Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC-0.79□□□□□ -2.54
RPL39P62891 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC-0.79□□□□□ -2.54
RPL39P62891 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC-0.79□□□□□ -2.54
RPL39P62891 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC-0.79□□□□□ -2.54
RPL39P62891 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.79□□□□□ -2.54
RPL39P62891 SNRPGP20-201ENST00000604477 205 ntBASIC-0.79□□□□□ -2.54
RPL39P62891 MIR8064-201ENST00000612863 90 ntBASIC-0.79□□□□□ -2.54
RPL39P62891 AC002550.2-201ENST00000621246 394 ntBASIC-0.79□□□□□ -2.54
RPL39P62891 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.8□□□□□ -2.54
RPL39P62891 AC078974.1-201ENST00000411597 223 ntBASIC-0.8□□□□□ -2.54
RPL39P62891 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.8□□□□□ -2.54
RPL39P62891 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC-0.8□□□□□ -2.54
RPL39P62891 TAAR7P-201ENST00000436141 242 ntBASIC-0.8□□□□□ -2.54
RPL39P62891 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC-0.8□□□□□ -2.54
RPL39P62891 SNORD126-201ENST00000459475 77 ntBASIC-0.8□□□□□ -2.54
RPL39P62891 VPS26AP1-201ENST00000483197 979 ntBASIC-0.8□□□□□ -2.54
RPL39P62891 SMURF2P1-201ENST00000514992 481 ntBASIC-0.8□□□□□ -2.54
RPL39P62891 PTK2-220ENST00000520151 573 ntTSL 4 BASIC-0.8□□□□□ -2.54
RPL39P62891 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC-0.8□□□□□ -2.54
RPL39P62891 EEF1B2P4-201ENST00000551398 348 ntBASIC-0.8□□□□□ -2.54
RPL39P62891 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC-0.8□□□□□ -2.54
RPL39P62891 AL355816.2-201ENST00000610049 647 ntBASIC-0.8□□□□□ -2.54
RPL39P62891 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC-0.8□□□□□ -2.54
RPL39P62891 MIR548AZ-201ENST00000616567 95 ntBASIC-0.8□□□□□ -2.54
RPL39P62891 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.81□□□□□ -2.54
RPL39P62891 RNU6-296P-201ENST00000384608 107 ntBASIC-0.81□□□□□ -2.54
RPL39P62891 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.81□□□□□ -2.54
RPL39P62891 RNU6-1054P-201ENST00000411293 104 ntBASIC-0.81□□□□□ -2.54
RPL39P62891 MED13P1-201ENST00000428342 171 ntBASIC-0.81□□□□□ -2.54
RPL39P62891 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC-0.81□□□□□ -2.54
RPL39P62891 SEPT7P5-201ENST00000434048 306 ntBASIC-0.81□□□□□ -2.54
RPL39P62891 SEPT7P4-201ENST00000437076 306 ntBASIC-0.81□□□□□ -2.54
RPL39P62891 AL049734.2-201ENST00000441066 616 ntBASIC-0.81□□□□□ -2.54
RPL39P62891 MTND2P19-201ENST00000449129 1012 ntBASIC-0.81□□□□□ -2.54
RPL39P62891 AC104982.1-201ENST00000478775 574 ntBASIC-0.81□□□□□ -2.54
RPL39P62891 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC-0.81□□□□□ -2.54
RPL39P62891 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC-0.81□□□□□ -2.54
RPL39P62891 ADAM3B-201ENST00000569937 840 ntBASIC-0.81□□□□□ -2.54
RPL39P62891 MIR3921-201ENST00000577308 85 ntBASIC-0.81□□□□□ -2.54
RPL39P62891 AC117490.2-201ENST00000610042 594 ntBASIC-0.81□□□□□ -2.54
RPL39P62891 AC240442.1-201ENST00000616055 283 ntBASIC-0.81□□□□□ -2.54
RPL39P62891 SNORD3E-201ENST00000362899 217 ntBASIC-0.82□□□□□ -2.54
RPL39P62891 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.82□□□□□ -2.54
RPL39P62891 MIR1290-201ENST00000408735 78 ntBASIC-0.82□□□□□ -2.54
RPL39P62891 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC-0.82□□□□□ -2.54
RPL39P62891 AC016909.1-201ENST00000415916 166 ntBASIC-0.82□□□□□ -2.54
RPL39P62891 MTND4LP11-201ENST00000422184 280 ntBASIC-0.82□□□□□ -2.54
RPL39P62891 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC-0.82□□□□□ -2.54
RPL39P62891 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.82□□□□□ -2.54
RPL39P62891 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC-0.82□□□□□ -2.54
RPL39P62891 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC-0.82□□□□□ -2.54
RPL39P62891 MTCO3P2-201ENST00000457365 171 ntBASIC-0.82□□□□□ -2.54
RPL39P62891 AC104164.3-201ENST00000467363 1258 ntBASIC-0.82□□□□□ -2.54
RPL39P62891 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.82□□□□□ -2.54
RPL39P62891 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC-0.82□□□□□ -2.54
RPL39P62891 AL031176.1-201ENST00000604554 466 ntBASIC-0.82□□□□□ -2.54
RPL39P62891 PLD1-217ENST00000627725 174 ntTSL 5 BASIC-0.82□□□□□ -2.54
RPL39P62891 MIR6759-201ENST00000638110 65 ntBASIC-0.82□□□□□ -2.54
RPL39P62891 Z75746.1-201ENST00000440243 2080 ntBASIC-0.82□□□□□ -2.54
RPL39P62891 SNORA80D-201ENST00000384488 135 ntBASIC-0.83□□□□□ -2.54
RPL39P62891 MIR610-201ENST00000385139 96 ntBASIC-0.83□□□□□ -2.54
RPL39P62891 MIR325-201ENST00000385260 98 ntBASIC-0.83□□□□□ -2.54
RPL39P62891 TRBV8-1-201ENST00000481590 279 ntBASIC-0.83□□□□□ -2.54
RPL39P62891 RPL30P1-201ENST00000488676 339 ntBASIC-0.83□□□□□ -2.54
RPL39P62891 AC016256.1-201ENST00000547971 354 ntBASIC-0.83□□□□□ -2.54
RPL39P62891 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC-0.83□□□□□ -2.54
RPL39P62891 AL137246.1-201ENST00000607072 977 ntBASIC-0.83□□□□□ -2.54
RPL39P62891 AP005229.2-201ENST00000609980 697 ntBASIC-0.83□□□□□ -2.54
RPL39P62891 AL078595.3-201ENST00000623815 1166 ntBASIC-0.83□□□□□ -2.54
RPL39P62891 SNORA18.1-201ENST00000363418 128 ntBASIC-0.84□□□□□ -2.54
RPL39P62891 RNU6-666P-201ENST00000363499 107 ntBASIC-0.84□□□□□ -2.54
RPL39P62891 MIR145-201ENST00000384967 88 ntBASIC-0.84□□□□□ -2.54
RPL39P62891 AC007435.1-201ENST00000421086 415 ntBASIC-0.84□□□□□ -2.54
RPL39P62891 MTND1P20-201ENST00000430341 950 ntBASIC-0.84□□□□□ -2.54
RPL39P62891 AC004865.1-201ENST00000442276 1003 ntBASIC-0.84□□□□□ -2.54
RPL39P62891 MTND4P19-201ENST00000446659 478 ntBASIC-0.84□□□□□ -2.54
RPL39P62891 AC007395.1-201ENST00000451333 677 ntBASIC-0.84□□□□□ -2.54
RPL39P62891 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC-0.84□□□□□ -2.54
RPL39P62891 AC048334.1-201ENST00000477975 159 ntBASIC-0.84□□□□□ -2.54
RPL39P62891 AC067904.2-201ENST00000517322 1283 ntBASIC-0.84□□□□□ -2.54
RPL39P62891 TRAV32-201ENST00000553993 340 ntBASIC-0.84□□□□□ -2.54
RPL39P62891 AC092325.1-201ENST00000566449 554 ntBASIC-0.84□□□□□ -2.54
RPL39P62891 CLIC4P2-201ENST00000601934 717 ntBASIC-0.84□□□□□ -2.54
RPL39P62891 AC006157.1-201ENST00000611750 366 ntBASIC-0.84□□□□□ -2.54
RPL39P62891 AC022513.1-201ENST00000624512 117 ntBASIC-0.84□□□□□ -2.54
RPL39P62891 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.84□□□□□ -2.54
RPL39P62891 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.85□□□□□ -2.54
RPL39P62891 RNU6-929P-201ENST00000384429 107 ntBASIC-0.85□□□□□ -2.55
RPL39P62891 SNORA8.3-201ENST00000384679 139 ntBASIC-0.85□□□□□ -2.55
RPL39P62891 AC119751.3-201ENST00000399720 670 ntBASIC-0.85□□□□□ -2.55
RPL39P62891 RNU6-177P-201ENST00000411257 104 ntBASIC-0.85□□□□□ -2.55
RPL39P62891 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.85□□□□□ -2.55
RPL39P62891 AC000111.3-201ENST00000433478 193 ntBASIC-0.85□□□□□ -2.55
RPL39P62891 RPL7P55-201ENST00000450522 746 ntBASIC-0.85□□□□□ -2.55
RPL39P62891 PTP4A1P4-201ENST00000512479 322 ntBASIC-0.85□□□□□ -2.55
RPL39P62891 AP001180.6-201ENST00000584918 159 ntBASIC-0.85□□□□□ -2.55
RPL39P62891 AC005176.2-201ENST00000596933 147 ntBASIC-0.85□□□□□ -2.55
RPL39P62891 AL592221.1-201ENST00000605266 382 ntBASIC-0.85□□□□□ -2.55
RPL39P62891 MIR101-1-201ENST00000362265 75 ntBASIC-0.86□□□□□ -2.55
RPL39P62891 SNORA25.3-201ENST00000363205 127 ntBASIC-0.86□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms