Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 POLHP1-201ENST00000411806 470 ntBASIC1.53□□□□□ -2.16
CLDN6P56747 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.53□□□□□ -2.16
CLDN6P56747 AL365400.1-201ENST00000431854 640 ntBASIC1.53□□□□□ -2.16
CLDN6P56747 FARSBP1-201ENST00000435808 1778 ntBASIC1.53□□□□□ -2.16
CLDN6P56747 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.53□□□□□ -2.16
CLDN6P56747 NDUFB1P2-201ENST00000449477 176 ntBASIC1.53□□□□□ -2.16
CLDN6P56747 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.53□□□□□ -2.16
CLDN6P56747 TOMM22P6-201ENST00000465035 409 ntBASIC1.53□□□□□ -2.16
CLDN6P56747 AP001025.1-201ENST00000486139 332 ntBASIC1.53□□□□□ -2.16
CLDN6P56747 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.53□□□□□ -2.16
CLDN6P56747 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.53□□□□□ -2.16
CLDN6P56747 AC022616.8-201ENST00000533569 253 ntBASIC1.53□□□□□ -2.16
CLDN6P56747 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.53□□□□□ -2.16
CLDN6P56747 MTND4P33-201ENST00000556706 766 ntBASIC1.53□□□□□ -2.16
CLDN6P56747 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.53□□□□□ -2.16
CLDN6P56747 MIR4713-201ENST00000582691 75 ntBASIC1.53□□□□□ -2.16
CLDN6P56747 MIR548AC-201ENST00000585049 88 ntBASIC1.53□□□□□ -2.16
CLDN6P56747 MTCO2P2-201ENST00000591258 225 ntBASIC1.53□□□□□ -2.16
CLDN6P56747 DEFB131E-202ENST00000602581 683 ntBASIC1.53□□□□□ -2.16
CLDN6P56747 AL138889.2-201ENST00000603883 242 ntBASIC1.53□□□□□ -2.16
CLDN6P56747 SEPT7P9-203ENST00000604116 343 ntBASIC1.53□□□□□ -2.16
CLDN6P56747 AP002360.4-201ENST00000606980 481 ntBASIC1.53□□□□□ -2.16
CLDN6P56747 RMST_6.1-201ENST00000611980 203 ntBASIC1.53□□□□□ -2.16
CLDN6P56747 AL132822.1-201ENST00000617063 513 ntBASIC1.53□□□□□ -2.16
CLDN6P56747 AC093648.1-201ENST00000623546 606 ntBASIC1.53□□□□□ -2.16
CLDN6P56747 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CLDN6P56747 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CLDN6P56747 AC073343.1-201ENST00000328239 651 ntBASIC1.52□□□□□ -2.17
CLDN6P56747 RNU6-944P-201ENST00000364023 107 ntBASIC1.52□□□□□ -2.17
CLDN6P56747 SNORA67.6-201ENST00000391093 99 ntBASIC1.52□□□□□ -2.17
CLDN6P56747 CBX3P9-201ENST00000402326 552 ntBASIC1.52□□□□□ -2.17
CLDN6P56747 RNU2-23P-201ENST00000410545 195 ntBASIC1.52□□□□□ -2.17
CLDN6P56747 RN7SKP101-201ENST00000411376 320 ntBASIC1.52□□□□□ -2.17
CLDN6P56747 AP000275.1-201ENST00000411943 390 ntBASIC1.52□□□□□ -2.17
CLDN6P56747 AC118469.1-201ENST00000442943 488 ntBASIC1.52□□□□□ -2.17
CLDN6P56747 AL136380.1-201ENST00000447970 162 ntBASIC1.52□□□□□ -2.17
CLDN6P56747 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.52□□□□□ -2.17
CLDN6P56747 AC020699.1-201ENST00000505161 445 ntBASIC1.52□□□□□ -2.17
CLDN6P56747 PTP4A1P4-201ENST00000512479 322 ntBASIC1.52□□□□□ -2.17
CLDN6P56747 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.52□□□□□ -2.17
CLDN6P56747 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.52□□□□□ -2.17
CLDN6P56747 RNU6-965P-201ENST00000516721 96 ntBASIC1.52□□□□□ -2.17
CLDN6P56747 RNA5SP102-201ENST00000516865 106 ntBASIC1.52□□□□□ -2.17
CLDN6P56747 RN7SKP256-201ENST00000517201 314 ntBASIC1.52□□□□□ -2.17
CLDN6P56747 SNORA31.23-201ENST00000517219 133 ntBASIC1.52□□□□□ -2.17
CLDN6P56747 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.52□□□□□ -2.17
CLDN6P56747 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.52□□□□□ -2.17
CLDN6P56747 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.52□□□□□ -2.17
CLDN6P56747 MIR6504-201ENST00000613520 61 ntBASIC1.52□□□□□ -2.17
CLDN6P56747 SCARNA4-202ENST00000625402 129 ntBASIC1.52□□□□□ -2.17
CLDN6P56747 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.52□□□□□ -2.17
CLDN6P56747 AC092192.1-201ENST00000633154 1018 ntBASIC1.52□□□□□ -2.17
CLDN6P56747 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CLDN6P56747 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.52□□□□□ -2.17
CLDN6P56747 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.51□□□□□ -2.17
CLDN6P56747 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CLDN6P56747 OR4G2P-201ENST00000328113 903 ntBASIC1.51□□□□□ -2.17
CLDN6P56747 SNORD56.2-201ENST00000363242 71 ntBASIC1.51□□□□□ -2.17
CLDN6P56747 RNU6-743P-201ENST00000364151 106 ntBASIC1.51□□□□□ -2.17
CLDN6P56747 RNU6-53P-201ENST00000365367 106 ntBASIC1.51□□□□□ -2.17
CLDN6P56747 RNU6-1200P-201ENST00000384162 107 ntBASIC1.51□□□□□ -2.17
CLDN6P56747 RNY1P14-201ENST00000384426 108 ntBASIC1.51□□□□□ -2.17
CLDN6P56747 RNU6-1179P-201ENST00000384667 107 ntBASIC1.51□□□□□ -2.17
CLDN6P56747 BTF3L4P2-201ENST00000392798 346 ntBASIC1.51□□□□□ -2.17
CLDN6P56747 SNORD56-201ENST00000413522 71 ntBASIC1.51□□□□□ -2.17
CLDN6P56747 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.51□□□□□ -2.17
CLDN6P56747 VN1R36P-201ENST00000414936 291 ntBASIC1.51□□□□□ -2.17
CLDN6P56747 EIF4EP2-201ENST00000422816 654 ntBASIC1.51□□□□□ -2.17
CLDN6P56747 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.51□□□□□ -2.17
CLDN6P56747 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.51□□□□□ -2.17
CLDN6P56747 AP000797.1-201ENST00000478870 387 ntBASIC1.51□□□□□ -2.17
CLDN6P56747 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.51□□□□□ -2.17
CLDN6P56747 Y_RNA.687-201ENST00000516558 91 ntBASIC1.51□□□□□ -2.17
CLDN6P56747 RNU5A-4P-201ENST00000516588 111 ntBASIC1.51□□□□□ -2.17
CLDN6P56747 RNA5SP337-201ENST00000517007 109 ntBASIC1.51□□□□□ -2.17
CLDN6P56747 ADI1P3-201ENST00000549509 470 ntBASIC1.51□□□□□ -2.17
CLDN6P56747 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.51□□□□□ -2.17
CLDN6P56747 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.51□□□□□ -2.17
CLDN6P56747 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.51□□□□□ -2.17
CLDN6P56747 AC022254.1-201ENST00000567857 235 ntBASIC1.51□□□□□ -2.17
CLDN6P56747 AC092106.3-201ENST00000611308 722 ntBASIC1.51□□□□□ -2.17
CLDN6P56747 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.51□□□□□ -2.17
CLDN6P56747 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.51□□□□□ -2.17
CLDN6P56747 AP002782.1-201ENST00000623107 614 ntBASIC1.51□□□□□ -2.17
CLDN6P56747 AC091895.1-201ENST00000624494 256 ntBASIC1.51□□□□□ -2.17
CLDN6P56747 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
CLDN6P56747 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CLDN6P56747 MIR29B2-201ENST00000385055 81 ntBASIC1.5□□□□□ -2.17
CLDN6P56747 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CLDN6P56747 CISD1P1-201ENST00000393907 327 ntBASIC1.5□□□□□ -2.17
CLDN6P56747 OR9R1P-201ENST00000412200 877 ntBASIC1.5□□□□□ -2.17
CLDN6P56747 SRIP3-201ENST00000413200 219 ntBASIC1.5□□□□□ -2.17
CLDN6P56747 RPL22P18-201ENST00000417197 377 ntBASIC1.5□□□□□ -2.17
CLDN6P56747 AL354692.1-201ENST00000423044 315 ntBASIC1.5□□□□□ -2.17
CLDN6P56747 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.5□□□□□ -2.17
CLDN6P56747 UBE2V1P4-201ENST00000425374 344 ntBASIC1.5□□□□□ -2.17
CLDN6P56747 CR769776.1-201ENST00000441254 787 ntBASIC1.5□□□□□ -2.17
CLDN6P56747 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.5□□□□□ -2.17
CLDN6P56747 AC006026.2-201ENST00000457376 180 ntBASIC1.5□□□□□ -2.17
CLDN6P56747 AC112204.1-201ENST00000502591 103 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms