Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SHC1P29353 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.4□□□□□ -2.03
SHC1P29353 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.4□□□□□ -2.03
SHC1P29353 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
SHC1P29353 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.39□□□□□ -2.03
SHC1P29353 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.39□□□□□ -2.03
SHC1P29353 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.39□□□□□ -2.03
SHC1P29353 XGY1-201ENST00000381172 446 ntBASIC2.39□□□□□ -2.03
SHC1P29353 SNORD116-11-201ENST00000383882 92 ntBASIC2.39□□□□□ -2.03
SHC1P29353 Y_RNA.387-201ENST00000383918 102 ntBASIC2.39□□□□□ -2.03
SHC1P29353 Y_RNA.460-201ENST00000384255 102 ntBASIC2.39□□□□□ -2.03
SHC1P29353 MIR34A-201ENST00000385130 110 ntBASIC2.39□□□□□ -2.03
SHC1P29353 MIR9-1-201ENST00000385198 89 ntBASIC2.39□□□□□ -2.03
SHC1P29353 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SHC1P29353 RNA5SP492-201ENST00000411330 114 ntBASIC2.39□□□□□ -2.03
SHC1P29353 CYCSP33-201ENST00000414485 327 ntBASIC2.39□□□□□ -2.03
SHC1P29353 RPLP0P7-201ENST00000416050 667 ntBASIC2.39□□□□□ -2.03
SHC1P29353 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.39□□□□□ -2.03
SHC1P29353 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.39□□□□□ -2.03
SHC1P29353 AF228730.4-201ENST00000421457 183 ntBASIC2.39□□□□□ -2.03
SHC1P29353 AC009237.8-201ENST00000445492 379 ntBASIC2.39□□□□□ -2.03
SHC1P29353 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.39□□□□□ -2.03
SHC1P29353 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.39□□□□□ -2.03
SHC1P29353 KC877373.1-201ENST00000479066 408 ntBASIC2.39□□□□□ -2.03
SHC1P29353 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.39□□□□□ -2.03
SHC1P29353 RAC1P5-201ENST00000512182 576 ntBASIC2.39□□□□□ -2.03
SHC1P29353 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.39□□□□□ -2.03
SHC1P29353 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.39□□□□□ -2.03
SHC1P29353 COPS8P3-201ENST00000526024 482 ntBASIC2.39□□□□□ -2.03
SHC1P29353 AP005639.2-201ENST00000527592 928 ntBASIC2.39□□□□□ -2.03
SHC1P29353 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.39□□□□□ -2.03
SHC1P29353 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.39□□□□□ -2.03
SHC1P29353 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.39□□□□□ -2.03
SHC1P29353 AMZ2P1-203ENST00000565833 850 ntBASIC2.39□□□□□ -2.03
SHC1P29353 MIR3941-201ENST00000582572 103 ntBASIC2.39□□□□□ -2.03
SHC1P29353 AC023043.2-201ENST00000589678 1026 ntBASIC2.39□□□□□ -2.03
SHC1P29353 RPL23AP78-201ENST00000599928 470 ntBASIC2.39□□□□□ -2.03
SHC1P29353 APOOP1-201ENST00000604695 592 ntBASIC2.39□□□□□ -2.03
SHC1P29353 AC002044.1-201ENST00000606707 158 ntBASIC2.39□□□□□ -2.03
SHC1P29353 AL160413.1-201ENST00000622780 310 ntBASIC2.39□□□□□ -2.03
SHC1P29353 AL512643.1-201ENST00000635735 524 ntBASIC2.39□□□□□ -2.03
SHC1P29353 MTND4LP32-201ENST00000636111 270 ntBASIC2.39□□□□□ -2.03
SHC1P29353 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.39□□□□□ -2.03
SHC1P29353 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SHC1P29353 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SHC1P29353 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SHC1P29353 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.38□□□□□ -2.03
SHC1P29353 RNU6-859P-201ENST00000362728 107 ntBASIC2.38□□□□□ -2.03
SHC1P29353 Y_RNA.138-201ENST00000363462 102 ntBASIC2.38□□□□□ -2.03
SHC1P29353 Y_RNA.259-201ENST00000364619 101 ntBASIC2.38□□□□□ -2.03
SHC1P29353 Y_RNA.384-201ENST00000383909 102 ntBASIC2.38□□□□□ -2.03
SHC1P29353 Y_RNA.510-201ENST00000384511 114 ntBASIC2.38□□□□□ -2.03
SHC1P29353 SNORD116-29-201ENST00000384516 83 ntBASIC2.38□□□□□ -2.03
SHC1P29353 RNA5SP210-201ENST00000391034 120 ntBASIC2.38□□□□□ -2.03
SHC1P29353 RNU2-3P-201ENST00000410144 191 ntBASIC2.38□□□□□ -2.03
SHC1P29353 RPL19P1-201ENST00000411635 428 ntBASIC2.38□□□□□ -2.03
SHC1P29353 AL354751.2-201ENST00000415471 210 ntBASIC2.38□□□□□ -2.03
SHC1P29353 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.38□□□□□ -2.03
SHC1P29353 NCOR1P3-201ENST00000420479 303 ntBASIC2.38□□□□□ -2.03
SHC1P29353 SKA2P1-201ENST00000425592 390 ntBASIC2.38□□□□□ -2.03
SHC1P29353 AC007919.1-201ENST00000429380 217 ntBASIC2.38□□□□□ -2.03
SHC1P29353 ARL5AP4-201ENST00000430731 512 ntBASIC2.38□□□□□ -2.03
SHC1P29353 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.38□□□□□ -2.03
SHC1P29353 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.38□□□□□ -2.03
SHC1P29353 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.38□□□□□ -2.03
SHC1P29353 AL109933.2-201ENST00000452651 260 ntBASIC2.38□□□□□ -2.03
SHC1P29353 FABP5P15-201ENST00000453566 214 ntBASIC2.38□□□□□ -2.03
SHC1P29353 SNORD19B-201ENST00000459623 84 ntBASIC2.38□□□□□ -2.03
SHC1P29353 RPL37P6-201ENST00000460682 294 ntBASIC2.38□□□□□ -2.03
SHC1P29353 RPS20P22-201ENST00000473700 357 ntBASIC2.38□□□□□ -2.03
SHC1P29353 RPS15AP34-201ENST00000487776 387 ntBASIC2.38□□□□□ -2.03
SHC1P29353 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.38□□□□□ -2.03
SHC1P29353 MTCO1P29-201ENST00000496868 288 ntBASIC2.38□□□□□ -2.03
SHC1P29353 MTND5P5-201ENST00000503764 376 ntBASIC2.38□□□□□ -2.03
SHC1P29353 RN7SKP24-201ENST00000515888 284 ntBASIC2.38□□□□□ -2.03
SHC1P29353 SNORA25.17-201ENST00000517184 124 ntBASIC2.38□□□□□ -2.03
SHC1P29353 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.38□□□□□ -2.03
SHC1P29353 AP005597.4-201ENST00000526762 229 ntBASIC2.38□□□□□ -2.03
SHC1P29353 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.38□□□□□ -2.03
SHC1P29353 CBX3P7-201ENST00000532876 502 ntBASIC2.38□□□□□ -2.03
SHC1P29353 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.38□□□□□ -2.03
SHC1P29353 MIR4790-201ENST00000577799 79 ntBASIC2.38□□□□□ -2.03
SHC1P29353 MIR1273C-201ENST00000578669 77 ntBASIC2.38□□□□□ -2.03
SHC1P29353 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.38□□□□□ -2.03
SHC1P29353 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.38□□□□□ -2.03
SHC1P29353 AC008669.1-201ENST00000565823 2178 ntBASIC2.37□□□□□ -2.03
SHC1P29353 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SHC1P29353 AC138393.1-203ENST00000327086 343 ntBASIC2.37□□□□□ -2.03
SHC1P29353 VTRNA1-1-201ENST00000363120 99 ntBASIC2.37□□□□□ -2.03
SHC1P29353 Y_RNA.135-201ENST00000363439 95 ntBASIC2.37□□□□□ -2.03
SHC1P29353 DEFA7P-201ENST00000382676 285 ntBASIC2.37□□□□□ -2.03
SHC1P29353 RNU6-198P-201ENST00000384258 104 ntBASIC2.37□□□□□ -2.03
SHC1P29353 AL356057.2-201ENST00000403318 432 ntBASIC2.37□□□□□ -2.03
SHC1P29353 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SHC1P29353 AC074085.1-201ENST00000413598 418 ntBASIC2.37□□□□□ -2.03
SHC1P29353 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.37□□□□□ -2.03
SHC1P29353 NUP35P1-201ENST00000422734 947 ntBASIC2.37□□□□□ -2.03
SHC1P29353 RPL7P37-201ENST00000425095 738 ntBASIC2.37□□□□□ -2.03
SHC1P29353 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.37□□□□□ -2.03
SHC1P29353 FABP5P14-201ENST00000437273 393 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms