□□□□□ -2.38
SPTSSBQ8NFR3 GAPDHP17-201ENST00000449858 1001 ntBASIC0.19□□□□□ -2.38
SPTSSBQ8NFR3 RNU7-136P-201ENST00000458819 69 ntBASIC0.19□□□□□ -2.38
SPTSSBQ8NFR3 AC005840.1-201ENST00000498412 377 ntBASIC0.19□□□□□ -2.38
SPTSSBQ8NFR3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.19□□□□□ -2.38
SPTSSBQ8NFR3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.19□□□□□ -2.38
SPTSSBQ8NFR3 AC004812.1-201ENST00000540773 146 ntBASIC0.19□□□□□ -2.38
SPTSSBQ8NFR3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.19□□□□□ -2.38
SPTSSBQ8NFR3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC0.19□□□□□ -2.38
SPTSSBQ8NFR3 RNU6-87P-201ENST00000607561 108 ntBASIC0.19□□□□□ -2.38
SPTSSBQ8NFR3 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.19□□□□□ -2.38
SPTSSBQ8NFR3 AC093913.1-201ENST00000614178 329 ntBASIC0.19□□□□□ -2.38
SPTSSBQ8NFR3 DLEU1_1.1-201ENST00000618107 190 ntBASIC0.19□□□□□ -2.38
SPTSSBQ8NFR3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
SPTSSBQ8NFR3 RNU4-12P-201ENST00000365233 139 ntBASIC0.18□□□□□ -2.38
SPTSSBQ8NFR3 RNU6-14P-201ENST00000384630 106 ntBASIC0.18□□□□□ -2.38
SPTSSBQ8NFR3 RNU1-119P-201ENST00000391122 165 ntBASIC0.18□□□□□ -2.38
SPTSSBQ8NFR3 RAP1BP3-201ENST00000407180 549 ntBASIC0.18□□□□□ -2.38
SPTSSBQ8NFR3 RNA5SP390-201ENST00000410191 113 ntBASIC0.18□□□□□ -2.38
SPTSSBQ8NFR3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.18□□□□□ -2.38
SPTSSBQ8NFR3 AC016831.2-201ENST00000417179 352 ntBASIC0.18□□□□□ -2.38
SPTSSBQ8NFR3 RAC1P6-201ENST00000423911 575 ntBASIC0.18□□□□□ -2.38
SPTSSBQ8NFR3 AL592045.1-201ENST00000429867 352 ntBASIC0.18□□□□□ -2.38
SPTSSBQ8NFR3 AL035398.1-201ENST00000430869 322 ntBASIC0.18□□□□□ -2.38
SPTSSBQ8NFR3 LARP1BP3-201ENST00000437229 869 ntBASIC0.18□□□□□ -2.38
SPTSSBQ8NFR3 SNORA76.2-201ENST00000517095 137 ntBASIC0.18□□□□□ -2.38
SPTSSBQ8NFR3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.18□□□□□ -2.38
SPTSSBQ8NFR3 AC023632.1-201ENST00000518463 375 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms