Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC010653.1-201ENST00000571108 881 ntBASIC3.14□□□□□ -1.91
CIITAP33076 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.14□□□□□ -1.91
CIITAP33076 AL133255.1-201ENST00000606374 441 ntBASIC3.14□□□□□ -1.91
CIITAP33076 AL160413.1-201ENST00000622780 310 ntBASIC3.14□□□□□ -1.91
CIITAP33076 AC090574.1-201ENST00000623186 233 ntBASIC3.14□□□□□ -1.91
CIITAP33076 AC090617.7-201ENST00000623952 126 ntBASIC3.14□□□□□ -1.91
CIITAP33076 AC138627.2-201ENST00000624202 601 ntBASIC3.14□□□□□ -1.91
CIITAP33076 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CIITAP33076 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CIITAP33076 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.14□□□□□ -1.91
CIITAP33076 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CIITAP33076 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
CIITAP33076 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CIITAP33076 MIR181A2-201ENST00000384863 110 ntBASIC3.13□□□□□ -1.91
CIITAP33076 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CIITAP33076 SNORA40C-201ENST00000391285 128 ntBASIC3.13□□□□□ -1.91
CIITAP33076 MIR887-201ENST00000401258 79 ntBASIC3.13□□□□□ -1.91
CIITAP33076 AC074085.1-201ENST00000413598 418 ntBASIC3.13□□□□□ -1.91
CIITAP33076 AL354751.2-201ENST00000415471 210 ntBASIC3.13□□□□□ -1.91
CIITAP33076 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.13□□□□□ -1.91
CIITAP33076 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.13□□□□□ -1.91
CIITAP33076 AC104332.2-201ENST00000429959 156 ntBASIC3.13□□□□□ -1.91
CIITAP33076 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.13□□□□□ -1.91
CIITAP33076 AC092436.3-201ENST00000511788 257 ntBASIC3.13□□□□□ -1.91
CIITAP33076 RN7SKP24-201ENST00000515888 284 ntBASIC3.13□□□□□ -1.91
CIITAP33076 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.13□□□□□ -1.91
CIITAP33076 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
CIITAP33076 MIR4790-201ENST00000577799 79 ntBASIC3.13□□□□□ -1.91
CIITAP33076 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.13□□□□□ -1.91
CIITAP33076 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CIITAP33076 AC007742.2-201ENST00000618226 398 ntBASIC3.13□□□□□ -1.91
CIITAP33076 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.13□□□□□ -1.91
CIITAP33076 U2.21-201ENST00000637295 81 ntBASIC3.13□□□□□ -1.91
CIITAP33076 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CIITAP33076 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CIITAP33076 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.12□□□□□ -1.91
CIITAP33076 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
CIITAP33076 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.12□□□□□ -1.91
CIITAP33076 SNORD14B-201ENST00000364533 90 ntBASIC3.12□□□□□ -1.91
CIITAP33076 Y_RNA.324-201ENST00000365165 102 ntBASIC3.12□□□□□ -1.91
CIITAP33076 RNU6-166P-201ENST00000384371 107 ntBASIC3.12□□□□□ -1.91
CIITAP33076 MIR767-201ENST00000390228 109 ntBASIC3.12□□□□□ -1.91
CIITAP33076 RN7SKP123-201ENST00000410732 291 ntBASIC3.12□□□□□ -1.91
CIITAP33076 RNU6-1304P-201ENST00000411374 106 ntBASIC3.12□□□□□ -1.91
CIITAP33076 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.12□□□□□ -1.91
CIITAP33076 BMS1P22-201ENST00000414726 313 ntBASIC3.12□□□□□ -1.91
CIITAP33076 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.12□□□□□ -1.91
CIITAP33076 AL139281.1-201ENST00000422120 335 ntBASIC3.12□□□□□ -1.91
CIITAP33076 HMGB1P9-201ENST00000429856 646 ntBASIC3.12□□□□□ -1.91
CIITAP33076 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.12□□□□□ -1.91
CIITAP33076 AC112220.1-201ENST00000434628 355 ntBASIC3.12□□□□□ -1.91
CIITAP33076 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.12□□□□□ -1.91
CIITAP33076 SNRPEP9-201ENST00000436794 238 ntBASIC3.12□□□□□ -1.91
CIITAP33076 NDUFB1P2-201ENST00000449477 176 ntBASIC3.12□□□□□ -1.91
CIITAP33076 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.12□□□□□ -1.91
CIITAP33076 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.12□□□□□ -1.91
CIITAP33076 RNA5SP356-201ENST00000515972 94 ntBASIC3.12□□□□□ -1.91
CIITAP33076 MIR892C-201ENST00000516410 77 ntBASIC3.12□□□□□ -1.91
CIITAP33076 Y_RNA.718-201ENST00000517110 102 ntBASIC3.12□□□□□ -1.91
CIITAP33076 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.12□□□□□ -1.91
CIITAP33076 APOOP3-201ENST00000536787 586 ntBASIC3.12□□□□□ -1.91
CIITAP33076 AC025423.5-201ENST00000550230 219 ntBASIC3.12□□□□□ -1.91
CIITAP33076 MIR3605-201ENST00000583214 100 ntBASIC3.12□□□□□ -1.91
CIITAP33076 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.12□□□□□ -1.91
CIITAP33076 ZNF861P-201ENST00000588126 639 ntBASIC3.12□□□□□ -1.91
CIITAP33076 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.12□□□□□ -1.91
CIITAP33076 AC123912.5-201ENST00000605470 343 ntBASIC3.12□□□□□ -1.91
CIITAP33076 AL627309.6-201ENST00000606857 840 ntBASIC3.12□□□□□ -1.91
CIITAP33076 FTX_3.1-201ENST00000610451 147 ntBASIC3.12□□□□□ -1.91
CIITAP33076 MTND4LP32-201ENST00000636111 270 ntBASIC3.12□□□□□ -1.91
CIITAP33076 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.12□□□□□ -1.91
CIITAP33076 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CIITAP33076 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CIITAP33076 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.11□□□□□ -1.91
CIITAP33076 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CIITAP33076 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CIITAP33076 RPL9P7-201ENST00000330965 580 ntBASIC3.11□□□□□ -1.91
CIITAP33076 RNU6-562P-201ENST00000362731 107 ntBASIC3.11□□□□□ -1.91
CIITAP33076 Y_RNA.259-201ENST00000364619 101 ntBASIC3.11□□□□□ -1.91
CIITAP33076 SNORA51.4-201ENST00000364993 124 ntBASIC3.11□□□□□ -1.91
CIITAP33076 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CIITAP33076 XGY1-201ENST00000381172 446 ntBASIC3.11□□□□□ -1.91
CIITAP33076 Y_RNA.384-201ENST00000383909 102 ntBASIC3.11□□□□□ -1.91
CIITAP33076 RNU6-128P-201ENST00000383976 107 ntBASIC3.11□□□□□ -1.91
CIITAP33076 RNU6-1011P-201ENST00000384668 107 ntBASIC3.11□□□□□ -1.91
CIITAP33076 RNU6-95P-201ENST00000384697 107 ntBASIC3.11□□□□□ -1.91
CIITAP33076 SNORD73A-201ENST00000386062 65 ntBASIC3.11□□□□□ -1.91
CIITAP33076 AC093151.1-201ENST00000427711 313 ntBASIC3.11□□□□□ -1.91
CIITAP33076 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.11□□□□□ -1.91
CIITAP33076 AL359672.1-201ENST00000442302 409 ntBASIC3.11□□□□□ -1.91
CIITAP33076 AC107399.1-201ENST00000451226 265 ntBASIC3.11□□□□□ -1.91
CIITAP33076 RPL12P25-201ENST00000455592 494 ntBASIC3.11□□□□□ -1.91
CIITAP33076 AL583843.1-201ENST00000456070 346 ntBASIC3.11□□□□□ -1.91
CIITAP33076 RNU7-138P-201ENST00000459479 64 ntBASIC3.11□□□□□ -1.91
CIITAP33076 AC090525.1-201ENST00000479116 478 ntBASIC3.11□□□□□ -1.91
CIITAP33076 RPS27P27-201ENST00000498779 255 ntBASIC3.11□□□□□ -1.91
CIITAP33076 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.11□□□□□ -1.91
CIITAP33076 RNU6-559P-201ENST00000516151 98 ntBASIC3.11□□□□□ -1.91
CIITAP33076 RNU6-56P-201ENST00000516986 93 ntBASIC3.11□□□□□ -1.91
CIITAP33076 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms