Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC010409.1-201ENST00000487382 476 ntBASIC0.39□□□□□ -2.35
HMGXB3Q12766 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.39□□□□□ -2.35
HMGXB3Q12766 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.39□□□□□ -2.35
HMGXB3Q12766 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.39□□□□□ -2.35
HMGXB3Q12766 AP001429.1-201ENST00000602568 530 ntBASIC0.39□□□□□ -2.35
HMGXB3Q12766 AC107075.1-201ENST00000613695 314 ntBASIC0.39□□□□□ -2.35
HMGXB3Q12766 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.39□□□□□ -2.35
HMGXB3Q12766 AC138393.1-203ENST00000327086 343 ntBASIC0.38□□□□□ -2.35
HMGXB3Q12766 MIR608-201ENST00000384820 100 ntBASIC0.38□□□□□ -2.35
HMGXB3Q12766 RPS3AP37-201ENST00000419176 745 ntBASIC0.38□□□□□ -2.35
HMGXB3Q12766 EIF1P1-201ENST00000421436 341 ntBASIC0.38□□□□□ -2.35
HMGXB3Q12766 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.38□□□□□ -2.35
HMGXB3Q12766 AC002381.1-201ENST00000447049 280 ntBASIC0.38□□□□□ -2.35
HMGXB3Q12766 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.38□□□□□ -2.35
HMGXB3Q12766 MTCO2P2-201ENST00000591258 225 ntBASIC0.38□□□□□ -2.35
HMGXB3Q12766 AC004805.2-201ENST00000605382 482 ntBASIC0.38□□□□□ -2.35
HMGXB3Q12766 AC079416.3-201ENST00000624479 549 ntBASIC0.38□□□□□ -2.35
HMGXB3Q12766 AC134026.1-201ENST00000623249 2239 ntBASIC0.38□□□□□ -2.35
HMGXB3Q12766 MIR101-1-201ENST00000362265 75 ntBASIC0.38□□□□□ -2.35
HMGXB3Q12766 SNORD114-31-201ENST00000363219 75 ntBASIC0.38□□□□□ -2.35
HMGXB3Q12766 RNU6-45P-201ENST00000384471 107 ntBASIC0.38□□□□□ -2.35
HMGXB3Q12766 MIR601-201ENST00000385256 79 ntBASIC0.38□□□□□ -2.35
HMGXB3Q12766 CCNG1P1-201ENST00000406783 885 ntBASIC0.38□□□□□ -2.35
HMGXB3Q12766 FAM204CP-201ENST00000424489 642 ntBASIC0.38□□□□□ -2.35
HMGXB3Q12766 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.38□□□□□ -2.35
HMGXB3Q12766 RPS15AP9-201ENST00000439856 381 ntBASIC0.38□□□□□ -2.35
HMGXB3Q12766 RNVU1-2-201ENST00000516326 135 ntBASIC0.38□□□□□ -2.35
HMGXB3Q12766 RNU6-586P-201ENST00000517265 104 ntBASIC0.38□□□□□ -2.35
HMGXB3Q12766 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.38□□□□□ -2.35
HMGXB3Q12766 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.38□□□□□ -2.35
HMGXB3Q12766 AC008993.2-201ENST00000631744 806 ntBASIC0.38□□□□□ -2.35
HMGXB3Q12766 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.37□□□□□ -2.35
HMGXB3Q12766 SNORA4.1-201ENST00000364263 144 ntBASIC0.37□□□□□ -2.35
HMGXB3Q12766 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
HMGXB3Q12766 RPS3AP36-201ENST00000398190 775 ntBASIC0.37□□□□□ -2.35
HMGXB3Q12766 AL353691.1-201ENST00000451332 387 ntBASIC0.37□□□□□ -2.35
HMGXB3Q12766 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.37□□□□□ -2.35
HMGXB3Q12766 RPL31P3-201ENST00000458430 332 ntBASIC0.37□□□□□ -2.35
HMGXB3Q12766 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.37□□□□□ -2.35
HMGXB3Q12766 AC118282.2-201ENST00000508739 374 ntBASIC0.37□□□□□ -2.35
HMGXB3Q12766 AC109329.1-201ENST00000518744 317 ntBASIC0.37□□□□□ -2.35
HMGXB3Q12766 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.37□□□□□ -2.35
HMGXB3Q12766 AC022616.8-201ENST00000533569 253 ntBASIC0.37□□□□□ -2.35
HMGXB3Q12766 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.37□□□□□ -2.35
HMGXB3Q12766 AC002545.1-201ENST00000592511 181 ntBASIC0.37□□□□□ -2.35
HMGXB3Q12766 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.37□□□□□ -2.35
HMGXB3Q12766 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.37□□□□□ -2.35
HMGXB3Q12766 AL138726.1-201ENST00000614873 333 ntBASIC0.37□□□□□ -2.35
HMGXB3Q12766 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.37□□□□□ -2.35
HMGXB3Q12766 AC119674.1-220ENST00000641502 1048 ntBASIC0.37□□□□□ -2.35
HMGXB3Q12766 RNU6-112P-201ENST00000363599 104 ntBASIC0.36□□□□□ -2.35
HMGXB3Q12766 RNU6-891P-201ENST00000384280 111 ntBASIC0.36□□□□□ -2.35
HMGXB3Q12766 RNU6-1065P-201ENST00000384513 106 ntBASIC0.36□□□□□ -2.35
HMGXB3Q12766 MIR153-2-201ENST00000385225 87 ntBASIC0.36□□□□□ -2.35
HMGXB3Q12766 RNU2-48P-201ENST00000410694 191 ntBASIC0.36□□□□□ -2.35
HMGXB3Q12766 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.36□□□□□ -2.35
HMGXB3Q12766 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.36□□□□□ -2.35
HMGXB3Q12766 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.36□□□□□ -2.35
HMGXB3Q12766 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.36□□□□□ -2.35
HMGXB3Q12766 RPL32P14-201ENST00000463196 378 ntBASIC0.36□□□□□ -2.35
HMGXB3Q12766 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.36□□□□□ -2.35
HMGXB3Q12766 RNA5SP290-201ENST00000517133 127 ntBASIC0.36□□□□□ -2.35
HMGXB3Q12766 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.36□□□□□ -2.35
HMGXB3Q12766 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.36□□□□□ -2.35
HMGXB3Q12766 BNIP3P16-201ENST00000589779 534 ntBASIC0.36□□□□□ -2.35
HMGXB3Q12766 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.36□□□□□ -2.35
HMGXB3Q12766 AL357094.1-201ENST00000603845 844 ntBASIC0.36□□□□□ -2.35
HMGXB3Q12766 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.36□□□□□ -2.35
HMGXB3Q12766 AC009950.2-201ENST00000636548 183 ntBASIC0.36□□□□□ -2.35
HMGXB3Q12766 RNY4P24-201ENST00000362735 96 ntBASIC0.35□□□□□ -2.35
HMGXB3Q12766 RNU6-77P-201ENST00000410554 91 ntBASIC0.35□□□□□ -2.35
HMGXB3Q12766 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.35□□□□□ -2.35
HMGXB3Q12766 MTND4P6-201ENST00000438297 472 ntBASIC0.35□□□□□ -2.35
HMGXB3Q12766 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.35□□□□□ -2.35
HMGXB3Q12766 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.35□□□□□ -2.35
HMGXB3Q12766 AL357075.2-201ENST00000614906 189 ntBASIC0.35□□□□□ -2.35
HMGXB3Q12766 AC104820.1-201ENST00000624183 307 ntBASIC0.35□□□□□ -2.35
HMGXB3Q12766 AC009033.1-201ENST00000624279 431 ntBASIC0.35□□□□□ -2.35
HMGXB3Q12766 RNU6-360P-201ENST00000390944 104 ntBASIC0.34□□□□□ -2.35
HMGXB3Q12766 AC119751.3-201ENST00000399720 670 ntBASIC0.34□□□□□ -2.35
HMGXB3Q12766 NDUFA5P7-201ENST00000452914 242 ntBASIC0.34□□□□□ -2.35
HMGXB3Q12766 Y_RNA.644-201ENST00000459006 113 ntBASIC0.34□□□□□ -2.35
HMGXB3Q12766 RPL26P26-201ENST00000480251 434 ntBASIC0.34□□□□□ -2.35
HMGXB3Q12766 AC084024.2-201ENST00000503480 791 ntBASIC0.34□□□□□ -2.35
HMGXB3Q12766 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.34□□□□□ -2.35
HMGXB3Q12766 RNU6-889P-201ENST00000517189 103 ntBASIC0.34□□□□□ -2.35
HMGXB3Q12766 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.34□□□□□ -2.35
HMGXB3Q12766 RNY1P9-201ENST00000532431 109 ntBASIC0.34□□□□□ -2.35
HMGXB3Q12766 AP000763.2-201ENST00000540641 163 ntBASIC0.34□□□□□ -2.35
HMGXB3Q12766 TRAV32-201ENST00000553993 340 ntBASIC0.34□□□□□ -2.35
HMGXB3Q12766 AP000860.1-201ENST00000605250 559 ntBASIC0.34□□□□□ -2.35
HMGXB3Q12766 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.34□□□□□ -2.36
HMGXB3Q12766 Y_RNA.18-201ENST00000362461 102 ntBASIC0.33□□□□□ -2.36
HMGXB3Q12766 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.33□□□□□ -2.36
HMGXB3Q12766 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.33□□□□□ -2.36
HMGXB3Q12766 AC005345.1-201ENST00000431868 217 ntBASIC0.33□□□□□ -2.36
HMGXB3Q12766 AC016717.1-201ENST00000448918 286 ntBASIC0.33□□□□□ -2.36
HMGXB3Q12766 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.33□□□□□ -2.36
HMGXB3Q12766 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.33□□□□□ -2.36
HMGXB3Q12766 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms