Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC025165.5-201ENST00000602802 578 ntBASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 AC007621.1-201ENST00000604544 437 ntBASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 AC092954.2-201ENST00000609103 430 ntBASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 AC093788.1-201ENST00000609356 927 ntBASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 AC135507.2-201ENST00000612443 309 ntBASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 AC138627.2-201ENST00000624202 601 ntBASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 ZNF720P1-201ENST00000562403 1939 ntBASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC71LQ8N9Z2 RBBP8P1-201ENST00000449447 1844 ntBASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-942P-201ENST00000363002 107 ntBASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 SNORA16B-201ENST00000364674 135 ntBASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 Y_RNA.481-201ENST00000384373 102 ntBASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-434P-201ENST00000384376 107 ntBASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 SNORA16.2-201ENST00000390991 127 ntBASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-607P-201ENST00000411283 108 ntBASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 MTCO1P21-201ENST00000416634 589 ntBASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 AC138623.1-201ENST00000418060 216 ntBASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 AC012308.1-201ENST00000451232 178 ntBASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 AC083798.1-201ENST00000472671 131 ntBASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 MED28P2-201ENST00000475771 317 ntBASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 AC019235.1-201ENST00000503847 207 ntBASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 Y_RNA.693-201ENST00000516641 110 ntBASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 AL137161.1-201ENST00000532231 390 ntBASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 AL162373.1-201ENST00000620433 407 ntBASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 AL365361.1-201ENST00000566942 3481 ntBASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 KPNA2P1-201ENST00000458289 1591 ntBASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 AC069528.2-201ENST00000624849 1991 ntBASIC1.92□□□□□ -2.1
CCDC71LQ8N9Z2 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-483P-201ENST00000384088 108 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-1032P-201ENST00000384100 107 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-301P-201ENST00000384277 107 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-1215P-201ENST00000384441 102 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 SNORA51.11-201ENST00000384442 131 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 SNORD116-20-201ENST00000384529 92 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 Y_RNA.516-201ENST00000384541 124 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 AL590002.1-201ENST00000406554 418 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 U6atac.2-201ENST00000408644 118 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 RNU2-3P-201ENST00000410144 191 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 RNA5SP270-201ENST00000411361 118 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 CYCSP33-201ENST00000414485 327 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 TIMM9P3-201ENST00000428659 274 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 C8orf59P1-201ENST00000429930 303 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 RNU7-180P-201ENST00000459240 63 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-261P-201ENST00000459506 102 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 S100A11P2-201ENST00000467589 312 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 AC104435.1-201ENST00000483483 166 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 MTAPP1-201ENST00000489154 819 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 AC026436.1-201ENST00000510537 270 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 LRRC34P2-201ENST00000514850 553 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 RNU2-69P-201ENST00000516061 100 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-1038P-201ENST00000516516 104 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 MTND4P7-201ENST00000523876 130 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 OR5AQ1P-201ENST00000527596 927 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 AP000889.1-201ENST00000530968 660 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 AK6P1-201ENST00000540219 478 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 EIF1P4-201ENST00000572664 335 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 LRRC37A5P-203ENST00000580181 585 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 uc_338.34-201ENST00000617467 174 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 AC026585.1-201ENST00000619582 524 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 MIR6766-201ENST00000622641 72 ntBASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC71LQ8N9Z2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
CCDC71LQ8N9Z2 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.9□□□□□ -2.1
CCDC71LQ8N9Z2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 155.9 ms