Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC012119.1-201ENST00000603184 222 ntBASIC2.89□□□□□ -1.95
CLCN3P51790 AL121757.2-201ENST00000611223 313 ntBASIC2.89□□□□□ -1.95
CLCN3P51790 uc_338.5-201ENST00000611839 155 ntBASIC2.89□□□□□ -1.95
CLCN3P51790 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.89□□□□□ -1.95
CLCN3P51790 AL133216.2-202ENST00000634512 349 ntBASIC2.89□□□□□ -1.95
CLCN3P51790 TPTEP1-208ENST00000636884 213 ntBASIC2.89□□□□□ -1.95
CLCN3P51790 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLCN3P51790 AC108206.1-201ENST00000570186 4159 ntBASIC2.89□□□□□ -1.95
CLCN3P51790 ADAM3A-203ENST00000461344 2157 ntBASIC2.88□□□□□ -1.95
CLCN3P51790 MTND4P29-201ENST00000503122 1372 ntBASIC2.88□□□□□ -1.95
CLCN3P51790 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.88□□□□□ -1.95
CLCN3P51790 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.88□□□□□ -1.95
CLCN3P51790 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
CLCN3P51790 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLCN3P51790 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.88□□□□□ -1.95
CLCN3P51790 SNORD3E-201ENST00000362899 217 ntBASIC2.88□□□□□ -1.95
CLCN3P51790 Y_RNA.212-201ENST00000364177 102 ntBASIC2.88□□□□□ -1.95
CLCN3P51790 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLCN3P51790 RNU6-301P-201ENST00000384277 107 ntBASIC2.88□□□□□ -1.95
CLCN3P51790 RNU2-3P-201ENST00000410144 191 ntBASIC2.88□□□□□ -1.95
CLCN3P51790 POLHP1-201ENST00000411806 470 ntBASIC2.88□□□□□ -1.95
CLCN3P51790 BX682237.1-201ENST00000415016 335 ntBASIC2.88□□□□□ -1.95
CLCN3P51790 RPLP0P7-201ENST00000416050 667 ntBASIC2.88□□□□□ -1.95
CLCN3P51790 RPL7P10-201ENST00000417407 739 ntBASIC2.88□□□□□ -1.95
CLCN3P51790 AL365400.1-201ENST00000431854 640 ntBASIC2.88□□□□□ -1.95
CLCN3P51790 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.88□□□□□ -1.95
CLCN3P51790 RNU7-167P-201ENST00000459160 62 ntBASIC2.88□□□□□ -1.95
CLCN3P51790 MTND3P25-201ENST00000509243 135 ntBASIC2.88□□□□□ -1.95
CLCN3P51790 AC113155.1-201ENST00000511141 769 ntBASIC2.88□□□□□ -1.95
CLCN3P51790 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.88□□□□□ -1.95
CLCN3P51790 AC006199.1-201ENST00000548728 219 ntBASIC2.88□□□□□ -1.95
CLCN3P51790 AC027176.1-201ENST00000560204 514 ntBASIC2.88□□□□□ -1.95
CLCN3P51790 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.88□□□□□ -1.95
CLCN3P51790 Z82243.1-201ENST00000609432 473 ntBASIC2.88□□□□□ -1.95
CLCN3P51790 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLCN3P51790 U2.17-201ENST00000611454 95 ntBASIC2.88□□□□□ -1.95
CLCN3P51790 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.88□□□□□ -1.95
CLCN3P51790 ZNF519P1-201ENST00000449011 1626 ntBASIC2.88□□□□□ -1.95
CLCN3P51790 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLCN3P51790 AC006026.1-201ENST00000444025 1803 ntBASIC2.87□□□□□ -1.95
CLCN3P51790 RNU4-79P-201ENST00000362764 141 ntBASIC2.87□□□□□ -1.95
CLCN3P51790 RNU6-384P-201ENST00000364900 104 ntBASIC2.87□□□□□ -1.95
CLCN3P51790 Y_RNA.339-201ENST00000365325 102 ntBASIC2.87□□□□□ -1.95
CLCN3P51790 Y_RNA.356-201ENST00000365475 113 ntBASIC2.87□□□□□ -1.95
CLCN3P51790 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.87□□□□□ -1.95
CLCN3P51790 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.87□□□□□ -1.95
CLCN3P51790 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.87□□□□□ -1.95
CLCN3P51790 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.87□□□□□ -1.95
CLCN3P51790 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.87□□□□□ -1.95
CLCN3P51790 HMGB1P18-201ENST00000438801 619 ntBASIC2.87□□□□□ -1.95
CLCN3P51790 AL513328.1-201ENST00000446460 224 ntBASIC2.87□□□□□ -1.95
CLCN3P51790 DYNLL1P5-201ENST00000467158 270 ntBASIC2.87□□□□□ -1.95
CLCN3P51790 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.87□□□□□ -1.95
CLCN3P51790 AC083904.1-201ENST00000487828 231 ntBASIC2.87□□□□□ -1.95
CLCN3P51790 RNU1-86P-201ENST00000516108 154 ntBASIC2.87□□□□□ -1.95
CLCN3P51790 RNU1-107P-201ENST00000516617 154 ntBASIC2.87□□□□□ -1.95
CLCN3P51790 AC093027.1-201ENST00000546698 429 ntBASIC2.87□□□□□ -1.95
CLCN3P51790 MIR4795-201ENST00000584182 89 ntBASIC2.87□□□□□ -1.95
CLCN3P51790 MIR3942-201ENST00000585264 109 ntBASIC2.87□□□□□ -1.95
CLCN3P51790 AL022345.1-201ENST00000607292 135 ntBASIC2.87□□□□□ -1.95
CLCN3P51790 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.87□□□□□ -1.95
CLCN3P51790 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CLCN3P51790 AL031601.2-202ENST00000622650 282 ntBASIC2.87□□□□□ -1.95
CLCN3P51790 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.87□□□□□ -1.95
CLCN3P51790 FAM35CP-201ENST00000554755 2470 ntBASIC2.87□□□□□ -1.95
CLCN3P51790 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CLCN3P51790 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CLCN3P51790 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.86□□□□□ -1.95
CLCN3P51790 SNORA32.2-201ENST00000384049 122 ntBASIC2.86□□□□□ -1.95
CLCN3P51790 MIR10A-201ENST00000385043 110 ntBASIC2.86□□□□□ -1.95
CLCN3P51790 U3.37-201ENST00000408528 213 ntBASIC2.86□□□□□ -1.95
CLCN3P51790 CYCSP33-201ENST00000414485 327 ntBASIC2.86□□□□□ -1.95
CLCN3P51790 AC009963.1-201ENST00000417265 157 ntBASIC2.86□□□□□ -1.95
CLCN3P51790 AL358075.3-201ENST00000426289 226 ntBASIC2.86□□□□□ -1.95
CLCN3P51790 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.86□□□□□ -1.95
CLCN3P51790 MTND1P14-201ENST00000427400 950 ntBASIC2.86□□□□□ -1.95
CLCN3P51790 NDUFA5P4-201ENST00000436704 385 ntBASIC2.86□□□□□ -1.95
CLCN3P51790 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.86□□□□□ -1.95
CLCN3P51790 SNORA19.2-201ENST00000516013 114 ntBASIC2.86□□□□□ -1.95
CLCN3P51790 RNU6-189P-201ENST00000516120 101 ntBASIC2.86□□□□□ -1.95
CLCN3P51790 RNA5SP320-201ENST00000516263 124 ntBASIC2.86□□□□□ -1.95
CLCN3P51790 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.86□□□□□ -1.95
CLCN3P51790 AP000889.2-201ENST00000532684 490 ntBASIC2.86□□□□□ -1.95
CLCN3P51790 AC026464.5-201ENST00000562497 722 ntBASIC2.86□□□□□ -1.95
CLCN3P51790 AC007151.1-201ENST00000572774 483 ntBASIC2.86□□□□□ -1.95
CLCN3P51790 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.86□□□□□ -1.95
CLCN3P51790 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.86□□□□□ -1.95
CLCN3P51790 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.86□□□□□ -1.95
CLCN3P51790 FAM157A-202ENST00000615155 405 ntBASIC2.86□□□□□ -1.95
CLCN3P51790 SCARNA4-202ENST00000625402 129 ntBASIC2.86□□□□□ -1.95
CLCN3P51790 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.86□□□□□ -1.95
CLCN3P51790 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CLCN3P51790 AC010889.1-201ENST00000566193 2666 ntBASIC2.85□□□□□ -1.95
CLCN3P51790 RNU6-254P-201ENST00000363377 107 ntBASIC2.85□□□□□ -1.95
CLCN3P51790 Y_RNA.135-201ENST00000363439 95 ntBASIC2.85□□□□□ -1.95
CLCN3P51790 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CLCN3P51790 EIF4E2P1-201ENST00000393781 255 ntBASIC2.85□□□□□ -1.95
CLCN3P51790 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.85□□□□□ -1.95
CLCN3P51790 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.85□□□□□ -1.95
CLCN3P51790 NCOR1P3-201ENST00000420479 303 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms