Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 RNA5SP338-201ENST00000410495 85 ntBASIC1.98□□□□□ -2.09
LIM2P55344 RN7SKP192-201ENST00000411291 327 ntBASIC1.98□□□□□ -2.09
LIM2P55344 AL663109.1-201ENST00000411498 844 ntBASIC1.98□□□□□ -2.09
LIM2P55344 MTCO2P19-201ENST00000427513 598 ntBASIC1.98□□□□□ -2.09
LIM2P55344 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.98□□□□□ -2.09
LIM2P55344 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.98□□□□□ -2.09
LIM2P55344 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.98□□□□□ -2.09
LIM2P55344 RNU6-717P-201ENST00000459076 104 ntBASIC1.98□□□□□ -2.09
LIM2P55344 snoU13.14-201ENST00000459372 104 ntBASIC1.98□□□□□ -2.09
LIM2P55344 TRBV12-1-201ENST00000479785 344 ntBASIC1.98□□□□□ -2.09
LIM2P55344 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.98□□□□□ -2.09
LIM2P55344 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.98□□□□□ -2.09
LIM2P55344 AC105313.1-201ENST00000509121 353 ntBASIC1.98□□□□□ -2.09
LIM2P55344 AF213884.2-201ENST00000510417 903 ntBASIC1.98□□□□□ -2.09
LIM2P55344 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.98□□□□□ -2.09
LIM2P55344 RNU6-405P-201ENST00000516637 110 ntBASIC1.98□□□□□ -2.09
LIM2P55344 RN7SKP219-201ENST00000516825 296 ntBASIC1.98□□□□□ -2.09
LIM2P55344 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.98□□□□□ -2.09
LIM2P55344 AP005902.1-201ENST00000521358 186 ntBASIC1.98□□□□□ -2.09
LIM2P55344 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.98□□□□□ -2.09
LIM2P55344 AL137161.1-201ENST00000532231 390 ntBASIC1.98□□□□□ -2.09
LIM2P55344 AC024909.2-201ENST00000553035 286 ntBASIC1.98□□□□□ -2.09
LIM2P55344 AC090897.2-201ENST00000581715 130 ntBASIC1.98□□□□□ -2.09
LIM2P55344 MIR5194-201ENST00000582634 120 ntBASIC1.98□□□□□ -2.09
LIM2P55344 AC008536.2-201ENST00000607284 349 ntBASIC1.98□□□□□ -2.09
LIM2P55344 AC017083.3-201ENST00000609955 700 ntBASIC1.98□□□□□ -2.09
LIM2P55344 AL031601.2-202ENST00000622650 282 ntBASIC1.98□□□□□ -2.09
LIM2P55344 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LIM2P55344 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.97□□□□□ -2.09
LIM2P55344 Y_RNA.51-201ENST00000362725 102 ntBASIC1.97□□□□□ -2.09
LIM2P55344 RNU1-72P-201ENST00000362976 153 ntBASIC1.97□□□□□ -2.09
LIM2P55344 RNA5SP160-201ENST00000364866 120 ntBASIC1.97□□□□□ -2.09
LIM2P55344 RNU1-52P-201ENST00000384190 164 ntBASIC1.97□□□□□ -2.09
LIM2P55344 SNORA67.3-201ENST00000384366 140 ntBASIC1.97□□□□□ -2.09
LIM2P55344 SNORD116-20-201ENST00000384529 92 ntBASIC1.97□□□□□ -2.09
LIM2P55344 RNU6-1127P-201ENST00000384580 107 ntBASIC1.97□□□□□ -2.09
LIM2P55344 AC074117.2-201ENST00000417130 397 ntBASIC1.97□□□□□ -2.09
LIM2P55344 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.97□□□□□ -2.09
LIM2P55344 AC002486.1-201ENST00000435098 391 ntBASIC1.97□□□□□ -2.09
LIM2P55344 AL021397.1-201ENST00000451806 248 ntBASIC1.97□□□□□ -2.09
LIM2P55344 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.97□□□□□ -2.09
LIM2P55344 SNRPFP3-201ENST00000457792 225 ntBASIC1.97□□□□□ -2.09
LIM2P55344 TPT1P7-201ENST00000458300 517 ntBASIC1.97□□□□□ -2.09
LIM2P55344 RNU7-63P-201ENST00000459054 62 ntBASIC1.97□□□□□ -2.09
LIM2P55344 snoU109.2-201ENST00000459316 135 ntBASIC1.97□□□□□ -2.09
LIM2P55344 AC112771.1-201ENST00000463581 102 ntBASIC1.97□□□□□ -2.09
LIM2P55344 AP001025.1-201ENST00000486139 332 ntBASIC1.97□□□□□ -2.09
LIM2P55344 AC090255.1-201ENST00000495779 349 ntBASIC1.97□□□□□ -2.09
LIM2P55344 AC092436.1-201ENST00000506450 503 ntBASIC1.97□□□□□ -2.09
LIM2P55344 MTCYBP40-201ENST00000509390 1135 ntBASIC1.97□□□□□ -2.09
LIM2P55344 SMURF2P1-201ENST00000514992 481 ntBASIC1.97□□□□□ -2.09
LIM2P55344 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.97□□□□□ -2.09
LIM2P55344 RNU6-1178P-201ENST00000516674 107 ntBASIC1.97□□□□□ -2.09
LIM2P55344 SNORA31.23-201ENST00000517219 133 ntBASIC1.97□□□□□ -2.09
LIM2P55344 AC109479.2-201ENST00000517842 174 ntBASIC1.97□□□□□ -2.09
LIM2P55344 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.97□□□□□ -2.09
LIM2P55344 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.97□□□□□ -2.09
LIM2P55344 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.97□□□□□ -2.09
LIM2P55344 AC087683.1-201ENST00000591187 441 ntBASIC1.97□□□□□ -2.09
LIM2P55344 AC073410.2-201ENST00000603240 332 ntBASIC1.97□□□□□ -2.09
LIM2P55344 AL391646.1-201ENST00000603860 190 ntBASIC1.97□□□□□ -2.09
LIM2P55344 AC048344.4-201ENST00000619744 527 ntBASIC1.97□□□□□ -2.09
LIM2P55344 MIR219B-201ENST00000637023 88 ntBASIC1.97□□□□□ -2.09
LIM2P55344 AC002543.1-201ENST00000299783 1954 ntBASIC1.97□□□□□ -2.09
LIM2P55344 MTND4P14-201ENST00000435799 1354 ntBASIC1.97□□□□□ -2.09
LIM2P55344 Y_RNA.1-201ENST00000352915 104 ntBASIC1.96□□□□□ -2.1
LIM2P55344 RNU6-552P-201ENST00000362869 119 ntBASIC1.96□□□□□ -2.1
LIM2P55344 RNU6-78P-201ENST00000362897 107 ntBASIC1.96□□□□□ -2.1
LIM2P55344 U8.2-201ENST00000363156 134 ntBASIC1.96□□□□□ -2.1
LIM2P55344 SNORA67.1-201ENST00000364749 141 ntBASIC1.96□□□□□ -2.1
LIM2P55344 RNU5E-7P-201ENST00000365290 117 ntBASIC1.96□□□□□ -2.1
LIM2P55344 RNA5SP37-201ENST00000365420 130 ntBASIC1.96□□□□□ -2.1
LIM2P55344 RNU6-903P-201ENST00000391270 109 ntBASIC1.96□□□□□ -2.1
LIM2P55344 RNU2-9P-201ENST00000410194 145 ntBASIC1.96□□□□□ -2.1
LIM2P55344 HMGB3P2-201ENST00000411913 584 ntBASIC1.96□□□□□ -2.1
LIM2P55344 UBE2V1P10-201ENST00000414685 269 ntBASIC1.96□□□□□ -2.1
LIM2P55344 MTND1P23-201ENST00000416931 372 ntBASIC1.96□□□□□ -2.1
LIM2P55344 CYCSP48-201ENST00000417124 323 ntBASIC1.96□□□□□ -2.1
LIM2P55344 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.96□□□□□ -2.1
LIM2P55344 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.96□□□□□ -2.1
LIM2P55344 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.96□□□□□ -2.1
LIM2P55344 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.96□□□□□ -2.1
LIM2P55344 DYNLL1P5-201ENST00000467158 270 ntBASIC1.96□□□□□ -2.1
LIM2P55344 AC006512.1-201ENST00000468816 291 ntBASIC1.96□□□□□ -2.1
LIM2P55344 AP000852.1-201ENST00000472460 573 ntBASIC1.96□□□□□ -2.1
LIM2P55344 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.96□□□□□ -2.1
LIM2P55344 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.96□□□□□ -2.1
LIM2P55344 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.96□□□□□ -2.1
LIM2P55344 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.96□□□□□ -2.1
LIM2P55344 AC135279.1-201ENST00000543493 504 ntBASIC1.96□□□□□ -2.1
LIM2P55344 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.96□□□□□ -2.1
LIM2P55344 BNIP3P6-201ENST00000549284 499 ntBASIC1.96□□□□□ -2.1
LIM2P55344 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.96□□□□□ -2.1
LIM2P55344 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.96□□□□□ -2.1
LIM2P55344 AL138963.2-201ENST00000605137 226 ntBASIC1.96□□□□□ -2.1
LIM2P55344 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.96□□□□□ -2.1
LIM2P55344 AC093788.1-201ENST00000609356 927 ntBASIC1.96□□□□□ -2.1
LIM2P55344 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.96□□□□□ -2.1
LIM2P55344 AC009233.1-201ENST00000616477 371 ntBASIC1.96□□□□□ -2.1
LIM2P55344 AC008121.3-201ENST00000618726 433 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms