Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.44□□□□□ -1.86
SLC44A4Q53GD3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.43□□□□□ -1.86
SLC44A4Q53GD3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.43□□□□□ -1.86
SLC44A4Q53GD3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SLC44A4Q53GD3 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.43□□□□□ -1.86
SLC44A4Q53GD3 Y_RNA.404-201ENST00000383978 102 ntBASIC3.43□□□□□ -1.86
SLC44A4Q53GD3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.43□□□□□ -1.86
SLC44A4Q53GD3 SNAP23P1-201ENST00000433229 246 ntBASIC3.43□□□□□ -1.86
SLC44A4Q53GD3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.43□□□□□ -1.86
SLC44A4Q53GD3 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.43□□□□□ -1.86
SLC44A4Q53GD3 AL035666.1-201ENST00000446195 348 ntBASIC3.43□□□□□ -1.86
SLC44A4Q53GD3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.43□□□□□ -1.86
SLC44A4Q53GD3 MTATP6P7-201ENST00000453315 681 ntBASIC3.43□□□□□ -1.86
SLC44A4Q53GD3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.43□□□□□ -1.86
SLC44A4Q53GD3 AC109925.1-201ENST00000478069 331 ntBASIC3.43□□□□□ -1.86
SLC44A4Q53GD3 RN7SL283P-201ENST00000489055 303 ntBASIC3.43□□□□□ -1.86
SLC44A4Q53GD3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SLC44A4Q53GD3 MIR3124-201ENST00000582636 67 ntBASIC3.43□□□□□ -1.86
SLC44A4Q53GD3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.43□□□□□ -1.86
SLC44A4Q53GD3 AC005014.2-201ENST00000607795 599 ntBASIC3.43□□□□□ -1.86
SLC44A4Q53GD3 ATP5A1P2-202ENST00000616464 443 ntBASIC3.43□□□□□ -1.86
SLC44A4Q53GD3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.43□□□□□ -1.86
SLC44A4Q53GD3 AC006111.3-201ENST00000622137 383 ntBASIC3.43□□□□□ -1.86
SLC44A4Q53GD3 MTND5P30-201ENST00000452896 1731 ntBASIC3.43□□□□□ -1.86
SLC44A4Q53GD3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 MIR148B-201ENST00000362252 99 ntBASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 RNA5SP295-201ENST00000362655 121 ntBASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 RNU1-140P-201ENST00000365040 165 ntBASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 RNU6-890P-201ENST00000384121 107 ntBASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 MIR568-201ENST00000385036 95 ntBASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 AC098831.1-201ENST00000440661 216 ntBASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 AC091179.1-201ENST00000461606 579 ntBASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 AC097473.1-201ENST00000508142 408 ntBASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 RNA5SP385-201ENST00000515947 110 ntBASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 Y_RNA.670-201ENST00000516255 105 ntBASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 COX6CP5-201ENST00000527162 228 ntBASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 MIR4506-201ENST00000584693 77 ntBASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 AC020895.1-201ENST00000595362 272 ntBASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 AL121917.1-203ENST00000605534 577 ntBASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 AC073657.2-201ENST00000605661 303 ntBASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 AC009229.3-201ENST00000608056 282 ntBASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 AC083806.3-201ENST00000614016 455 ntBASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 AC007485.1-201ENST00000616755 206 ntBASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 Z69720.2-201ENST00000624755 279 ntBASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC44A4Q53GD3 AL136164.4-201ENST00000625013 2135 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 MIR30E-201ENST00000362104 92 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 RNU6-1115P-201ENST00000362490 106 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 RNA5SP197-201ENST00000363357 119 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 RNU6-1040P-201ENST00000383974 107 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 RNU6-198P-201ENST00000384258 104 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 RNU6-72P-201ENST00000384285 79 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 MIR518D-201ENST00000385014 87 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 MIR34A-201ENST00000385130 110 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 RNA5SP31-201ENST00000411144 127 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 AC245291.1-201ENST00000419501 328 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 TOMM20P4-201ENST00000427861 435 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 AL031274.1-201ENST00000450334 232 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 AL031183.1-201ENST00000457667 207 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 RPS4XP2-201ENST00000458402 793 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 AC116337.1-201ENST00000509680 687 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 RNU6-120P-201ENST00000516077 103 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 RNU6-1016P-201ENST00000516689 94 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 AC026371.1-201ENST00000551867 419 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 MIR4680-201ENST00000580906 66 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 AC008121.1-201ENST00000603244 268 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 MIR7106-201ENST00000612419 65 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 AC133104.2-201ENST00000615272 193 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 PISRT1.1-201ENST00000616930 107 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 AC022149.2-201ENST00000621061 203 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 AL137790.1-201ENST00000634283 177 ntBASIC3.41□□□□□ -1.86
SLC44A4Q53GD3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms