Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 HMGN2P3-201ENST00000433603 273 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 HMGN2P5-201ENST00000436882 273 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 AL031667.1-201ENST00000440222 725 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 snoU13.15-201ENST00000459407 104 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 SNORA48.11-201ENST00000517015 89 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 AP004607.1-201ENST00000524456 203 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 AP000873.5-201ENST00000533906 236 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 AK6P1-201ENST00000540219 478 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 PSMA3P-201ENST00000555485 635 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 AC104581.2-201ENST00000572227 430 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 AC093788.1-201ENST00000609356 927 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 MIR6845-201ENST00000613182 61 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 U6.42-201ENST00000618440 107 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 AL603755.1-201ENST00000619504 163 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 RMST_7.1-201ENST00000621935 268 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 MIR3529-201ENST00000637713 78 ntBASIC1.91□□□□□ -2.1
CCDC65Q8IXS2 HAUS6P2-201ENST00000433254 2404 ntBASIC1.9□□□□□ -2.1
CCDC65Q8IXS2 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 RNU4-42P-201ENST00000364738 142 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 RNU1-57P-201ENST00000384491 166 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 MIR186-201ENST00000384988 86 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 SNORA40.3-201ENST00000390964 122 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 SNORA26.8-201ENST00000391306 124 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 MIR1302-8-201ENST00000408342 128 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 RNU2-48P-201ENST00000410694 191 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 RPL21P90-201ENST00000415692 466 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 EDDM3CP-201ENST00000415977 425 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 DNAJC19P4-201ENST00000440115 345 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 SNRPFP4-201ENST00000456366 242 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 SNORD42A-201ENST00000459584 64 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 HMGB1P30-201ENST00000492455 606 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 MTCO3P9-201ENST00000506989 781 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 MTND3P25-201ENST00000509243 135 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 SNORA43.2-201ENST00000516652 128 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 AC109329.1-201ENST00000518744 317 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 AC087883.1-201ENST00000551882 391 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 RPL30P11-203ENST00000598995 310 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 AC243960.4-201ENST00000600532 288 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 AC096772.1-201ENST00000609146 564 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 RMST_4.1-201ENST00000616886 107 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 AC108479.2-201ENST00000617314 601 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 AC138649.3-201ENST00000622154 254 ntBASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.9□□□□□ -2.11
CCDC65Q8IXS2 RNU6-179P-201ENST00000363350 107 ntBASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 RNY1P12-201ENST00000364251 105 ntBASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 RNA5SP240-201ENST00000365355 128 ntBASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 SNORA25B-201ENST00000365507 128 ntBASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 CYCSP33-201ENST00000414485 327 ntBASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 UBE2V1P10-201ENST00000414685 269 ntBASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 AC096920.1-201ENST00000423991 241 ntBASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 ISCA1P6-201ENST00000427740 390 ntBASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 IFNA20P-201ENST00000436840 528 ntBASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 RPL23AP6-201ENST00000446637 472 ntBASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 AL033528.1-201ENST00000453780 140 ntBASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 CYP2C59P-201ENST00000457790 269 ntBASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 AC010486.2-201ENST00000505572 483 ntBASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 RNU6-295P-201ENST00000516901 104 ntBASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 AC022880.1-201ENST00000534017 973 ntBASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 AC093249.1-201ENST00000567049 203 ntBASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 DEFB122-202ENST00000569013 197 ntBASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 AC008250.2-201ENST00000615261 205 ntBASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 AP001506.1-201ENST00000615444 211 ntBASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 AC091304.6-201ENST00000619761 202 ntBASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 AC011155.2-201ENST00000623202 216 ntBASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CCDC65Q8IXS2 MTND5P17-201ENST00000418405 1603 ntBASIC1.88□□□□□ -2.11
CCDC65Q8IXS2 SNORD116-20-201ENST00000384529 92 ntBASIC1.88□□□□□ -2.11
CCDC65Q8IXS2 AC074117.2-201ENST00000417130 397 ntBASIC1.88□□□□□ -2.11
CCDC65Q8IXS2 AL158823.1-201ENST00000418441 478 ntBASIC1.88□□□□□ -2.11
CCDC65Q8IXS2 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.88□□□□□ -2.11
CCDC65Q8IXS2 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.88□□□□□ -2.11
CCDC65Q8IXS2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.88□□□□□ -2.11
CCDC65Q8IXS2 AC009238.1-201ENST00000442165 424 ntBASIC1.88□□□□□ -2.11
CCDC65Q8IXS2 MTND2P4-201ENST00000445034 1004 ntBASIC1.88□□□□□ -2.11
CCDC65Q8IXS2 AC009237.6-201ENST00000446969 424 ntBASIC1.88□□□□□ -2.11
CCDC65Q8IXS2 AC104058.1-201ENST00000448028 297 ntBASIC1.88□□□□□ -2.11
CCDC65Q8IXS2 RNU2-53P-201ENST00000516257 147 ntBASIC1.88□□□□□ -2.11
CCDC65Q8IXS2 RNU6-250P-201ENST00000516958 103 ntBASIC1.88□□□□□ -2.11
CCDC65Q8IXS2 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms