Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 HMGN1P7-201ENST00000491722 313 ntBASIC0.42□□□□□ -2.34
CKS1BP61024 AF131216.2-201ENST00000512316 564 ntBASIC0.42□□□□□ -2.34
CKS1BP61024 RNA5SP458-201ENST00000516188 119 ntBASIC0.42□□□□□ -2.34
CKS1BP61024 SNORA76.2-201ENST00000517095 137 ntBASIC0.42□□□□□ -2.34
CKS1BP61024 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.42□□□□□ -2.34
CKS1BP61024 AC023538.1-201ENST00000534576 736 ntBASIC0.42□□□□□ -2.34
CKS1BP61024 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.42□□□□□ -2.34
CKS1BP61024 ZNF971P-201ENST00000562068 1249 ntBASIC0.42□□□□□ -2.34
CKS1BP61024 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.42□□□□□ -2.34
CKS1BP61024 AC092656.1-203ENST00000624134 423 ntBASIC0.42□□□□□ -2.34
CKS1BP61024 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.42□□□□□ -2.34
CKS1BP61024 Y_RNA.40-201ENST00000362645 93 ntBASIC0.41□□□□□ -2.34
CKS1BP61024 RNU6-392P-201ENST00000364926 101 ntBASIC0.41□□□□□ -2.34
CKS1BP61024 Y_RNA.332-201ENST00000365271 113 ntBASIC0.41□□□□□ -2.34
CKS1BP61024 RNU6-622P-201ENST00000384272 103 ntBASIC0.41□□□□□ -2.34
CKS1BP61024 MIR508-201ENST00000384857 115 ntBASIC0.41□□□□□ -2.34
CKS1BP61024 SNORD12-201ENST00000391002 90 ntBASIC0.41□□□□□ -2.34
CKS1BP61024 Y_RNA.597-201ENST00000410463 100 ntBASIC0.41□□□□□ -2.34
CKS1BP61024 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.41□□□□□ -2.34
CKS1BP61024 AC063976.4-201ENST00000421971 163 ntBASIC0.41□□□□□ -2.34
CKS1BP61024 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.41□□□□□ -2.34
CKS1BP61024 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.41□□□□□ -2.34
CKS1BP61024 MTND4P6-201ENST00000438297 472 ntBASIC0.41□□□□□ -2.34
CKS1BP61024 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.41□□□□□ -2.34
CKS1BP61024 AL157398.1-201ENST00000452981 186 ntBASIC0.41□□□□□ -2.34
CKS1BP61024 AL353752.1-201ENST00000454946 260 ntBASIC0.41□□□□□ -2.34
CKS1BP61024 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.41□□□□□ -2.34
CKS1BP61024 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.41□□□□□ -2.34
CKS1BP61024 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.41□□□□□ -2.34
CKS1BP61024 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.41□□□□□ -2.34
CKS1BP61024 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.41□□□□□ -2.34
CKS1BP61024 RNU4-54P-201ENST00000516428 129 ntBASIC0.41□□□□□ -2.34
CKS1BP61024 RN7SKP265-201ENST00000516448 223 ntBASIC0.41□□□□□ -2.34
CKS1BP61024 RNA5SP168-201ENST00000516642 112 ntBASIC0.41□□□□□ -2.34
CKS1BP61024 SNORA31.19-201ENST00000517079 126 ntBASIC0.41□□□□□ -2.34
CKS1BP61024 AC023632.1-201ENST00000518463 375 ntBASIC0.41□□□□□ -2.34
CKS1BP61024 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.41□□□□□ -2.34
CKS1BP61024 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.41□□□□□ -2.34
CKS1BP61024 AC133485.1-201ENST00000567176 124 ntBASIC0.41□□□□□ -2.34
CKS1BP61024 AC138907.6-201ENST00000568401 126 ntBASIC0.41□□□□□ -2.34
CKS1BP61024 AL590229.1-201ENST00000603497 542 ntBASIC0.41□□□□□ -2.34
CKS1BP61024 BNIP3P10-201ENST00000605360 577 ntBASIC0.41□□□□□ -2.34
CKS1BP61024 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.41□□□□□ -2.34
CKS1BP61024 AC104465.1-201ENST00000611365 139 ntBASIC0.41□□□□□ -2.34
CKS1BP61024 AL133216.2-202ENST00000634512 349 ntBASIC0.41□□□□□ -2.34
CKS1BP61024 AC010615.1-201ENST00000594254 1764 ntBASIC0.41□□□□□ -2.34
CKS1BP61024 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.4□□□□□ -2.34
CKS1BP61024 RNU6-17P-201ENST00000384245 107 ntBASIC0.4□□□□□ -2.35
CKS1BP61024 RNU6-18P-201ENST00000384527 107 ntBASIC0.4□□□□□ -2.35
CKS1BP61024 SNORA40C-201ENST00000391285 128 ntBASIC0.4□□□□□ -2.35
CKS1BP61024 AL359634.1-202ENST00000404721 284 ntBASIC0.4□□□□□ -2.35
CKS1BP61024 CYCSP33-201ENST00000414485 327 ntBASIC0.4□□□□□ -2.35
CKS1BP61024 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.4□□□□□ -2.35
CKS1BP61024 RAC1P6-201ENST00000423911 575 ntBASIC0.4□□□□□ -2.35
CKS1BP61024 RPS15AP10-201ENST00000432472 382 ntBASIC0.4□□□□□ -2.35
CKS1BP61024 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.4□□□□□ -2.35
CKS1BP61024 CALM1P1-201ENST00000442082 433 ntBASIC0.4□□□□□ -2.35
CKS1BP61024 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
CKS1BP61024 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.4□□□□□ -2.35
CKS1BP61024 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.4□□□□□ -2.35
CKS1BP61024 SUMO2P18-201ENST00000518873 252 ntBASIC0.4□□□□□ -2.35
CKS1BP61024 AP000907.2-201ENST00000530827 353 ntBASIC0.4□□□□□ -2.35
CKS1BP61024 OR6C7P-201ENST00000547875 934 ntBASIC0.4□□□□□ -2.35
CKS1BP61024 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.4□□□□□ -2.35
CKS1BP61024 AC022432.1-201ENST00000595739 310 ntBASIC0.4□□□□□ -2.35
CKS1BP61024 AL359821.1-201ENST00000605519 182 ntBASIC0.4□□□□□ -2.35
CKS1BP61024 AC018630.2-201ENST00000534866 2403 ntBASIC0.39□□□□□ -2.35
CKS1BP61024 RNA5SP361-201ENST00000362686 118 ntBASIC0.39□□□□□ -2.35
CKS1BP61024 SNORD18A-201ENST00000363753 72 ntBASIC0.39□□□□□ -2.35
CKS1BP61024 MIR605-201ENST00000385078 83 ntBASIC0.39□□□□□ -2.35
CKS1BP61024 HMGN1P14-201ENST00000412459 517 ntBASIC0.39□□□□□ -2.35
CKS1BP61024 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.39□□□□□ -2.35
CKS1BP61024 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0.39□□□□□ -2.35
CKS1BP61024 MTND2P20-201ENST00000440805 661 ntBASIC0.39□□□□□ -2.35
CKS1BP61024 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.39□□□□□ -2.35
CKS1BP61024 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.39□□□□□ -2.35
CKS1BP61024 AC079140.3-201ENST00000511111 550 ntBASIC0.39□□□□□ -2.35
CKS1BP61024 RNU6-143P-201ENST00000516942 93 ntBASIC0.39□□□□□ -2.35
CKS1BP61024 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
CKS1BP61024 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.39□□□□□ -2.35
CKS1BP61024 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.39□□□□□ -2.35
CKS1BP61024 AC078795.2-201ENST00000602835 1252 ntBASIC0.39□□□□□ -2.35
CKS1BP61024 AC005332.6-201ENST00000613178 446 ntBASIC0.39□□□□□ -2.35
CKS1BP61024 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.39□□□□□ -2.35
CKS1BP61024 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
CKS1BP61024 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.39□□□□□ -2.35
CKS1BP61024 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.39□□□□□ -2.35
CKS1BP61024 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
CKS1BP61024 SNORA63D-201ENST00000364359 132 ntBASIC0.38□□□□□ -2.35
CKS1BP61024 AL356776.1-201ENST00000406574 447 ntBASIC0.38□□□□□ -2.35
CKS1BP61024 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.38□□□□□ -2.35
CKS1BP61024 MRPL42P4-201ENST00000453267 443 ntBASIC0.38□□□□□ -2.35
CKS1BP61024 AC108729.2-201ENST00000476543 840 ntBASIC0.38□□□□□ -2.35
CKS1BP61024 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.38□□□□□ -2.35
CKS1BP61024 AC074344.1-201ENST00000512823 224 ntBASIC0.38□□□□□ -2.35
CKS1BP61024 TRMT112P2-201ENST00000512910 132 ntBASIC0.38□□□□□ -2.35
CKS1BP61024 AC008837.2-201ENST00000513076 418 ntBASIC0.38□□□□□ -2.35
CKS1BP61024 AC108729.3-201ENST00000513484 108 ntBASIC0.38□□□□□ -2.35
CKS1BP61024 SNORA31.4-201ENST00000516049 129 ntBASIC0.38□□□□□ -2.35
CKS1BP61024 RNU6-165P-201ENST00000517170 99 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms