Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.61□□□□□ -1.83
UBE3BQ7Z3V4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
UBE3BQ7Z3V4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
UBE3BQ7Z3V4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
UBE3BQ7Z3V4 AL355596.1-201ENST00000565399 3996 ntBASIC3.61□□□□□ -1.83
UBE3BQ7Z3V4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 AP003122.5-201ENST00000527668 3766 ntBASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 Y_RNA.5-201ENST00000362334 102 ntBASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 Y_RNA.28-201ENST00000362554 111 ntBASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 RNU6-890P-201ENST00000384121 107 ntBASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 SNORD73A-201ENST00000386062 65 ntBASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 SNORA75.6-201ENST00000391318 127 ntBASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 AL096701.2-201ENST00000416920 238 ntBASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 YPEL5P1-201ENST00000419731 367 ntBASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 AC236972.1-201ENST00000433225 199 ntBASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 UBE2DNL-203ENST00000474922 222 ntBASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 AC092185.1-201ENST00000491371 97 ntBASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 RPL30P5-201ENST00000494923 336 ntBASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 AC123912.5-201ENST00000605470 343 ntBASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 AC019193.3-201ENST00000609144 554 ntBASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.6□□□□□ -1.83
UBE3BQ7Z3V4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 AL136164.4-201ENST00000625013 2135 ntBASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 MIR591-201ENST00000385290 95 ntBASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 RNU6-1197P-201ENST00000391183 107 ntBASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 AL591034.1-201ENST00000407447 340 ntBASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 Y_RNA.623-201ENST00000411128 95 ntBASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 AC018865.2-201ENST00000423631 129 ntBASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 USP9YP30-201ENST00000430729 455 ntBASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 AL627311.1-201ENST00000431514 115 ntBASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 NDUFB4P6-201ENST00000436819 366 ntBASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 UQCRHP3-201ENST00000451503 251 ntBASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 AC025755.1-201ENST00000521306 278 ntBASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 ELOCP29-201ENST00000588193 334 ntBASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 AP000787.2-201ENST00000604432 568 ntBASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 AC016925.2-201ENST00000605108 242 ntBASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 Z69720.2-201ENST00000624755 279 ntBASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.59□□□□□ -1.83
UBE3BQ7Z3V4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.58□□□□□ -1.84
UBE3BQ7Z3V4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.58□□□□□ -1.84
UBE3BQ7Z3V4 RNU6-306P-201ENST00000384617 107 ntBASIC3.58□□□□□ -1.84
UBE3BQ7Z3V4 MIR493-201ENST00000385254 89 ntBASIC3.58□□□□□ -1.84
UBE3BQ7Z3V4 USMG5P1-201ENST00000425964 177 ntBASIC3.58□□□□□ -1.84
UBE3BQ7Z3V4 AC087499.2-201ENST00000432861 149 ntBASIC3.58□□□□□ -1.84
UBE3BQ7Z3V4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.58□□□□□ -1.84
UBE3BQ7Z3V4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.58□□□□□ -1.84
UBE3BQ7Z3V4 RPL7P42-201ENST00000481005 679 ntBASIC3.58□□□□□ -1.84
UBE3BQ7Z3V4 RNA5SP165-201ENST00000517142 115 ntBASIC3.58□□□□□ -1.84
UBE3BQ7Z3V4 AC104576.1-201ENST00000524225 88 ntBASIC3.58□□□□□ -1.84
UBE3BQ7Z3V4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.58□□□□□ -1.84
UBE3BQ7Z3V4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.58□□□□□ -1.84
UBE3BQ7Z3V4 AL645944.1-201ENST00000603857 493 ntBASIC3.58□□□□□ -1.84
UBE3BQ7Z3V4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
UBE3BQ7Z3V4 MTND5P30-201ENST00000452896 1731 ntBASIC3.58□□□□□ -1.84
UBE3BQ7Z3V4 AL049641.1-201ENST00000441055 1948 ntBASIC3.58□□□□□ -1.84
UBE3BQ7Z3V4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 Y_RNA.151-201ENST00000363566 112 ntBASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 Y_RNA.252-201ENST00000364556 101 ntBASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 RNU6-596P-201ENST00000365395 98 ntBASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 Y_RNA.463-201ENST00000384271 102 ntBASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 Y_RNA.473-201ENST00000384333 102 ntBASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 RNU6-166P-201ENST00000384371 107 ntBASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 MIR517A-201ENST00000385001 87 ntBASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 AL445529.1-201ENST00000398713 389 ntBASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 RNU2-68P-201ENST00000410878 191 ntBASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 AL030996.1-201ENST00000411430 235 ntBASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 SNRPEP9-201ENST00000436794 238 ntBASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 AL035666.1-201ENST00000446195 348 ntBASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 AL583843.1-201ENST00000456070 346 ntBASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 MIR2053-201ENST00000459295 91 ntBASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 AC139453.3-201ENST00000493276 369 ntBASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 RNU6-1282P-201ENST00000516735 96 ntBASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 MIR4319-201ENST00000577285 85 ntBASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 MIR4474-201ENST00000579189 78 ntBASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 MIR4672-201ENST00000583126 81 ntBASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 AC006023.1-201ENST00000603944 259 ntBASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 AC004805.2-201ENST00000605382 482 ntBASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 AC090740.1-201ENST00000623193 2262 ntBASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 AC092608.2-201ENST00000624427 218 ntBASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.57□□□□□ -1.84
UBE3BQ7Z3V4 AC022336.2-201ENST00000568966 2538 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms