Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.17□□□□□ -2.06
SRP54P61011 GMFBP1-201ENST00000467831 427 ntBASIC2.17□□□□□ -2.06
SRP54P61011 AL121594.1-201ENST00000475906 575 ntBASIC2.17□□□□□ -2.06
SRP54P61011 RNU6-445P-201ENST00000516949 107 ntBASIC2.17□□□□□ -2.06
SRP54P61011 RNU6-586P-201ENST00000517265 104 ntBASIC2.17□□□□□ -2.06
SRP54P61011 AP002963.1-201ENST00000530590 184 ntBASIC2.17□□□□□ -2.06
SRP54P61011 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.17□□□□□ -2.06
SRP54P61011 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.17□□□□□ -2.06
SRP54P61011 MIR3126-201ENST00000577443 74 ntBASIC2.17□□□□□ -2.06
SRP54P61011 AC040904.1-201ENST00000590850 223 ntBASIC2.17□□□□□ -2.06
SRP54P61011 AC008945.2-201ENST00000606056 604 ntBASIC2.17□□□□□ -2.06
SRP54P61011 AC099842.1-201ENST00000619919 596 ntBASIC2.17□□□□□ -2.06
SRP54P61011 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SRP54P61011 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SRP54P61011 AL359851.1-201ENST00000569460 4997 ntBASIC2.16□□□□□ -2.06
SRP54P61011 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.16□□□□□ -2.06
SRP54P61011 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
SRP54P61011 RNU6-1210P-201ENST00000363775 107 ntBASIC2.16□□□□□ -2.06
SRP54P61011 RNU6-715P-201ENST00000365204 103 ntBASIC2.16□□□□□ -2.06
SRP54P61011 RNU5E-7P-201ENST00000365290 117 ntBASIC2.16□□□□□ -2.06
SRP54P61011 SNORA25B-201ENST00000365507 128 ntBASIC2.16□□□□□ -2.06
SRP54P61011 RNU6-1029P-201ENST00000384109 107 ntBASIC2.16□□□□□ -2.06
SRP54P61011 SNORA64-201ENST00000384674 134 ntBASIC2.16□□□□□ -2.06
SRP54P61011 RNU6-606P-201ENST00000384721 111 ntBASIC2.16□□□□□ -2.06
SRP54P61011 RNU2-40P-201ENST00000410833 196 ntBASIC2.16□□□□□ -2.06
SRP54P61011 EDDM3CP-201ENST00000415977 425 ntBASIC2.16□□□□□ -2.06
SRP54P61011 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.16□□□□□ -2.06
SRP54P61011 SRIP2-201ENST00000428470 166 ntBASIC2.16□□□□□ -2.06
SRP54P61011 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.16□□□□□ -2.06
SRP54P61011 AC098826.2-201ENST00000452011 651 ntBASIC2.16□□□□□ -2.06
SRP54P61011 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.16□□□□□ -2.06
SRP54P61011 MTCYBP40-201ENST00000509390 1135 ntBASIC2.16□□□□□ -2.06
SRP54P61011 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.16□□□□□ -2.06
SRP54P61011 RNA5SP200-201ENST00000516360 103 ntBASIC2.16□□□□□ -2.06
SRP54P61011 Y_RNA.695-201ENST00000516715 107 ntBASIC2.16□□□□□ -2.06
SRP54P61011 RNA5SP137-201ENST00000516833 135 ntBASIC2.16□□□□□ -2.06
SRP54P61011 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.16□□□□□ -2.06
SRP54P61011 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.16□□□□□ -2.06
SRP54P61011 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.16□□□□□ -2.06
SRP54P61011 MIR3913-1-201ENST00000577744 102 ntBASIC2.16□□□□□ -2.06
SRP54P61011 AC002984.1-201ENST00000591692 448 ntBASIC2.16□□□□□ -2.06
SRP54P61011 APOOP1-201ENST00000604695 592 ntBASIC2.16□□□□□ -2.06
SRP54P61011 AC087752.4-201ENST00000605911 462 ntBASIC2.16□□□□□ -2.06
SRP54P61011 AL158063.1-201ENST00000615349 536 ntBASIC2.16□□□□□ -2.06
SRP54P61011 AC009090.3-201ENST00000616553 565 ntBASIC2.16□□□□□ -2.06
SRP54P61011 AC009831.4-201ENST00000620744 325 ntBASIC2.16□□□□□ -2.06
SRP54P61011 AC007792.1-201ENST00000623023 402 ntBASIC2.16□□□□□ -2.06
SRP54P61011 AL390237.1-201ENST00000404226 1415 ntBASIC2.16□□□□□ -2.06
SRP54P61011 AC002543.1-201ENST00000299783 1954 ntBASIC2.16□□□□□ -2.06
SRP54P61011 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.15□□□□□ -2.06
SRP54P61011 AL591034.2-201ENST00000402839 359 ntBASIC2.15□□□□□ -2.07
SRP54P61011 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.15□□□□□ -2.07
SRP54P61011 AIMP1P2-201ENST00000425294 312 ntBASIC2.15□□□□□ -2.07
SRP54P61011 AL669831.1-202ENST00000428504 417 ntBASIC2.15□□□□□ -2.07
SRP54P61011 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.15□□□□□ -2.07
SRP54P61011 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.15□□□□□ -2.07
SRP54P61011 GTF2IP13-201ENST00000438487 386 ntBASIC2.15□□□□□ -2.07
SRP54P61011 AL031667.1-201ENST00000440222 725 ntBASIC2.15□□□□□ -2.07
SRP54P61011 C1DP4-201ENST00000455429 424 ntBASIC2.15□□□□□ -2.07
SRP54P61011 RPS29P15-201ENST00000458329 171 ntBASIC2.15□□□□□ -2.07
SRP54P61011 AC018868.1-201ENST00000491307 315 ntBASIC2.15□□□□□ -2.07
SRP54P61011 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.15□□□□□ -2.07
SRP54P61011 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.15□□□□□ -2.07
SRP54P61011 ARL2BPP4-201ENST00000506854 471 ntBASIC2.15□□□□□ -2.07
SRP54P61011 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.15□□□□□ -2.07
SRP54P61011 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.15□□□□□ -2.07
SRP54P61011 LRRC34P2-201ENST00000514850 553 ntBASIC2.15□□□□□ -2.07
SRP54P61011 RNU6-1178P-201ENST00000516674 107 ntBASIC2.15□□□□□ -2.07
SRP54P61011 MIR514B-201ENST00000516774 80 ntBASIC2.15□□□□□ -2.07
SRP54P61011 RNU6-430P-201ENST00000517078 107 ntBASIC2.15□□□□□ -2.07
SRP54P61011 SNORA31.25-201ENST00000517242 134 ntBASIC2.15□□□□□ -2.07
SRP54P61011 MTCO2P4-201ENST00000517968 247 ntBASIC2.15□□□□□ -2.07
SRP54P61011 AC026407.1-201ENST00000518369 204 ntBASIC2.15□□□□□ -2.07
SRP54P61011 AC034114.1-201ENST00000520293 285 ntBASIC2.15□□□□□ -2.07
SRP54P61011 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.15□□□□□ -2.07
SRP54P61011 MIR4703-201ENST00000577728 79 ntBASIC2.15□□□□□ -2.07
SRP54P61011 MIR4448-201ENST00000584360 86 ntBASIC2.15□□□□□ -2.07
SRP54P61011 Z99497.2-201ENST00000603634 310 ntBASIC2.15□□□□□ -2.07
SRP54P61011 Z69720.2-201ENST00000624755 279 ntBASIC2.15□□□□□ -2.07
SRP54P61011 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.15□□□□□ -2.07
SRP54P61011 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SRP54P61011 MTND4P1-201ENST00000457501 1466 ntBASIC2.14□□□□□ -2.07
SRP54P61011 SNORD56.1-201ENST00000362913 68 ntBASIC2.14□□□□□ -2.07
SRP54P61011 RNU1-23P-201ENST00000363361 144 ntBASIC2.14□□□□□ -2.07
SRP54P61011 RNU6-1032P-201ENST00000384100 107 ntBASIC2.14□□□□□ -2.07
SRP54P61011 SNORA67.3-201ENST00000384366 140 ntBASIC2.14□□□□□ -2.07
SRP54P61011 CBX3P9-201ENST00000402326 552 ntBASIC2.14□□□□□ -2.07
SRP54P61011 BTF3L4P1-201ENST00000413813 468 ntBASIC2.14□□□□□ -2.07
SRP54P61011 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.14□□□□□ -2.07
SRP54P61011 MTND2P4-201ENST00000445034 1004 ntBASIC2.14□□□□□ -2.07
SRP54P61011 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.14□□□□□ -2.07
SRP54P61011 MTND1P18-201ENST00000448191 573 ntBASIC2.14□□□□□ -2.07
SRP54P61011 UBL5P3-201ENST00000475112 231 ntBASIC2.14□□□□□ -2.07
SRP54P61011 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.14□□□□□ -2.07
SRP54P61011 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.14□□□□□ -2.07
SRP54P61011 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.14□□□□□ -2.07
SRP54P61011 SCARNA16.3-201ENST00000516595 184 ntBASIC2.14□□□□□ -2.07
SRP54P61011 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.14□□□□□ -2.07
SRP54P61011 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.14□□□□□ -2.07
SRP54P61011 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms