Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RNU6-1159P-201ENST00000362933 107 ntBASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 RNU6-1060P-201ENST00000384664 107 ntBASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 MIR518D-201ENST00000385014 87 ntBASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 SNORA40.19-201ENST00000390846 128 ntBASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 SNORA26.9-201ENST00000391322 122 ntBASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 DEFB108C-201ENST00000400154 252 ntBASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 EEF1A1P40-201ENST00000412883 573 ntBASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 USP9YP27-201ENST00000418455 438 ntBASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 DYNLL1P5-201ENST00000467158 270 ntBASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 RPL23AP42-201ENST00000471152 471 ntBASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 RN7SKP219-201ENST00000516825 296 ntBASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 ACA59.2-201ENST00000517061 156 ntBASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 AL391840.1-201ENST00000571144 367 ntBASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 MTND1P15-201ENST00000579262 949 ntBASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 MIR3611-201ENST00000584484 83 ntBASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 AC091834.1-201ENST00000614543 472 ntBASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 AC099842.1-201ENST00000619919 596 ntBASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 AC244517.12-201ENST00000623581 663 ntBASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.31□□□□□ -2.04
SHROOM1Q2M3G4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 RNA5SP125-201ENST00000364843 120 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 Y_RNA.381-201ENST00000365666 102 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 MIR10A-201ENST00000385043 110 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 FTH1P15-201ENST00000406984 280 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 Y_RNA.623-201ENST00000411128 95 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 AL365338.1-201ENST00000422282 858 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 RPL30P4-201ENST00000429309 333 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 MTCO3P5-201ENST00000433620 714 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 AC079781.2-201ENST00000446424 169 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 AL360271.2-201ENST00000447710 161 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 RPS29P11-201ENST00000496507 171 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 CKS1BP2-201ENST00000497342 240 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 AC093534.1-201ENST00000504977 132 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 AF213884.2-201ENST00000510417 903 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 AC079140.3-201ENST00000511111 550 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 RNU7-193P-201ENST00000516723 65 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 MIR3126-201ENST00000577443 74 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 AC025449.1-201ENST00000603896 529 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 AL022154.1-201ENST00000604698 785 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 U6.42-201ENST00000618440 107 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 MIR5739-201ENST00000619803 80 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 AC024581.2-201ENST00000619986 252 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 AL031601.2-202ENST00000622650 282 ntBASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
SHROOM1Q2M3G4 ZNF72P-201ENST00000425869 1908 ntBASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 CDC27P3-201ENST00000635418 1910 ntBASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 Y_RNA.51-201ENST00000362725 102 ntBASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 RNU6-371P-201ENST00000364283 108 ntBASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 RNU6-108P-201ENST00000365558 107 ntBASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 RNU6-1029P-201ENST00000384109 107 ntBASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 AC068050.1-201ENST00000394891 380 ntBASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 OR6C66P-201ENST00000414917 930 ntBASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 MTCO2P11-201ENST00000431069 680 ntBASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 RPL23AP7-203ENST00000449021 469 ntBASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 TPT1P7-201ENST00000458300 517 ntBASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 AC018437.1-201ENST00000492214 406 ntBASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 MTND3P25-201ENST00000509243 135 ntBASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms