Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RNU6-702P-201ENST00000364982 107 ntBASIC3.88□□□□□ -1.79
MRE11P49959 Y_RNA.574-201ENST00000384766 95 ntBASIC3.88□□□□□ -1.79
MRE11P49959 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.88□□□□□ -1.79
MRE11P49959 AL133396.1-201ENST00000432048 687 ntBASIC3.88□□□□□ -1.79
MRE11P49959 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.88□□□□□ -1.79
MRE11P49959 AC025750.2-201ENST00000442609 450 ntBASIC3.88□□□□□ -1.79
MRE11P49959 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.88□□□□□ -1.79
MRE11P49959 PCMTD1P1-201ENST00000455560 355 ntBASIC3.88□□□□□ -1.79
MRE11P49959 RPS20P22-201ENST00000473700 357 ntBASIC3.88□□□□□ -1.79
MRE11P49959 AC068781.1-201ENST00000488231 618 ntBASIC3.88□□□□□ -1.79
MRE11P49959 AL049874.1-201ENST00000489560 388 ntBASIC3.88□□□□□ -1.79
MRE11P49959 AC018437.1-201ENST00000492214 406 ntBASIC3.88□□□□□ -1.79
MRE11P49959 AC022493.1-201ENST00000492984 337 ntBASIC3.88□□□□□ -1.79
MRE11P49959 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.88□□□□□ -1.79
MRE11P49959 RNU6-1315P-201ENST00000517187 99 ntBASIC3.88□□□□□ -1.79
MRE11P49959 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.88□□□□□ -1.79
MRE11P49959 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.88□□□□□ -1.79
MRE11P49959 MIR4474-201ENST00000579189 78 ntBASIC3.88□□□□□ -1.79
MRE11P49959 AL355598.1-201ENST00000604169 202 ntBASIC3.88□□□□□ -1.79
MRE11P49959 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MRE11P49959 AC118273.1-201ENST00000525324 3006 ntBASIC3.88□□□□□ -1.79
MRE11P49959 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
MRE11P49959 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
MRE11P49959 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
MRE11P49959 OR4G2P-202ENST00000641004 1759 ntBASIC3.87□□□□□ -1.79
MRE11P49959 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
MRE11P49959 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
MRE11P49959 RNU6-173P-201ENST00000364215 104 ntBASIC3.87□□□□□ -1.79
MRE11P49959 Y_RNA.324-201ENST00000365165 102 ntBASIC3.87□□□□□ -1.79
MRE11P49959 Y_RNA.485-201ENST00000384395 102 ntBASIC3.87□□□□□ -1.79
MRE11P49959 RNU6-1179P-201ENST00000384667 107 ntBASIC3.87□□□□□ -1.79
MRE11P49959 SNORA46-201ENST00000384762 135 ntBASIC3.87□□□□□ -1.79
MRE11P49959 MIR514A1-201ENST00000385133 98 ntBASIC3.87□□□□□ -1.79
MRE11P49959 MT-TG-201ENST00000387429 68 ntBASIC3.87□□□□□ -1.79
MRE11P49959 AL445529.1-201ENST00000398713 389 ntBASIC3.87□□□□□ -1.79
MRE11P49959 Y_RNA.618-201ENST00000410949 107 ntBASIC3.87□□□□□ -1.79
MRE11P49959 RN7SKP58-201ENST00000411010 305 ntBASIC3.87□□□□□ -1.79
MRE11P49959 ATP5A1P2-201ENST00000412323 255 ntBASIC3.87□□□□□ -1.79
MRE11P49959 TOMM22P1-201ENST00000418578 312 ntBASIC3.87□□□□□ -1.79
MRE11P49959 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.87□□□□□ -1.79
MRE11P49959 DPH3P2-201ENST00000422618 250 ntBASIC3.87□□□□□ -1.79
MRE11P49959 MRPS18CP6-201ENST00000423587 223 ntBASIC3.87□□□□□ -1.79
MRE11P49959 AC099799.1-201ENST00000439809 192 ntBASIC3.87□□□□□ -1.79
MRE11P49959 U8.20-201ENST00000459445 131 ntBASIC3.87□□□□□ -1.79
MRE11P49959 AC110794.1-201ENST00000505816 425 ntBASIC3.87□□□□□ -1.79
MRE11P49959 AC010265.1-201ENST00000513509 211 ntBASIC3.87□□□□□ -1.79
MRE11P49959 RNU6-475P-201ENST00000516073 104 ntBASIC3.87□□□□□ -1.79
MRE11P49959 RNU1-86P-201ENST00000516108 154 ntBASIC3.87□□□□□ -1.79
MRE11P49959 RNU1-107P-201ENST00000516617 154 ntBASIC3.87□□□□□ -1.79
MRE11P49959 RNU6-635P-201ENST00000516651 102 ntBASIC3.87□□□□□ -1.79
MRE11P49959 RNU4-77P-201ENST00000516692 156 ntBASIC3.87□□□□□ -1.79
MRE11P49959 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.87□□□□□ -1.79
MRE11P49959 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.87□□□□□ -1.79
MRE11P49959 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.87□□□□□ -1.79
MRE11P49959 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.87□□□□□ -1.79
MRE11P49959 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.87□□□□□ -1.79
MRE11P49959 SUB1P3-201ENST00000564581 315 ntBASIC3.87□□□□□ -1.79
MRE11P49959 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.87□□□□□ -1.79
MRE11P49959 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
MRE11P49959 MIR1273C-201ENST00000578669 77 ntBASIC3.87□□□□□ -1.79
MRE11P49959 AC098826.3-201ENST00000603823 466 ntBASIC3.87□□□□□ -1.79
MRE11P49959 AC018889.1-201ENST00000605372 397 ntBASIC3.87□□□□□ -1.79
MRE11P49959 SNORD58B-201ENST00000607313 66 ntBASIC3.87□□□□□ -1.79
MRE11P49959 SNORD39.4-201ENST00000620099 78 ntBASIC3.87□□□□□ -1.79
MRE11P49959 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.87□□□□□ -1.79
MRE11P49959 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
MRE11P49959 AC091812.1-201ENST00000432235 1948 ntBASIC3.86□□□□□ -1.79
MRE11P49959 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
MRE11P49959 RNU6-1167P-201ENST00000363227 94 ntBASIC3.86□□□□□ -1.79
MRE11P49959 RNU6-1318P-201ENST00000365389 103 ntBASIC3.86□□□□□ -1.79
MRE11P49959 Y_RNA.389-201ENST00000383924 113 ntBASIC3.86□□□□□ -1.79
MRE11P49959 RNU2-23P-201ENST00000410545 195 ntBASIC3.86□□□□□ -1.79
MRE11P49959 RNA5SP247-201ENST00000411181 105 ntBASIC3.86□□□□□ -1.79
MRE11P49959 AL030996.1-201ENST00000411430 235 ntBASIC3.86□□□□□ -1.79
MRE11P49959 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.86□□□□□ -1.79
MRE11P49959 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.86□□□□□ -1.79
MRE11P49959 RPS24P13-201ENST00000442520 397 ntBASIC3.86□□□□□ -1.79
MRE11P49959 UQCRHP3-201ENST00000451503 251 ntBASIC3.86□□□□□ -1.79
MRE11P49959 AC008571.1-201ENST00000467232 300 ntBASIC3.86□□□□□ -1.79
MRE11P49959 MLLT10P2-201ENST00000506434 249 ntBASIC3.86□□□□□ -1.79
MRE11P49959 Y_RNA.721-201ENST00000517207 102 ntBASIC3.86□□□□□ -1.79
MRE11P49959 RNU6-794P-201ENST00000517261 64 ntBASIC3.86□□□□□ -1.79
MRE11P49959 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.86□□□□□ -1.79
MRE11P49959 AL157871.3-201ENST00000557231 293 ntBASIC3.86□□□□□ -1.79
MRE11P49959 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.86□□□□□ -1.79
MRE11P49959 AC002545.1-201ENST00000592511 181 ntBASIC3.86□□□□□ -1.79
MRE11P49959 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.86□□□□□ -1.79
MRE11P49959 MIR7112-201ENST00000616126 65 ntBASIC3.86□□□□□ -1.79
MRE11P49959 RMST_4.1-201ENST00000616886 107 ntBASIC3.86□□□□□ -1.79
MRE11P49959 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.86□□□□□ -1.79
MRE11P49959 AL606534.2-204ENST00000635008 178 ntBASIC3.86□□□□□ -1.79
MRE11P49959 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
MRE11P49959 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.86□□□□□ -1.79
MRE11P49959 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
MRE11P49959 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
MRE11P49959 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
MRE11P49959 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.85□□□□□ -1.79
MRE11P49959 RNA5SP374-201ENST00000362939 125 ntBASIC3.85□□□□□ -1.79
MRE11P49959 RNU6-450P-201ENST00000364654 107 ntBASIC3.85□□□□□ -1.79
MRE11P49959 RNU6-596P-201ENST00000365395 98 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms