Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 HAUS6P2-201ENST00000433254 2404 ntBASIC2□□□□□ -2.09
ATL3Q6DD88 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
ATL3Q6DD88 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
ATL3Q6DD88 SNORD114-19-201ENST00000363072 75 ntBASIC1.99□□□□□ -2.09
ATL3Q6DD88 RNU6-1097P-201ENST00000363586 107 ntBASIC1.99□□□□□ -2.09
ATL3Q6DD88 Y_RNA.367-201ENST00000365544 101 ntBASIC1.99□□□□□ -2.09
ATL3Q6DD88 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
ATL3Q6DD88 RNU6-1179P-201ENST00000384667 107 ntBASIC1.99□□□□□ -2.09
ATL3Q6DD88 MIR9-3-201ENST00000385084 90 ntBASIC1.99□□□□□ -2.09
ATL3Q6DD88 GSTA9P-201ENST00000406231 611 ntBASIC1.99□□□□□ -2.09
ATL3Q6DD88 EDDM3CP-201ENST00000415977 425 ntBASIC1.99□□□□□ -2.09
ATL3Q6DD88 RPL31P35-201ENST00000431058 377 ntBASIC1.99□□□□□ -2.09
ATL3Q6DD88 AC000111.3-201ENST00000433478 193 ntBASIC1.99□□□□□ -2.09
ATL3Q6DD88 CALM1P1-201ENST00000442082 433 ntBASIC1.99□□□□□ -2.09
ATL3Q6DD88 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.99□□□□□ -2.09
ATL3Q6DD88 AP001025.1-201ENST00000486139 332 ntBASIC1.99□□□□□ -2.09
ATL3Q6DD88 YWHAEP4-201ENST00000505390 198 ntBASIC1.99□□□□□ -2.09
ATL3Q6DD88 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.99□□□□□ -2.09
ATL3Q6DD88 MTCO3P28-201ENST00000513351 515 ntBASIC1.99□□□□□ -2.09
ATL3Q6DD88 RNU2-44P-201ENST00000516795 194 ntBASIC1.99□□□□□ -2.09
ATL3Q6DD88 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.99□□□□□ -2.09
ATL3Q6DD88 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.99□□□□□ -2.09
ATL3Q6DD88 AC136619.2-201ENST00000563361 631 ntBASIC1.99□□□□□ -2.09
ATL3Q6DD88 AC121247.2-201ENST00000604776 136 ntBASIC1.99□□□□□ -2.09
ATL3Q6DD88 AC005296.1-201ENST00000616145 209 ntBASIC1.99□□□□□ -2.09
ATL3Q6DD88 RMST_7.1-201ENST00000621935 268 ntBASIC1.99□□□□□ -2.09
ATL3Q6DD88 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.99□□□□□ -2.09
ATL3Q6DD88 MIR3529-201ENST00000637713 78 ntBASIC1.99□□□□□ -2.09
ATL3Q6DD88 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.99□□□□□ -2.09
ATL3Q6DD88 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.99□□□□□ -2.09
ATL3Q6DD88 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.99□□□□□ -2.09
ATL3Q6DD88 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.99□□□□□ -2.09
ATL3Q6DD88 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
ATL3Q6DD88 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ATL3Q6DD88 RNU6-487P-201ENST00000365430 104 ntBASIC1.98□□□□□ -2.09
ATL3Q6DD88 MIR10A-201ENST00000385043 110 ntBASIC1.98□□□□□ -2.09
ATL3Q6DD88 AL512604.1-201ENST00000404812 257 ntBASIC1.98□□□□□ -2.09
ATL3Q6DD88 RNU2-3P-201ENST00000410144 191 ntBASIC1.98□□□□□ -2.09
ATL3Q6DD88 RPL21P90-201ENST00000415692 466 ntBASIC1.98□□□□□ -2.09
ATL3Q6DD88 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.98□□□□□ -2.09
ATL3Q6DD88 GPR143P-201ENST00000434155 205 ntBASIC1.98□□□□□ -2.09
ATL3Q6DD88 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.98□□□□□ -2.09
ATL3Q6DD88 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.98□□□□□ -2.09
ATL3Q6DD88 MTND1P26-201ENST00000440488 538 ntBASIC1.98□□□□□ -2.09
ATL3Q6DD88 AC079781.2-201ENST00000446424 169 ntBASIC1.98□□□□□ -2.09
ATL3Q6DD88 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.98□□□□□ -2.09
ATL3Q6DD88 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.98□□□□□ -2.09
ATL3Q6DD88 PPP1R2P5-201ENST00000457256 603 ntBASIC1.98□□□□□ -2.09
ATL3Q6DD88 MED28P2-201ENST00000475771 317 ntBASIC1.98□□□□□ -2.09
ATL3Q6DD88 AC107032.1-201ENST00000485945 480 ntBASIC1.98□□□□□ -2.09
ATL3Q6DD88 SNORA18.6-201ENST00000516792 115 ntBASIC1.98□□□□□ -2.09
ATL3Q6DD88 SNORA31.23-201ENST00000517219 133 ntBASIC1.98□□□□□ -2.09
ATL3Q6DD88 AC007834.2-201ENST00000536310 343 ntBASIC1.98□□□□□ -2.09
ATL3Q6DD88 AC137800.2-201ENST00000574375 120 ntBASIC1.98□□□□□ -2.09
ATL3Q6DD88 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.98□□□□□ -2.09
ATL3Q6DD88 AL670379.4-201ENST00000605279 254 ntBASIC1.98□□□□□ -2.09
ATL3Q6DD88 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.98□□□□□ -2.09
ATL3Q6DD88 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
ATL3Q6DD88 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.98□□□□□ -2.09
ATL3Q6DD88 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.98□□□□□ -2.09
ATL3Q6DD88 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
ATL3Q6DD88 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
ATL3Q6DD88 RNU6-1010P-201ENST00000362757 107 ntBASIC1.97□□□□□ -2.09
ATL3Q6DD88 RNU6-282P-201ENST00000365357 103 ntBASIC1.97□□□□□ -2.09
ATL3Q6DD88 RNU6-622P-201ENST00000384272 103 ntBASIC1.97□□□□□ -2.09
ATL3Q6DD88 MIR1-2-201ENST00000384961 85 ntBASIC1.97□□□□□ -2.09
ATL3Q6DD88 OR6C66P-201ENST00000414917 930 ntBASIC1.97□□□□□ -2.09
ATL3Q6DD88 BX295541.1-201ENST00000417774 250 ntBASIC1.97□□□□□ -2.09
ATL3Q6DD88 PIGFP2-201ENST00000421400 651 ntBASIC1.97□□□□□ -2.09
ATL3Q6DD88 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.97□□□□□ -2.09
ATL3Q6DD88 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.97□□□□□ -2.09
ATL3Q6DD88 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.97□□□□□ -2.09
ATL3Q6DD88 AL645568.3-201ENST00000433683 316 ntBASIC1.97□□□□□ -2.09
ATL3Q6DD88 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.97□□□□□ -2.09
ATL3Q6DD88 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.97□□□□□ -2.09
ATL3Q6DD88 HMGB3P17-201ENST00000504195 649 ntBASIC1.97□□□□□ -2.09
ATL3Q6DD88 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.97□□□□□ -2.09
ATL3Q6DD88 AC104806.1-201ENST00000508720 308 ntBASIC1.97□□□□□ -2.09
ATL3Q6DD88 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.97□□□□□ -2.09
ATL3Q6DD88 RNU6-410P-201ENST00000517006 107 ntBASIC1.97□□□□□ -2.09
ATL3Q6DD88 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.97□□□□□ -2.09
ATL3Q6DD88 OSBPL9P5-201ENST00000542581 171 ntBASIC1.97□□□□□ -2.09
ATL3Q6DD88 BNIP3P6-201ENST00000549284 499 ntBASIC1.97□□□□□ -2.09
ATL3Q6DD88 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.97□□□□□ -2.09
ATL3Q6DD88 MIR4255-201ENST00000579351 72 ntBASIC1.97□□□□□ -2.09
ATL3Q6DD88 AC073539.2-201ENST00000597113 165 ntBASIC1.97□□□□□ -2.09
ATL3Q6DD88 AL109918.3-201ENST00000603072 338 ntBASIC1.97□□□□□ -2.09
ATL3Q6DD88 AL713866.2-201ENST00000603579 219 ntBASIC1.97□□□□□ -2.09
ATL3Q6DD88 AC245014.2-201ENST00000603689 287 ntBASIC1.97□□□□□ -2.09
ATL3Q6DD88 SEPT7P9-203ENST00000604116 343 ntBASIC1.97□□□□□ -2.09
ATL3Q6DD88 AC246785.4-201ENST00000605374 287 ntBASIC1.97□□□□□ -2.09
ATL3Q6DD88 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.97□□□□□ -2.09
ATL3Q6DD88 AC087241.4-201ENST00000612441 480 ntBASIC1.97□□□□□ -2.09
ATL3Q6DD88 RMST_4.1-201ENST00000616886 107 ntBASIC1.97□□□□□ -2.09
ATL3Q6DD88 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.97□□□□□ -2.09
ATL3Q6DD88 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.97□□□□□ -2.09
ATL3Q6DD88 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
ATL3Q6DD88 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
ATL3Q6DD88 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.97□□□□□ -2.09
ATL3Q6DD88 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms