Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 RNU6-1159P-201ENST00000362933 107 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 SET-203ENST00000372688 801 ntTSL 2 BASIC2.81□□□□□ -1.96
TM4SF1P30408 SNORA26.9-201ENST00000391322 122 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 AC138623.1-201ENST00000418060 216 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.81□□□□□ -1.96
TM4SF1P30408 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.81□□□□□ -1.96
TM4SF1P30408 MICF-203ENST00000432679 129 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.81□□□□□ -1.96
TM4SF1P30408 HMGB1P31-201ENST00000437242 427 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 SEPT14P3-201ENST00000439401 183 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.81□□□□□ -1.96
TM4SF1P30408 AL732372.2-207ENST00000445840 183 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 SEPT14P2-201ENST00000453405 183 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 RN7SL499P-201ENST00000481141 276 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 AC023141.11-201ENST00000508864 202 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 AC009646.1-201ENST00000510455 318 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.81□□□□□ -1.96
TM4SF1P30408 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.81□□□□□ -1.96
TM4SF1P30408 SEPT14P4-201ENST00000513445 186 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 RNA5SP401-201ENST00000515920 127 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 RNU2-69P-201ENST00000516061 100 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 SNORA31.6-201ENST00000516241 130 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 RNU6-720P-201ENST00000516363 108 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 RNU5B-3P-201ENST00000516601 115 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 SCARNA3-201ENST00000517097 143 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 FO082796.1-201ENST00000523795 183 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.81□□□□□ -1.96
TM4SF1P30408 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.81□□□□□ -1.96
TM4SF1P30408 ZNF519P2-201ENST00000557032 169 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 HMGB1P33-201ENST00000563485 527 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.81□□□□□ -1.96
TM4SF1P30408 AC025678.1-201ENST00000567861 338 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.81□□□□□ -1.96
TM4SF1P30408 BNIP3P30-201ENST00000601184 574 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 AC004492.1-201ENST00000607036 742 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 AC093788.1-201ENST00000609356 927 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 MTND4P27-201ENST00000450813 1354 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 AL354685.2-201ENST00000448218 1447 ntBASIC2.81□□□□□ -1.96
TM4SF1P30408 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
TM4SF1P30408 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.8□□□□□ -1.96
TM4SF1P30408 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
TM4SF1P30408 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.8□□□□□ -1.96
TM4SF1P30408 Y_RNA.324-201ENST00000365165 102 ntBASIC2.8□□□□□ -1.96
TM4SF1P30408 Y_RNA.381-201ENST00000365666 102 ntBASIC2.8□□□□□ -1.96
TM4SF1P30408 SNORA69-201ENST00000383895 132 ntBASIC2.8□□□□□ -1.96
TM4SF1P30408 Y_RNA.399-201ENST00000383955 105 ntBASIC2.8□□□□□ -1.96
TM4SF1P30408 SNORD116-20-201ENST00000384529 92 ntBASIC2.8□□□□□ -1.96
TM4SF1P30408 MIR181A1-201ENST00000385026 110 ntBASIC2.8□□□□□ -1.96
TM4SF1P30408 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
TM4SF1P30408 RNA5SP213-201ENST00000391031 106 ntBASIC2.8□□□□□ -1.96
TM4SF1P30408 RNA5SP247-201ENST00000411181 105 ntBASIC2.8□□□□□ -1.96
TM4SF1P30408 OR9R1P-201ENST00000412200 877 ntBASIC2.8□□□□□ -1.96
TM4SF1P30408 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.8□□□□□ -1.96
TM4SF1P30408 ARL5AP1-201ENST00000418991 388 ntBASIC2.8□□□□□ -1.96
TM4SF1P30408 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.8□□□□□ -1.96
TM4SF1P30408 AL445687.1-201ENST00000439946 251 ntBASIC2.8□□□□□ -1.96
TM4SF1P30408 CALM1P1-201ENST00000442082 433 ntBASIC2.8□□□□□ -1.96
TM4SF1P30408 RNU7-167P-201ENST00000459160 62 ntBASIC2.8□□□□□ -1.96
TM4SF1P30408 AL121769.1-201ENST00000469473 401 ntBASIC2.8□□□□□ -1.96
TM4SF1P30408 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.8□□□□□ -1.96
TM4SF1P30408 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.8□□□□□ -1.96
TM4SF1P30408 AL356280.1-201ENST00000603614 379 ntBASIC2.8□□□□□ -1.96
TM4SF1P30408 AC138627.2-201ENST00000624202 601 ntBASIC2.8□□□□□ -1.96
TM4SF1P30408 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.8□□□□□ -1.96
TM4SF1P30408 AC080128.1-201ENST00000474389 1917 ntBASIC2.8□□□□□ -1.96
TM4SF1P30408 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.79□□□□□ -1.96
TM4SF1P30408 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TM4SF1P30408 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
TM4SF1P30408 RNU6-487P-201ENST00000365430 104 ntBASIC2.79□□□□□ -1.96
TM4SF1P30408 CIR1P3-201ENST00000405137 479 ntBASIC2.79□□□□□ -1.96
TM4SF1P30408 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.79□□□□□ -1.96
TM4SF1P30408 RNU2-2P-201ENST00000410396 191 ntBASIC2.79□□□□□ -1.96
TM4SF1P30408 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.79□□□□□ -1.96
TM4SF1P30408 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TM4SF1P30408 CYCSP49-201ENST00000420810 319 ntBASIC2.79□□□□□ -1.96
TM4SF1P30408 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.79□□□□□ -1.96
TM4SF1P30408 AL589823.1-201ENST00000429577 183 ntBASIC2.79□□□□□ -1.96
TM4SF1P30408 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.79□□□□□ -1.96
TM4SF1P30408 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.79□□□□□ -1.96
TM4SF1P30408 AC124916.1-201ENST00000444020 547 ntBASIC2.79□□□□□ -1.96
TM4SF1P30408 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.79□□□□□ -1.96
TM4SF1P30408 RNU7-180P-201ENST00000459240 63 ntBASIC2.79□□□□□ -1.96
TM4SF1P30408 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.79□□□□□ -1.96
TM4SF1P30408 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.79□□□□□ -1.96
TM4SF1P30408 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.79□□□□□ -1.96
TM4SF1P30408 RNU6-295P-201ENST00000516901 104 ntBASIC2.79□□□□□ -1.96
TM4SF1P30408 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.79□□□□□ -1.96
TM4SF1P30408 AC010186.2-204ENST00000537668 439 ntBASIC2.79□□□□□ -1.96
TM4SF1P30408 CR383656.8-201ENST00000549046 145 ntBASIC2.79□□□□□ -1.96
TM4SF1P30408 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.79□□□□□ -1.96
TM4SF1P30408 AC105137.2-201ENST00000569073 466 ntBASIC2.79□□□□□ -1.96
TM4SF1P30408 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.79□□□□□ -1.96
TM4SF1P30408 EIF1P4-201ENST00000572664 335 ntBASIC2.79□□□□□ -1.96
TM4SF1P30408 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.79□□□□□ -1.96
TM4SF1P30408 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.79□□□□□ -1.96
TM4SF1P30408 AL162413.1-201ENST00000603198 110 ntBASIC2.79□□□□□ -1.96
TM4SF1P30408 AC069294.1-201ENST00000608397 350 ntBASIC2.79□□□□□ -1.96
TM4SF1P30408 U2.15-201ENST00000611544 191 ntBASIC2.79□□□□□ -1.96
TM4SF1P30408 U2.16-201ENST00000613119 191 ntBASIC2.79□□□□□ -1.96
TM4SF1P30408 U2.12-201ENST00000613778 191 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms