Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
ABCA4P78363 RNU6-898P-201ENST00000365627 104 ntBASIC0.53□□□□□ -2.32
ABCA4P78363 TPMTP2-201ENST00000414372 726 ntBASIC0.53□□□□□ -2.32
ABCA4P78363 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.53□□□□□ -2.32
ABCA4P78363 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.53□□□□□ -2.32
ABCA4P78363 AC008628.1-201ENST00000508663 265 ntBASIC0.53□□□□□ -2.32
ABCA4P78363 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.53□□□□□ -2.32
ABCA4P78363 CYP3A52P-201ENST00000563326 91 ntBASIC0.53□□□□□ -2.32
ABCA4P78363 AL353997.4-201ENST00000586196 166 ntBASIC0.53□□□□□ -2.32
ABCA4P78363 CLIC4P2-201ENST00000601934 717 ntBASIC0.53□□□□□ -2.32
ABCA4P78363 MIR6134-201ENST00000617606 109 ntBASIC0.53□□□□□ -2.32
ABCA4P78363 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.53□□□□□ -2.32
ABCA4P78363 AL445264.1-201ENST00000621719 171 ntBASIC0.53□□□□□ -2.32
ABCA4P78363 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.53□□□□□ -2.32
ABCA4P78363 RNU1-36P-201ENST00000365130 165 ntBASIC0.53□□□□□ -2.33
ABCA4P78363 RNU6-1222P-201ENST00000384615 107 ntBASIC0.53□□□□□ -2.33
ABCA4P78363 MIR597-201ENST00000384968 97 ntBASIC0.53□□□□□ -2.33
ABCA4P78363 MIR146A-201ENST00000385201 99 ntBASIC0.53□□□□□ -2.33
ABCA4P78363 RNU1-119P-201ENST00000391122 165 ntBASIC0.53□□□□□ -2.33
ABCA4P78363 MTND5P15-201ENST00000434246 349 ntBASIC0.53□□□□□ -2.33
ABCA4P78363 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.53□□□□□ -2.33
ABCA4P78363 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.53□□□□□ -2.33
ABCA4P78363 snoU13.8-201ENST00000458890 104 ntBASIC0.53□□□□□ -2.33
ABCA4P78363 snoU13.9-201ENST00000458927 103 ntBASIC0.53□□□□□ -2.33
ABCA4P78363 RNA5SP269-201ENST00000459032 137 ntBASIC0.53□□□□□ -2.33
ABCA4P78363 RPL39P28-201ENST00000465655 155 ntBASIC0.53□□□□□ -2.33
ABCA4P78363 AC099513.1-201ENST00000490423 301 ntBASIC0.53□□□□□ -2.33
ABCA4P78363 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.53□□□□□ -2.33
ABCA4P78363 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC0.53□□□□□ -2.33
ABCA4P78363 BNIP3P26-201ENST00000600827 554 ntBASIC0.53□□□□□ -2.33
ABCA4P78363 AC013244.2-201ENST00000603396 103 ntBASIC0.53□□□□□ -2.33
ABCA4P78363 AL355802.4-201ENST00000607635 548 ntBASIC0.53□□□□□ -2.33
ABCA4P78363 AC093788.1-201ENST00000609356 927 ntBASIC0.53□□□□□ -2.33
ABCA4P78363 AC005332.6-201ENST00000613178 446 ntBASIC0.53□□□□□ -2.33
ABCA4P78363 AC068787.1-201ENST00000623908 691 ntBASIC0.53□□□□□ -2.33
ABCA4P78363 AC027335.2-201ENST00000624030 375 ntBASIC0.53□□□□□ -2.33
ABCA4P78363 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
ABCA4P78363 RNA5SP493-201ENST00000364115 91 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.52□□□□□ -2.33
ABCA4P78363 RNU2-42P-201ENST00000410697 113 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 AL139421.1-201ENST00000423010 169 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 AC139712.2-201ENST00000424302 339 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.52□□□□□ -2.33
ABCA4P78363 MTND1P28-201ENST00000435623 950 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 RPS27P22-201ENST00000478056 241 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 SCARNA16.2-201ENST00000516520 172 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 RNU6-678P-201ENST00000516832 109 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.52□□□□□ -2.33
ABCA4P78363 AC073410.2-201ENST00000603240 332 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 AC100814.1-201ENST00000606963 623 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 AC004492.1-201ENST00000607036 742 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 AC004908.3-201ENST00000610248 625 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 AL021879.1-201ENST00000611756 288 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 AC130454.1-201ENST00000622948 401 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 AC019226.1-201ENST00000625666 515 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
ABCA4P78363 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.52□□□□□ -2.33
ABCA4P78363 OR5T3-201ENST00000303059 1023 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
ABCA4P78363 MIR26B-201ENST00000362251 77 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 RNU6-28P-201ENST00000362378 107 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 RNU6-216P-201ENST00000363282 104 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 RNU6-1187P-201ENST00000364771 110 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.52□□□□□ -2.33
ABCA4P78363 AC019070.1-201ENST00000415008 1024 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 MTCO2P5-201ENST00000422621 426 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 AC025465.3-201ENST00000510570 311 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
ABCA4P78363 AP003484.1-201ENST00000530974 250 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.52□□□□□ -2.33
ABCA4P78363 MIR4636-201ENST00000582271 80 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 MIR4661-201ENST00000582720 75 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 AC012557.2-201ENST00000605919 418 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 AC067863.3-201ENST00000624172 122 ntBASIC0.52□□□□□ -2.33
ABCA4P78363 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
ABCA4P78363 RNY4P3-201ENST00000365254 95 ntBASIC0.51□□□□□ -2.33
ABCA4P78363 SNORA25-201ENST00000384384 134 ntBASIC0.51□□□□□ -2.33
ABCA4P78363 AC092634.2-201ENST00000428146 1010 ntBASIC0.51□□□□□ -2.33
ABCA4P78363 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.51□□□□□ -2.33
ABCA4P78363 SNRPEP7-201ENST00000438350 220 ntBASIC0.51□□□□□ -2.33
ABCA4P78363 PRPS1P1-201ENST00000445305 876 ntBASIC0.51□□□□□ -2.33
ABCA4P78363 MRPL42P4-201ENST00000453267 443 ntBASIC0.51□□□□□ -2.33
ABCA4P78363 RNU6-333P-201ENST00000459117 107 ntBASIC0.51□□□□□ -2.33
ABCA4P78363 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.51□□□□□ -2.33
ABCA4P78363 HMGN1P13-201ENST00000505795 138 ntBASIC0.51□□□□□ -2.33
ABCA4P78363 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.51□□□□□ -2.33
ABCA4P78363 AC022616.8-201ENST00000533569 253 ntBASIC0.51□□□□□ -2.33
ABCA4P78363 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.51□□□□□ -2.33
ABCA4P78363 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.51□□□□□ -2.33
ABCA4P78363 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.51□□□□□ -2.33
ABCA4P78363 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.51□□□□□ -2.33
ABCA4P78363 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.51□□□□□ -2.33
ABCA4P78363 AC010620.1-201ENST00000601088 1102 ntBASIC0.51□□□□□ -2.33
ABCA4P78363 AP000654.2-201ENST00000605633 586 ntBASIC0.51□□□□□ -2.33
ABCA4P78363 AC007792.1-201ENST00000623023 402 ntBASIC0.51□□□□□ -2.33
ABCA4P78363 AL136313.1-201ENST00000624804 202 ntBASIC0.51□□□□□ -2.33
ABCA4P78363 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
ABCA4P78363 HSBP1P2-201ENST00000299671 229 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 RNU1-23P-201ENST00000363361 144 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 RNU6-30P-201ENST00000384561 107 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms