Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.87□□□□□ -2.27
HIST1H3AP68431 AC108078.1-201ENST00000508073 725 ntBASIC0.87□□□□□ -2.27
HIST1H3AP68431 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.87□□□□□ -2.27
HIST1H3AP68431 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.87□□□□□ -2.27
HIST1H3AP68431 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
HIST1H3AP68431 HMGB1P33-201ENST00000563485 527 ntBASIC0.87□□□□□ -2.27
HIST1H3AP68431 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.87□□□□□ -2.27
HIST1H3AP68431 RMST_4.1-201ENST00000616886 107 ntBASIC0.87□□□□□ -2.27
HIST1H3AP68431 AL589994.2-201ENST00000621124 579 ntBASIC0.87□□□□□ -2.27
HIST1H3AP68431 AC022513.1-201ENST00000624512 117 ntBASIC0.87□□□□□ -2.27
HIST1H3AP68431 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.87□□□□□ -2.27
HIST1H3AP68431 MTND5P42-201ENST00000637720 498 ntBASIC0.87□□□□□ -2.27
HIST1H3AP68431 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.87□□□□□ -2.27
HIST1H3AP68431 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.86□□□□□ -2.27
HIST1H3AP68431 SNORA70.7-201ENST00000384159 133 ntBASIC0.86□□□□□ -2.27
HIST1H3AP68431 SNORD116-20-201ENST00000384529 92 ntBASIC0.86□□□□□ -2.27
HIST1H3AP68431 PIGPP2-201ENST00000411569 458 ntBASIC0.86□□□□□ -2.27
HIST1H3AP68431 AC069282.1-201ENST00000411911 526 ntBASIC0.86□□□□□ -2.27
HIST1H3AP68431 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.86□□□□□ -2.27
HIST1H3AP68431 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.86□□□□□ -2.27
HIST1H3AP68431 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.86□□□□□ -2.27
HIST1H3AP68431 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.86□□□□□ -2.27
HIST1H3AP68431 AL669831.1-202ENST00000428504 417 ntBASIC0.86□□□□□ -2.27
HIST1H3AP68431 AL365400.1-201ENST00000431854 640 ntBASIC0.86□□□□□ -2.27
HIST1H3AP68431 RPS15AP10-201ENST00000432472 382 ntBASIC0.86□□□□□ -2.27
HIST1H3AP68431 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.86□□□□□ -2.27
HIST1H3AP68431 AC092473.1-201ENST00000441098 221 ntBASIC0.86□□□□□ -2.27
HIST1H3AP68431 RPL9P9-202ENST00000466501 579 ntBASIC0.86□□□□□ -2.27
HIST1H3AP68431 SUMO2P5-201ENST00000506790 245 ntBASIC0.86□□□□□ -2.27
HIST1H3AP68431 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.86□□□□□ -2.27
HIST1H3AP68431 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.86□□□□□ -2.27
HIST1H3AP68431 RNU6-237P-201ENST00000515985 71 ntBASIC0.86□□□□□ -2.27
HIST1H3AP68431 RNU6-914P-201ENST00000516749 109 ntBASIC0.86□□□□□ -2.27
HIST1H3AP68431 RNA5SP404-201ENST00000517118 132 ntBASIC0.86□□□□□ -2.27
HIST1H3AP68431 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.86□□□□□ -2.27
HIST1H3AP68431 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.86□□□□□ -2.27
HIST1H3AP68431 CENPUP1-201ENST00000526649 1202 ntBASIC0.86□□□□□ -2.27
HIST1H3AP68431 CR383656.8-201ENST00000549046 145 ntBASIC0.86□□□□□ -2.27
HIST1H3AP68431 MIR1273C-201ENST00000578669 77 ntBASIC0.86□□□□□ -2.27
HIST1H3AP68431 AC080078.3-201ENST00000605407 463 ntBASIC0.86□□□□□ -2.27
HIST1H3AP68431 AL359821.1-201ENST00000605519 182 ntBASIC0.86□□□□□ -2.27
HIST1H3AP68431 AP000654.2-201ENST00000605633 586 ntBASIC0.86□□□□□ -2.27
HIST1H3AP68431 AC022893.3-201ENST00000607665 437 ntBASIC0.86□□□□□ -2.27
HIST1H3AP68431 RNU5A-8P-201ENST00000364102 114 ntBASIC0.85□□□□□ -2.27
HIST1H3AP68431 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
HIST1H3AP68431 FGF7P8-201ENST00000402994 292 ntBASIC0.85□□□□□ -2.27
HIST1H3AP68431 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.85□□□□□ -2.27
HIST1H3AP68431 AL365338.1-201ENST00000422282 858 ntBASIC0.85□□□□□ -2.27
HIST1H3AP68431 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
HIST1H3AP68431 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.85□□□□□ -2.27
HIST1H3AP68431 AL603825.1-201ENST00000438481 80 ntBASIC0.85□□□□□ -2.27
HIST1H3AP68431 HSPE1P9-201ENST00000440046 311 ntBASIC0.85□□□□□ -2.27
HIST1H3AP68431 AC009646.1-201ENST00000510455 318 ntBASIC0.85□□□□□ -2.27
HIST1H3AP68431 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
HIST1H3AP68431 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.85□□□□□ -2.27
HIST1H3AP68431 AC098848.2-201ENST00000588023 330 ntBASIC0.85□□□□□ -2.27
HIST1H3AP68431 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.85□□□□□ -2.27
HIST1H3AP68431 AC022022.2-201ENST00000602989 360 ntBASIC0.85□□□□□ -2.27
HIST1H3AP68431 AC005776.1-201ENST00000603164 290 ntBASIC0.85□□□□□ -2.27
HIST1H3AP68431 HSPE1P19-201ENST00000603327 295 ntBASIC0.85□□□□□ -2.27
HIST1H3AP68431 AC092574.1-201ENST00000609771 420 ntBASIC0.85□□□□□ -2.27
HIST1H3AP68431 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.85□□□□□ -2.27
HIST1H3AP68431 MIR8065-201ENST00000620577 100 ntBASIC0.85□□□□□ -2.27
HIST1H3AP68431 AL359757.2-201ENST00000624309 274 ntBASIC0.85□□□□□ -2.27
HIST1H3AP68431 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.85□□□□□ -2.27
HIST1H3AP68431 AC095038.3-201ENST00000634439 195 ntBASIC0.85□□□□□ -2.27
HIST1H3AP68431 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
HIST1H3AP68431 AC099654.5-201ENST00000636479 350 ntBASIC0.85□□□□□ -2.27
HIST1H3AP68431 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.85□□□□□ -2.27
HIST1H3AP68431 LINC02555-201ENST00000563933 1951 ntBASIC0.85□□□□□ -2.27
HIST1H3AP68431 RNU1-22P-201ENST00000363334 158 ntBASIC0.84□□□□□ -2.27
HIST1H3AP68431 RNU6-395P-201ENST00000365662 106 ntBASIC0.84□□□□□ -2.27
HIST1H3AP68431 RNU6-1065P-201ENST00000384513 106 ntBASIC0.84□□□□□ -2.27
HIST1H3AP68431 AL357139.1-201ENST00000407792 426 ntBASIC0.84□□□□□ -2.27
HIST1H3AP68431 Y_RNA.595-201ENST00000410403 105 ntBASIC0.84□□□□□ -2.27
HIST1H3AP68431 RPS15AP12-201ENST00000419498 388 ntBASIC0.84□□□□□ -2.27
HIST1H3AP68431 AL590556.1-201ENST00000423231 483 ntBASIC0.84□□□□□ -2.27
HIST1H3AP68431 FTH1P12-201ENST00000432137 551 ntBASIC0.84□□□□□ -2.27
HIST1H3AP68431 PGBD4P5-201ENST00000445958 426 ntBASIC0.84□□□□□ -2.27
HIST1H3AP68431 RPL39P29-201ENST00000447779 157 ntBASIC0.84□□□□□ -2.27
HIST1H3AP68431 AC132479.1-201ENST00000449160 144 ntBASIC0.84□□□□□ -2.27
HIST1H3AP68431 AC108059.3-201ENST00000456388 214 ntBASIC0.84□□□□□ -2.27
HIST1H3AP68431 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.84□□□□□ -2.27
HIST1H3AP68431 AL139824.2-201ENST00000458731 1095 ntBASIC0.84□□□□□ -2.27
HIST1H3AP68431 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.84□□□□□ -2.27
HIST1H3AP68431 AC097473.1-201ENST00000508142 408 ntBASIC0.84□□□□□ -2.27
HIST1H3AP68431 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.84□□□□□ -2.27
HIST1H3AP68431 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.84□□□□□ -2.27
HIST1H3AP68431 MIR4498-201ENST00000577599 66 ntBASIC0.84□□□□□ -2.27
HIST1H3AP68431 AC130324.3-201ENST00000614165 542 ntBASIC0.84□□□□□ -2.27
HIST1H3AP68431 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
HIST1H3AP68431 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.83□□□□□ -2.28
HIST1H3AP68431 MIR1305-201ENST00000408300 86 ntBASIC0.83□□□□□ -2.28
HIST1H3AP68431 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.83□□□□□ -2.28
HIST1H3AP68431 AL161935.2-201ENST00000414627 60 ntBASIC0.83□□□□□ -2.28
HIST1H3AP68431 EBAG9P1-201ENST00000418955 543 ntBASIC0.83□□□□□ -2.28
HIST1H3AP68431 EIF1P1-201ENST00000421436 341 ntBASIC0.83□□□□□ -2.28
HIST1H3AP68431 AC013262.1-201ENST00000426710 252 ntBASIC0.83□□□□□ -2.28
HIST1H3AP68431 AL022238.1-201ENST00000442557 355 ntBASIC0.83□□□□□ -2.28
HIST1H3AP68431 MTCO1P27-201ENST00000448269 226 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms