Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 YWHAEP7-203ENST00000622054 312 ntBASIC1.76□□□□□ -2.13
RFX3P48380 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.76□□□□□ -2.13
RFX3P48380 FARSBP1-201ENST00000435808 1778 ntBASIC1.76□□□□□ -2.13
RFX3P48380 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.76□□□□□ -2.13
RFX3P48380 RNU6-371P-201ENST00000364283 108 ntBASIC1.75□□□□□ -2.13
RFX3P48380 RNU4-91P-201ENST00000364778 135 ntBASIC1.75□□□□□ -2.13
RFX3P48380 RAP1BP3-201ENST00000407180 549 ntBASIC1.75□□□□□ -2.13
RFX3P48380 HMGN1P14-201ENST00000412459 517 ntBASIC1.75□□□□□ -2.13
RFX3P48380 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RFX3P48380 AL031779.1-201ENST00000415663 330 ntBASIC1.75□□□□□ -2.13
RFX3P48380 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.75□□□□□ -2.13
RFX3P48380 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.75□□□□□ -2.13
RFX3P48380 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.75□□□□□ -2.13
RFX3P48380 CYCSP46-201ENST00000423569 204 ntBASIC1.75□□□□□ -2.13
RFX3P48380 AL365400.1-201ENST00000431854 640 ntBASIC1.75□□□□□ -2.13
RFX3P48380 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.75□□□□□ -2.13
RFX3P48380 DNAJC19P4-201ENST00000440115 345 ntBASIC1.75□□□□□ -2.13
RFX3P48380 CALM1P1-201ENST00000442082 433 ntBASIC1.75□□□□□ -2.13
RFX3P48380 AC079781.2-201ENST00000446424 169 ntBASIC1.75□□□□□ -2.13
RFX3P48380 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RFX3P48380 AL137159.1-201ENST00000452808 512 ntBASIC1.75□□□□□ -2.13
RFX3P48380 ART2BP-201ENST00000453501 499 ntBASIC1.75□□□□□ -2.13
RFX3P48380 AL033528.1-201ENST00000453780 140 ntBASIC1.75□□□□□ -2.13
RFX3P48380 AP001025.1-201ENST00000486139 332 ntBASIC1.75□□□□□ -2.13
RFX3P48380 MTCYBP35-201ENST00000503630 1137 ntBASIC1.75□□□□□ -2.13
RFX3P48380 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.75□□□□□ -2.13
RFX3P48380 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.75□□□□□ -2.13
RFX3P48380 MIR3915-201ENST00000578518 97 ntBASIC1.75□□□□□ -2.13
RFX3P48380 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.75□□□□□ -2.13
RFX3P48380 MIR548AB-201ENST00000584917 84 ntBASIC1.75□□□□□ -2.13
RFX3P48380 DEFB131E-202ENST00000602581 683 ntBASIC1.75□□□□□ -2.13
RFX3P48380 AC087683.2-201ENST00000611384 326 ntBASIC1.75□□□□□ -2.13
RFX3P48380 AL773524.1-201ENST00000614065 229 ntBASIC1.75□□□□□ -2.13
RFX3P48380 AP001506.1-201ENST00000615444 211 ntBASIC1.75□□□□□ -2.13
RFX3P48380 AC005296.1-201ENST00000616145 209 ntBASIC1.75□□□□□ -2.13
RFX3P48380 AC091304.6-201ENST00000619761 202 ntBASIC1.75□□□□□ -2.13
RFX3P48380 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
RFX3P48380 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
RFX3P48380 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.74□□□□□ -2.13
RFX3P48380 MIR578-201ENST00000384828 96 ntBASIC1.74□□□□□ -2.13
RFX3P48380 RNU6-482P-201ENST00000391068 107 ntBASIC1.74□□□□□ -2.13
RFX3P48380 RNA5SP111-201ENST00000411386 101 ntBASIC1.74□□□□□ -2.13
RFX3P48380 AL030996.1-201ENST00000411430 235 ntBASIC1.74□□□□□ -2.13
RFX3P48380 AC009961.2-201ENST00000435771 251 ntBASIC1.74□□□□□ -2.13
RFX3P48380 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.74□□□□□ -2.13
RFX3P48380 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.74□□□□□ -2.13
RFX3P48380 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.74□□□□□ -2.13
RFX3P48380 AC108210.2-201ENST00000503681 201 ntBASIC1.74□□□□□ -2.13
RFX3P48380 HMGB3P17-201ENST00000504195 649 ntBASIC1.74□□□□□ -2.13
RFX3P48380 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.74□□□□□ -2.13
RFX3P48380 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.74□□□□□ -2.13
RFX3P48380 AC091965.2-201ENST00000512324 613 ntBASIC1.74□□□□□ -2.13
RFX3P48380 SCARNA24.1-201ENST00000516465 137 ntBASIC1.74□□□□□ -2.13
RFX3P48380 RNU6-410P-201ENST00000517006 107 ntBASIC1.74□□□□□ -2.13
RFX3P48380 AC090572.1-201ENST00000519251 160 ntBASIC1.74□□□□□ -2.13
RFX3P48380 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.74□□□□□ -2.13
RFX3P48380 AC026271.5-201ENST00000577873 130 ntBASIC1.74□□□□□ -2.13
RFX3P48380 AC243960.4-201ENST00000600532 288 ntBASIC1.74□□□□□ -2.13
RFX3P48380 SNRPGP17-201ENST00000603780 214 ntBASIC1.74□□□□□ -2.13
RFX3P48380 AC090578.1-201ENST00000604955 591 ntBASIC1.74□□□□□ -2.13
RFX3P48380 AC008250.2-201ENST00000615261 205 ntBASIC1.74□□□□□ -2.13
RFX3P48380 AC007494.3-201ENST00000624660 743 ntBASIC1.74□□□□□ -2.13
RFX3P48380 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.74□□□□□ -2.13
RFX3P48380 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
RFX3P48380 Y_RNA.40-201ENST00000362645 93 ntBASIC1.73□□□□□ -2.13
RFX3P48380 SNORD115-3-201ENST00000363100 82 ntBASIC1.73□□□□□ -2.13
RFX3P48380 RNY4P34-201ENST00000364779 95 ntBASIC1.73□□□□□ -2.13
RFX3P48380 RNU6-622P-201ENST00000384272 103 ntBASIC1.73□□□□□ -2.13
RFX3P48380 RNU6-1274P-201ENST00000384557 107 ntBASIC1.73□□□□□ -2.13
RFX3P48380 SNORA40.3-201ENST00000390964 122 ntBASIC1.73□□□□□ -2.13
RFX3P48380 AL049545.1-201ENST00000401856 572 ntBASIC1.73□□□□□ -2.13
RFX3P48380 RNA5SP390-201ENST00000410191 113 ntBASIC1.73□□□□□ -2.13
RFX3P48380 EEF1A1P40-201ENST00000412883 573 ntBASIC1.73□□□□□ -2.13
RFX3P48380 AL158823.1-201ENST00000418441 478 ntBASIC1.73□□□□□ -2.13
RFX3P48380 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.73□□□□□ -2.13
RFX3P48380 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.73□□□□□ -2.13
RFX3P48380 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.73□□□□□ -2.13
RFX3P48380 MTCO3P5-201ENST00000433620 714 ntBASIC1.73□□□□□ -2.13
RFX3P48380 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.73□□□□□ -2.13
RFX3P48380 MTATP6P16-201ENST00000434543 526 ntBASIC1.73□□□□□ -2.13
RFX3P48380 AL360271.2-201ENST00000447710 161 ntBASIC1.73□□□□□ -2.13
RFX3P48380 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.73□□□□□ -2.13
RFX3P48380 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.73□□□□□ -2.13
RFX3P48380 RNA5SP269-201ENST00000459032 137 ntBASIC1.73□□□□□ -2.13
RFX3P48380 SNORD42A-201ENST00000459584 64 ntBASIC1.73□□□□□ -2.13
RFX3P48380 AC006512.1-201ENST00000468816 291 ntBASIC1.73□□□□□ -2.13
RFX3P48380 RBBP4P6-201ENST00000508098 202 ntBASIC1.73□□□□□ -2.13
RFX3P48380 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RFX3P48380 SNORA31.23-201ENST00000517219 133 ntBASIC1.73□□□□□ -2.13
RFX3P48380 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.73□□□□□ -2.13
RFX3P48380 AP003392.2-201ENST00000527269 208 ntBASIC1.73□□□□□ -2.13
RFX3P48380 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
RFX3P48380 LRRC34P1-201ENST00000542742 915 ntBASIC1.73□□□□□ -2.13
RFX3P48380 AC015712.3-201ENST00000559380 164 ntBASIC1.73□□□□□ -2.13
RFX3P48380 MIR4769-201ENST00000584126 77 ntBASIC1.73□□□□□ -2.13
RFX3P48380 AC012493.3-201ENST00000604494 112 ntBASIC1.73□□□□□ -2.13
RFX3P48380 AL359314.1-201ENST00000616913 261 ntBASIC1.73□□□□□ -2.13
RFX3P48380 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.73□□□□□ -2.13
RFX3P48380 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.73□□□□□ -2.13
RFX3P48380 AC008555.8-201ENST00000623602 2168 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms