Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.95□□□□□ -1.94
HDAC4P56524 OOSP1P1-201ENST00000423265 274 ntBASIC2.95□□□□□ -1.94
HDAC4P56524 NDUFA5P4-201ENST00000436704 385 ntBASIC2.95□□□□□ -1.94
HDAC4P56524 IFNA20P-201ENST00000436840 528 ntBASIC2.95□□□□□ -1.94
HDAC4P56524 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.95□□□□□ -1.94
HDAC4P56524 RPL7P12-201ENST00000446719 750 ntBASIC2.95□□□□□ -1.94
HDAC4P56524 HMGN2P10-201ENST00000448085 265 ntBASIC2.95□□□□□ -1.94
HDAC4P56524 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.95□□□□□ -1.94
HDAC4P56524 RNU6-826P-201ENST00000516827 104 ntBASIC2.95□□□□□ -1.94
HDAC4P56524 RNU6-1088P-201ENST00000516850 104 ntBASIC2.95□□□□□ -1.94
HDAC4P56524 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.95□□□□□ -1.94
HDAC4P56524 AC087241.2-201ENST00000535801 324 ntBASIC2.95□□□□□ -1.94
HDAC4P56524 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.95□□□□□ -1.94
HDAC4P56524 LINC00933-203ENST00000559812 219 ntBASIC2.95□□□□□ -1.94
HDAC4P56524 AC024153.1-201ENST00000603103 365 ntBASIC2.95□□□□□ -1.94
HDAC4P56524 APOOP1-201ENST00000604695 592 ntBASIC2.95□□□□□ -1.94
HDAC4P56524 LARP7P1-201ENST00000605576 316 ntBASIC2.95□□□□□ -1.94
HDAC4P56524 AL008636.1-201ENST00000625038 1018 ntBASIC2.95□□□□□ -1.94
HDAC4P56524 MIR3199-2-201ENST00000636243 86 ntBASIC2.95□□□□□ -1.94
HDAC4P56524 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.95□□□□□ -1.94
HDAC4P56524 AC092593.1-201ENST00000515413 1815 ntBASIC2.95□□□□□ -1.94
HDAC4P56524 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HDAC4P56524 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.95□□□□□ -1.94
HDAC4P56524 AC026241.1-201ENST00000517873 2142 ntBASIC2.95□□□□□ -1.94
HDAC4P56524 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HDAC4P56524 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
HDAC4P56524 AC138393.1-203ENST00000327086 343 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 Y_RNA.166-201ENST00000363730 102 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 Y_RNA.301-201ENST00000364990 103 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 Y_RNA.324-201ENST00000365165 102 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 AL445529.1-201ENST00000398713 389 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 RNU2-25P-201ENST00000411041 191 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 AC023141.4-201ENST00000412031 328 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 MTND3P8-201ENST00000412909 339 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 AC009161.1-201ENST00000417306 376 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 PGBD4P6-201ENST00000421501 610 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.94□□□□□ -1.94
HDAC4P56524 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.94□□□□□ -1.94
HDAC4P56524 AC008571.1-201ENST00000467232 300 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 AC003982.1-202ENST00000469928 248 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.94□□□□□ -1.94
HDAC4P56524 RPS27AP9-201ENST00000477681 438 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 AC114781.4-201ENST00000513707 639 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 SNORA19.2-201ENST00000516013 114 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 RNU6-864P-201ENST00000516256 108 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.94□□□□□ -1.94
HDAC4P56524 CYCSP27-201ENST00000527643 293 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.94□□□□□ -1.94
HDAC4P56524 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.94□□□□□ -1.94
HDAC4P56524 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.94□□□□□ -1.94
HDAC4P56524 AC026464.5-201ENST00000562497 722 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.94□□□□□ -1.94
HDAC4P56524 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.94□□□□□ -1.94
HDAC4P56524 MIR3672-201ENST00000584290 82 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 AC087045.1-201ENST00000605856 382 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 MIR6134-201ENST00000617606 109 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.94□□□□□ -1.94
HDAC4P56524 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.94□□□□□ -1.94
HDAC4P56524 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.94□□□□□ -1.94
HDAC4P56524 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.94□□□□□ -1.94
HDAC4P56524 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HDAC4P56524 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HDAC4P56524 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HDAC4P56524 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.93□□□□□ -1.94
HDAC4P56524 RPL9P7-201ENST00000330965 580 ntBASIC2.93□□□□□ -1.94
HDAC4P56524 MIR449A-201ENST00000362113 91 ntBASIC2.93□□□□□ -1.94
HDAC4P56524 Y_RNA.184-201ENST00000363884 108 ntBASIC2.93□□□□□ -1.94
HDAC4P56524 RNU6-898P-201ENST00000365627 104 ntBASIC2.93□□□□□ -1.94
HDAC4P56524 AC096649.2-201ENST00000416186 393 ntBASIC2.93□□□□□ -1.94
HDAC4P56524 AC016831.2-201ENST00000417179 352 ntBASIC2.93□□□□□ -1.94
HDAC4P56524 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.93□□□□□ -1.94
HDAC4P56524 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.93□□□□□ -1.94
HDAC4P56524 SNRPEP8-201ENST00000442866 260 ntBASIC2.93□□□□□ -1.94
HDAC4P56524 AL135938.1-201ENST00000443141 297 ntBASIC2.93□□□□□ -1.94
HDAC4P56524 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.93□□□□□ -1.94
HDAC4P56524 AC091826.1-201ENST00000514065 313 ntBASIC2.93□□□□□ -1.94
HDAC4P56524 AC046134.1-201ENST00000514454 666 ntBASIC2.93□□□□□ -1.94
HDAC4P56524 RN7SKP256-201ENST00000517201 314 ntBASIC2.93□□□□□ -1.94
HDAC4P56524 AC069113.1-201ENST00000517763 267 ntBASIC2.93□□□□□ -1.94
HDAC4P56524 AC243972.3-201ENST00000539655 198 ntBASIC2.93□□□□□ -1.94
HDAC4P56524 AP000763.2-201ENST00000540641 163 ntBASIC2.93□□□□□ -1.94
HDAC4P56524 AC006199.1-201ENST00000548728 219 ntBASIC2.93□□□□□ -1.94
HDAC4P56524 AC021739.1-201ENST00000559631 174 ntBASIC2.93□□□□□ -1.94
HDAC4P56524 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.93□□□□□ -1.94
HDAC4P56524 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HDAC4P56524 AC091135.1-201ENST00000585943 307 ntBASIC2.93□□□□□ -1.94
HDAC4P56524 AC010378.1-201ENST00000619270 362 ntBASIC2.93□□□□□ -1.94
HDAC4P56524 AL137790.1-201ENST00000634283 177 ntBASIC2.93□□□□□ -1.94
HDAC4P56524 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
HDAC4P56524 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
HDAC4P56524 CDC27P3-201ENST00000635418 1910 ntBASIC2.93□□□□□ -1.94
HDAC4P56524 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.93□□□□□ -1.94
HDAC4P56524 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
HDAC4P56524 RNU6-750P-201ENST00000390946 107 ntBASIC2.92□□□□□ -1.94
HDAC4P56524 AL356432.1-201ENST00000405809 419 ntBASIC2.92□□□□□ -1.94
HDAC4P56524 RAP1BP3-201ENST00000407180 549 ntBASIC2.92□□□□□ -1.94
HDAC4P56524 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.92□□□□□ -1.94
HDAC4P56524 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms