Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC097372.5-201ENST00000623665 376 ntBASIC2.71□□□□□ -1.98
SHFQ7M4L6 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.71□□□□□ -1.98
SHFQ7M4L6 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
SHFQ7M4L6 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SHFQ7M4L6 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SHFQ7M4L6 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.7□□□□□ -1.98
SHFQ7M4L6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
SHFQ7M4L6 RNU6-1059P-201ENST00000363752 98 ntBASIC2.7□□□□□ -1.98
SHFQ7M4L6 RNU6-1188P-201ENST00000363795 107 ntBASIC2.7□□□□□ -1.98
SHFQ7M4L6 Y_RNA.259-201ENST00000364619 101 ntBASIC2.7□□□□□ -1.98
SHFQ7M4L6 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SHFQ7M4L6 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
SHFQ7M4L6 AF228730.4-201ENST00000421457 183 ntBASIC2.7□□□□□ -1.98
SHFQ7M4L6 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.7□□□□□ -1.98
SHFQ7M4L6 USP9YP30-201ENST00000430729 455 ntBASIC2.7□□□□□ -1.98
SHFQ7M4L6 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.7□□□□□ -1.98
SHFQ7M4L6 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.7□□□□□ -1.98
SHFQ7M4L6 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.7□□□□□ -1.98
SHFQ7M4L6 PCMTD1P1-201ENST00000455560 355 ntBASIC2.7□□□□□ -1.98
SHFQ7M4L6 SNORD5.1-201ENST00000458800 75 ntBASIC2.7□□□□□ -1.98
SHFQ7M4L6 MED28P2-201ENST00000475771 317 ntBASIC2.7□□□□□ -1.98
SHFQ7M4L6 RPS27P26-201ENST00000494583 239 ntBASIC2.7□□□□□ -1.98
SHFQ7M4L6 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.7□□□□□ -1.98
SHFQ7M4L6 Y_RNA.718-201ENST00000517110 102 ntBASIC2.7□□□□□ -1.98
SHFQ7M4L6 AC009163.5-201ENST00000575421 637 ntBASIC2.7□□□□□ -1.98
SHFQ7M4L6 UBL5P2-201ENST00000583788 219 ntBASIC2.7□□□□□ -1.98
SHFQ7M4L6 AL442067.2-201ENST00000614033 363 ntBASIC2.7□□□□□ -1.98
SHFQ7M4L6 AC018692.3-201ENST00000623929 123 ntBASIC2.7□□□□□ -1.98
SHFQ7M4L6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SHFQ7M4L6 KPNA2P1-201ENST00000458289 1591 ntBASIC2.7□□□□□ -1.98
SHFQ7M4L6 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SHFQ7M4L6 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SHFQ7M4L6 MTCO1P12-201ENST00000414273 1543 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.69□□□□□ -1.98
SHFQ7M4L6 AC004944.1-201ENST00000517807 3059 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 RNU6-527P-201ENST00000363425 104 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 RNU6-799P-201ENST00000363567 107 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 CD24P4-201ENST00000382840 243 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 Y_RNA.419-201ENST00000384041 102 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 MIR767-201ENST00000390228 109 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 RNY4P36-201ENST00000391116 96 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SHFQ7M4L6 Y_RNA.594-201ENST00000410373 140 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 AC096649.2-201ENST00000416186 393 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 AC074117.2-201ENST00000417130 397 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.69□□□□□ -1.98
SHFQ7M4L6 MTND4P28-201ENST00000426217 387 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 PTGES3P4-201ENST00000426243 356 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 AC009414.1-201ENST00000427200 443 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 AL133396.1-201ENST00000432048 687 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SHFQ7M4L6 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.69□□□□□ -1.98
SHFQ7M4L6 FTH1P25-201ENST00000447665 469 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 AL358232.1-201ENST00000448030 501 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.69□□□□□ -1.98
SHFQ7M4L6 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.69□□□□□ -1.98
SHFQ7M4L6 Y_RNA.670-201ENST00000516255 105 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 RNU6-1213P-201ENST00000517075 94 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 SNORA31.23-201ENST00000517219 133 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.69□□□□□ -1.98
SHFQ7M4L6 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.69□□□□□ -1.98
SHFQ7M4L6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.69□□□□□ -1.98
SHFQ7M4L6 VN1R107P-201ENST00000601784 209 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 AP000654.2-201ENST00000605633 586 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 MIR3976-201ENST00000606807 139 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 AL731566.2-201ENST00000618971 317 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 AC002064.3-201ENST00000623448 346 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 AC110079.1-202ENST00000635213 138 ntBASIC2.69□□□□□ -1.98
SHFQ7M4L6 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SHFQ7M4L6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.68□□□□□ -1.98
SHFQ7M4L6 SNORD56.1-201ENST00000362913 68 ntBASIC2.68□□□□□ -1.98
SHFQ7M4L6 RNU1-105P-201ENST00000363470 161 ntBASIC2.68□□□□□ -1.98
SHFQ7M4L6 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
SHFQ7M4L6 RNU6-842P-201ENST00000384269 107 ntBASIC2.68□□□□□ -1.98
SHFQ7M4L6 RNU6-843P-201ENST00000384454 104 ntBASIC2.68□□□□□ -1.98
SHFQ7M4L6 RNU6-790P-201ENST00000384479 105 ntBASIC2.68□□□□□ -1.98
SHFQ7M4L6 MIR181A2-201ENST00000384863 110 ntBASIC2.68□□□□□ -1.98
SHFQ7M4L6 MIR449B-201ENST00000384995 97 ntBASIC2.68□□□□□ -1.98
SHFQ7M4L6 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
SHFQ7M4L6 AL513475.1-201ENST00000406602 315 ntBASIC2.68□□□□□ -1.98
SHFQ7M4L6 SNORD88.1-201ENST00000408684 91 ntBASIC2.68□□□□□ -1.98
SHFQ7M4L6 RNU6-1050P-201ENST00000410388 107 ntBASIC2.68□□□□□ -1.98
SHFQ7M4L6 RPS20P15-201ENST00000412792 311 ntBASIC2.68□□□□□ -1.98
SHFQ7M4L6 AL451074.5-201ENST00000415894 435 ntBASIC2.68□□□□□ -1.98
SHFQ7M4L6 AC236972.2-201ENST00000434979 310 ntBASIC2.68□□□□□ -1.98
SHFQ7M4L6 RPS29P27-201ENST00000463711 170 ntBASIC2.68□□□□□ -1.98
SHFQ7M4L6 AP001025.1-201ENST00000486139 332 ntBASIC2.68□□□□□ -1.98
SHFQ7M4L6 AC002456.2-201ENST00000509356 380 ntBASIC2.68□□□□□ -1.98
SHFQ7M4L6 RNU6-612P-201ENST00000516909 102 ntBASIC2.68□□□□□ -1.98
SHFQ7M4L6 SNORA31.18-201ENST00000517043 134 ntBASIC2.68□□□□□ -1.98
SHFQ7M4L6 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.68□□□□□ -1.98
SHFQ7M4L6 AC010186.2-204ENST00000537668 439 ntBASIC2.68□□□□□ -1.98
SHFQ7M4L6 DNAJC8P1-201ENST00000554535 372 ntBASIC2.68□□□□□ -1.98
SHFQ7M4L6 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.68□□□□□ -1.98
SHFQ7M4L6 BNIP3P16-201ENST00000589779 534 ntBASIC2.68□□□□□ -1.98
SHFQ7M4L6 AC011494.1-201ENST00000596454 237 ntBASIC2.68□□□□□ -1.98
SHFQ7M4L6 AL391813.1-201ENST00000603098 260 ntBASIC2.68□□□□□ -1.98
SHFQ7M4L6 AL133255.1-201ENST00000606374 441 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms