Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 AL355802.4-201ENST00000607635 548 ntBASIC0.62□□□□□ -2.31
PTPRMP28827 RNU6-28P-201ENST00000362378 107 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 RNU6-839P-201ENST00000363347 108 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 RNU6-360P-201ENST00000390944 104 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 AL606490.4-201ENST00000423117 127 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 AC139712.2-201ENST00000424302 339 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.61□□□□□ -2.31
PTPRMP28827 UBE2V2P3-201ENST00000433562 437 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
PTPRMP28827 AC026410.2-201ENST00000460281 156 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.61□□□□□ -2.31
PTPRMP28827 AC109329.1-201ENST00000518744 317 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 AP000763.2-201ENST00000540641 163 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 AC090115.3-201ENST00000553218 849 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 TRAV32-201ENST00000553993 340 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.61□□□□□ -2.31
PTPRMP28827 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.61□□□□□ -2.31
PTPRMP28827 AL133445.2-201ENST00000611191 527 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.61□□□□□ -2.31
PTPRMP28827 AL132822.1-201ENST00000617063 513 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 AC009268.2-201ENST00000621925 457 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 AC006001.4-201ENST00000622243 395 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 HSBP1P2-201ENST00000299671 229 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 SNORD56.4-201ENST00000363883 71 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 SNORA50A-201ENST00000384225 134 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 BTF3L4P3-201ENST00000418879 476 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.61□□□□□ -2.31
PTPRMP28827 GPM6BP2-201ENST00000432046 144 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 AC027119.1-201ENST00000440877 241 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 PRPS1P1-201ENST00000445305 876 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 GPM6BP1-201ENST00000446387 144 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.61□□□□□ -2.31
PTPRMP28827 MTND5P8-201ENST00000449817 1083 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 AC092001.1-201ENST00000453012 261 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 AC011005.2-201ENST00000487324 359 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 ACA59.2-201ENST00000517061 156 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 COPS8P3-201ENST00000526024 482 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.61□□□□□ -2.31
PTPRMP28827 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.61□□□□□ -2.31
PTPRMP28827 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.61□□□□□ -2.31
PTPRMP28827 AC013470.4-201ENST00000619978 986 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 AC099654.5-201ENST00000636479 350 ntBASIC0.61□□□□□ -2.31
PTPRMP28827 RNA5SP327-201ENST00000362494 101 ntBASIC0.6□□□□□ -2.31
PTPRMP28827 RNU6-1167P-201ENST00000363227 94 ntBASIC0.6□□□□□ -2.31
PTPRMP28827 MIR506-201ENST00000384998 124 ntBASIC0.6□□□□□ -2.31
PTPRMP28827 SNORD65C-201ENST00000390962 71 ntBASIC0.6□□□□□ -2.31
PTPRMP28827 AC119751.3-201ENST00000399720 670 ntBASIC0.6□□□□□ -2.31
PTPRMP28827 MRPL35P1-201ENST00000404272 572 ntBASIC0.6□□□□□ -2.31
