Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 KC877982.1-201ENST00000602313 470 ntBASIC0.92□□□□□ -2.26
ZNF439Q8NDP4 AL606834.3-201ENST00000602615 496 ntBASIC0.92□□□□□ -2.26
ZNF439Q8NDP4 AC078795.2-201ENST00000602835 1252 ntBASIC0.92□□□□□ -2.26
ZNF439Q8NDP4 snoU13.31-201ENST00000607291 104 ntBASIC0.92□□□□□ -2.26
ZNF439Q8NDP4 AL355802.3-201ENST00000607571 545 ntBASIC0.92□□□□□ -2.26
ZNF439Q8NDP4 AC072039.2-201ENST00000608883 439 ntBASIC0.92□□□□□ -2.26
ZNF439Q8NDP4 AL355472.4-201ENST00000610233 626 ntBASIC0.92□□□□□ -2.26
ZNF439Q8NDP4 AL078604.3-201ENST00000615580 211 ntBASIC0.92□□□□□ -2.26
ZNF439Q8NDP4 AC022513.1-201ENST00000624512 117 ntBASIC0.92□□□□□ -2.26
ZNF439Q8NDP4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 MTND5P9-201ENST00000503854 1755 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 MIR302D-201ENST00000362275 68 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 RNA5SP327-201ENST00000362494 101 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 SNORD1A-201ENST00000364968 72 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 SMIM11P1-201ENST00000369586 178 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 RNU6-769P-201ENST00000384407 104 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 RNA5SP390-201ENST00000410191 113 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 RNU2-23P-201ENST00000410545 195 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 RNU2-62P-201ENST00000410868 191 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 AL365338.1-201ENST00000422282 858 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 AC092648.1-201ENST00000425870 423 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 AL669831.1-202ENST00000428504 417 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 LARP1BP3-201ENST00000437229 869 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 AL117351.1-201ENST00000438864 766 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 AC092473.1-201ENST00000441098 221 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 RPL30P6-201ENST00000475925 342 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 RPL30P1-201ENST00000488676 339 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 MTCYBP40-201ENST00000509390 1135 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 MTND2P31-201ENST00000512602 616 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 AL356057.1-201ENST00000533798 831 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 MIR3169-201ENST00000578032 83 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 BCRP9-201ENST00000605312 388 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 AC112220.3-201ENST00000605502 502 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 MIR6078-201ENST00000611069 100 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 PART1_2.1-201ENST00000612397 250 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 AC006386.1-201ENST00000619436 415 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 AL589994.2-201ENST00000621124 579 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 MIR1248-201ENST00000629190 106 ntBASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
ZNF439Q8NDP4 AC099786.3-201ENST00000565735 1410 ntBASIC0.9□□□□□ -2.26
ZNF439Q8NDP4 AC233981.2-201ENST00000611524 1614 ntBASIC0.9□□□□□ -2.26
ZNF439Q8NDP4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 RNU6-23P-201ENST00000363283 107 ntBASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 Y_RNA.192-201ENST00000363977 102 ntBASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 Y_RNA.465-201ENST00000384293 102 ntBASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 MIR1267-201ENST00000408723 78 ntBASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 ELOCP17-201ENST00000414751 326 ntBASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 OR6C66P-201ENST00000414917 930 ntBASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 ELOCP9-201ENST00000418624 239 ntBASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 MTND2P4-201ENST00000445034 1004 ntBASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 AL583843.1-201ENST00000456070 346 ntBASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 AC093899.1-201ENST00000457984 376 ntBASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 SNORA19.3-201ENST00000516165 130 ntBASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 RNU7-40P-201ENST00000516397 64 ntBASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 SUB1P4-201ENST00000566062 339 ntBASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 HSPE1P19-201ENST00000603327 295 ntBASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 AC123912.5-201ENST00000605470 343 ntBASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 AC130324.3-201ENST00000614165 542 ntBASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 MIR8063-201ENST00000621930 81 ntBASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.9□□□□□ -2.27
ZNF439Q8NDP4 RNY4P24-201ENST00000362735 96 ntBASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 RNU6-414P-201ENST00000363705 104 ntBASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 RNA5SP493-201ENST00000364115 91 ntBASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 SNORA62.1-201ENST00000364287 154 ntBASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 RNU6-72P-201ENST00000384285 79 ntBASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 FGF7P8-201ENST00000402994 292 ntBASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 Y_RNA.623-201ENST00000411128 95 ntBASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 RPL23AP36-201ENST00000413895 458 ntBASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 AC092809.3-201ENST00000415453 231 ntBASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 CBX3P6-201ENST00000430257 527 ntBASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 AL627311.1-201ENST00000431514 115 ntBASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 NDUFB1P2-201ENST00000449477 176 ntBASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 RPL23AP35-201ENST00000451906 501 ntBASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 AC087477.1-201ENST00000465747 340 ntBASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 RNU6-276P-201ENST00000516114 96 ntBASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 TRAV32-201ENST00000553993 340 ntBASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 MIR544B-201ENST00000582372 78 ntBASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 AL022154.1-201ENST00000604698 785 ntBASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.89□□□□□ -2.27
ZNF439Q8NDP4 AL590240.4-201ENST00000616908 390 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 224.5 ms