PTPRMP28827 AC013410.2-201ENST00000422627 201 ntBASIC0.6□□□□□ -2.31
PTPRMP28827 MTND2P6-201ENST00000455337 1030 ntBASIC0.6□□□□□ -2.31
PTPRMP28827 snoU13.8-201ENST00000458890 104 ntBASIC0.6□□□□□ -2.31
PTPRMP28827 AC087477.1-201ENST00000465747 340 ntBASIC0.6□□□□□ -2.31
PTPRMP28827 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.6□□□□□ -2.31
PTPRMP28827 MTND5P13-201ENST00000513046 1079 ntBASIC0.6□□□□□ -2.31
PTPRMP28827 MTCYBP43-201ENST00000513621 740 ntBASIC0.6□□□□□ -2.31
PTPRMP28827 AC110760.3-202ENST00000515177 371 ntBASIC0.6□□□□□ -2.31
PTPRMP28827 SNORA31.17-201ENST00000516953 127 ntBASIC0.6□□□□□ -2.31
PTPRMP28827 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.6□□□□□ -2.31
PTPRMP28827 AC136932.1-201ENST00000574771 208 ntBASIC0.6□□□□□ -2.31
PTPRMP28827 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.59□□□□□ -2.32
PTPRMP28827 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.59□□□□□ -2.32
PTPRMP28827 RNU1-124P-201ENST00000363861 145 ntBASIC0.59□□□□□ -2.32
PTPRMP28827 RNU1-36P-201ENST00000365130 165 ntBASIC0.59□□□□□ -2.32
PTPRMP28827 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.59□□□□□ -2.32
PTPRMP28827 RPL39P6-201ENST00000448289 150 ntBASIC0.59□□□□□ -2.32
PTPRMP28827 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.59□□□□□ -2.32
PTPRMP28827 SNORD116-28-201ENST00000516123 91 ntBASIC0.59□□□□□ -2.32
PTPRMP28827 RNVU1-2-201ENST00000516326 135 ntBASIC0.59□□□□□ -2.32
PTPRMP28827 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.59□□□□□ -2.32
PTPRMP28827 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.59□□□□□ -2.32
PTPRMP28827 AC012414.6-201ENST00000568241 401 ntBASIC0.59□□□□□ -2.32
PTPRMP28827 MIR5190-201ENST00000581537 80 ntBASIC0.59□□□□□ -2.32
PTPRMP28827 MIR4637-201ENST00000582405 84 ntBASIC0.59□□□□□ -2.32
PTPRMP28827 MIR4661-201ENST00000582720 75 ntBASIC0.59□□□□□ -2.32
PTPRMP28827 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.59□□□□□ -2.32
PTPRMP28827 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.59□□□□□ -2.32
PTPRMP28827 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.59□□□□□ -2.32
PTPRMP28827 RNU6-359P-201ENST00000365466 108 ntBASIC0.58□□□□□ -2.32
PTPRMP28827 SNORA4.3-201ENST00000365564 137 ntBASIC0.58□□□□□ -2.32
PTPRMP28827 RNU6-439P-201ENST00000384188 106 ntBASIC0.58□□□□□ -2.32
PTPRMP28827 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.58□□□□□ -2.32
PTPRMP28827 TAF13P2-201ENST00000416876 286 ntBASIC0.58□□□□□ -2.32
PTPRMP28827 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.58□□□□□ -2.32
PTPRMP28827 RPS27P16-201ENST00000425758 201 ntBASIC0.58□□□□□ -2.32
PTPRMP28827 AL035666.1-201ENST00000446195 348 ntBASIC0.58□□□□□ -2.32
PTPRMP28827 RPL37P6-201ENST00000460682 294 ntBASIC0.58□□□□□ -2.32
PTPRMP28827 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.58□□□□□ -2.32
PTPRMP28827 RPL7P43-201ENST00000478876 753 ntBASIC0.58□□□□□ -2.32
PTPRMP28827 AC010409.1-201ENST00000487382 476 ntBASIC0.58□□□□□ -2.32
PTPRMP28827 AC091860.1-201ENST00000505723 432 ntBASIC0.58□□□□□ -2.32
PTPRMP28827 RNU6-758P-201ENST00000516292 89 ntBASIC0.58□□□□□ -2.32
PTPRMP28827 AP006587.4-201ENST00000526053 529 ntBASIC0.58□□□□□ -2.32
PTPRMP28827 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.58□□□□□ -2.32
PTPRMP28827 AC022616.8-201ENST00000533569 253 ntBASIC0.58□□□□□ -2.32
PTPRMP28827 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.58□□□□□ -2.32
PTPRMP28827 AC112220.3-201ENST00000605502 502 ntBASIC0.58□□□□□ -2.32
PTPRMP28827 AC024060.1-201ENST00000607052 494 ntBASIC0.58□□□□□ -2.32
PTPRMP28827 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms